RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 PAXBP1Q9Y5B6 917 aa13.11□□□□□ -0.31
SMAD3-202ENST00000439724 FRMPD4Q14CM0 1322 aa13.11□□□□□ -0.31
SMAD3-202ENST00000439724 RLFQ13129 1914 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 MEIS1O00470 390 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 FLOT1O75955 427 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 MUTP22033 750 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 DNM2P50570 870 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 BACE1P56817 501 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 UBXN1Q04323 297 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 LRCH2Q5VUJ6 765 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 OTOP1Q7RTM1 612 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 NIPA1Q7RTP0 329 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 KRT26Q7Z3Y9 468 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 MYOCDQ8IZQ8 938 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 ZNF280CQ8ND82 737 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 WRNIP1Q96S55 665 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 EIF2AK1Q9BQI3 630 aaKnown RBP13.1□□□□□ -0.31
SMAD3-202ENST00000439724 TUBGCP2Q9BSJ2 902 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 WDR11Q9BZH6 1224 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 RPAP3Q9H6T3 665 aaPredicted RBP13.1□□□□□ -0.31
SMAD3-202ENST00000439724 GGA3Q9NZ52 723 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 PCDHA2Q9Y5H9 948 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 SSC5DA1L4H1 1573 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 LOXHD1Q8IVV2 1947 aa13.1□□□□□ -0.31
SMAD3-202ENST00000439724 GOLGA6L9A6NEM1 432 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 EML1O00423 815 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 NFIBO00712 420 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 ZSCAN12O43309 604 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 EYA4O95677 639 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 BCRP11274 1271 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 PTPRAP18433 802 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 CASP14P31944 242 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 FXR1P51114 621 aaKnown RBP eCLIP13.09□□□□□ -0.31
SMAD3-202ENST00000439724 SPP2Q13103 211 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 ZCWPW2Q504Y3 356 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 ARSHQ5FYA8 562 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 NOL9Q5SY16 702 aaKnown RBP13.09□□□□□ -0.31
SMAD3-202ENST00000439724 ARHGAP27Q6ZUM4 889 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 CREBRFQ8IUR6 639 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 TSG101Q99816 390 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 HSD17B14Q9BPX1 270 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 MXRA8Q9BRK3 442 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 PICK1Q9NRD5 415 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 COL20A1Q9P218 1284 aa13.09□□□□□ -0.31
SMAD3-202ENST00000439724 C19orf81C9J6K1 198 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 DYNC1I1O14576 645 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 GAS7O60861 476 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 ZBED4O75132 1171 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 KIF20AO95235 890 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 ALAS1P13196 640 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 PSMC6P62333 389 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 UBXN2AP68543 259 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 PABPC4Q13310 644 aaKnown RBP eCLIP13.08□□□□□ -0.31
SMAD3-202ENST00000439724 DGKZQ13574 1117 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 B3GNT9Q6UX72 402 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 LRRC55Q6ZSA7 311 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 REXO1L1PQ8IX06 675 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 CPXCR1Q8N123 301 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 KLRG1Q96E93 195 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 RIT2Q99578 217 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 SPON1Q9HCB6 807 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 RAVER2Q9HCJ3 691 aaKnown RBP13.08□□□□□ -0.31
SMAD3-202ENST00000439724 PPP2R2CQ9Y2T4 447 aa13.08□□□□□ -0.31
SMAD3-202ENST00000439724 PAPPA2Q9BXP8 1791 aa13.08□□□□□ -0.32
SMAD3-202ENST00000439724 COL11A1P12107 1806 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-202ENST00000439724 RIOK3O14730 519 aaKnown RBP13.08□□□□□ -0.32
SMAD3-202ENST00000439724 KRT18P05783 430 aaKnown RBP13.08□□□□□ -0.32
SMAD3-202ENST00000439724 ARP10275 920 aa13.08□□□□□ -0.32
SMAD3-202ENST00000439724 PRKCSHP14314 528 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-202ENST00000439724 EPS15P42566 896 aa13.08□□□□□ -0.32
SMAD3-202ENST00000439724 MTIF2P46199 727 aaKnown RBP13.08□□□□□ -0.32
SMAD3-202ENST00000439724 HIRAP54198 1017 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-202ENST00000439724 GIT2Q14161 759 aa13.08□□□□□ -0.32
SMAD3-202ENST00000439724 LRRC41Q15345 812 aa13.08□□□□□ -0.32
SMAD3-202ENST00000439724 MUM1L1Q5H9M0 696 aa13.08□□□□□ -0.32
SMAD3-202ENST00000439724 MIIPQ5JXC2 388 aa13.08□□□□□ -0.32
SMAD3-202ENST00000439724 PCNX4Q63HM2 1172 aa13.08□□□□□ -0.32
SMAD3-202ENST00000439724 GLIS3Q8NEA6 775 aa13.08□□□□□ -0.32
SMAD3-202ENST00000439724 SYTL5Q8TDW5 730 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-202ENST00000439724 CPLX3Q8WVH0 158 aa13.08□□□□□ -0.32
SMAD3-202ENST00000439724 ZKSCAN4Q969J2 545 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-202ENST00000439724 WDR90Q96KV7 1748 aa13.08□□□□□ -0.32
SMAD3-202ENST00000439724 ZNF577Q9BSK1 485 aa13.08□□□□□ -0.32
SMAD3-202ENST00000439724 TEKT3Q9BXF9 490 aa13.08□□□□□ -0.32
SMAD3-202ENST00000439724 CTDP1Q9Y5B0 961 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-202ENST00000439724 UBIAD1Q9Y5Z9 338 aa13.08□□□□□ -0.32
SMAD3-202ENST00000439724 NPHP3-ACAD11A0A0J9YXS1 232 aa13.07□□□□□ -0.32
SMAD3-202ENST00000439724 B4DLN1 442 aa13.07□□□□□ -0.32
SMAD3-202ENST00000439724 VWA5AO00534 786 aa13.07□□□□□ -0.32
SMAD3-202ENST00000439724 OAZ1P54368 228 aa13.07□□□□□ -0.32
SMAD3-202ENST00000439724 CYP4A11Q02928 519 aa13.07□□□□□ -0.32
SMAD3-202ENST00000439724 EPHA7Q15375 998 aa13.07□□□□□ -0.32
SMAD3-202ENST00000439724 SUPT20HL1Q3ZLR7 823 aa13.07□□□□□ -0.32
SMAD3-202ENST00000439724 HERC4Q5GLZ8 1057 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-202ENST00000439724 PRAMEF18Q5VWM3 479 aa13.07□□□□□ -0.32
SMAD3-202ENST00000439724 ZC3H3Q8IXZ2 948 aaKnown RBP13.07□□□□□ -0.32
SMAD3-202ENST00000439724 RETREG2Q8NC44 543 aa13.07□□□□□ -0.32
SMAD3-202ENST00000439724 KIF18AQ8NI77 898 aa13.07□□□□□ -0.32
SMAD3-202ENST00000439724 NEK9Q8TD19 979 aa13.07□□□□□ -0.32
SMAD3-202ENST00000439724 IQCDQ96DY2 449 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms