RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 TSG101Q99816 390 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 PAGR1Q9BTK6 254 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 FAM153AQ9UHL3 310 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 NFU1Q9UMS0 254 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 PCDHGC5Q9Y5F6 944 aa16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 DDX60LQ5H9U9 1706 aaKnown RBP16.83■□□□□ 0.28
CDC42EP4-202ENST00000439510 NOL4O94818 638 aa16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 NFIXQ14938 502 aa16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 CALCRLQ16602 461 aa16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 CFAP58Q5T655 872 aa16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 SOGA3Q5TF21 947 aa16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 RABEP2Q9H5N1 569 aa16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 LUC7LQ9NQ29 371 aaKnown RBP16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 NDUFAB1O14561 156 aa16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 GYS1P13807 737 aa16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 INPP5BP32019 993 aa16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 PDIA5Q14554 519 aa16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 TDRD12Q587J7 1177 aaKnown RBP16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 TXNRD3Q86VQ6 643 aa16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 SH2D3CQ8N5H7 860 aa16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 INPP4AQ96PE3 977 aaPredicted RBP16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 LRRC27Q9C0I9 530 aa16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 EPB41L5Q9HCM4 733 aa16.82■□□□□ 0.28
CDC42EP4-202ENST00000439510 PALMO75781 387 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 PPP4CP60510 307 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 GUCY2DQ02846 1103 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 TMEM119Q4V9L6 283 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 MEI1Q5TIA1 1274 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 SFMBT2Q5VUG0 894 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 GPIHBP1Q8IV16 184 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 WHAMMQ8TF30 809 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 CDK5RAP3Q96JB5 506 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 SEC63Q9UGP8 760 aaKnown RBP16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 JAG2Q9Y219 1238 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 SAMM50Q9Y512 469 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 COL4A3BPQ9Y5P4 624 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 COL24A1Q17RW2 1714 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 TMEM266Q2M3C6 531 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 FAM83BQ5T0W9 1011 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 SWT1Q5T5J6 900 aaKnown RBP16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 DDX12PQ92771 950 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 BIN2Q9UBW5 565 aaPredicted RBP16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 ATP6V0A2Q9Y487 856 aa16.81■□□□□ 0.28
CDC42EP4-202ENST00000439510 ZSCAN5CA6NGD5 496 aaPredicted RBP16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 RGL2O15211 777 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 LSP1P33241 339 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 NAP1L1P55209 391 aaKnown RBP16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 FKBP3Q00688 224 aaKnown RBP16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 TMC4Q7Z404 712 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 COL23A1Q86Y22 540 aaPredicted RBP16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 GLIS3Q8NEA6 775 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 RNPC3Q96LT9 517 aaKnown RBP16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 EPN3Q9H201 632 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 KIF13BQ9NQT8 1826 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 MYH4Q9Y623 1939 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 hCG_1984214I3L0E3 225 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 LDHBP07195 334 aaKnown RBP16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 MYBP10242 640 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 CDC37Q16543 378 aaPredicted RBP16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 SLC18A3Q16572 532 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 MSL1Q68DK7 614 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 KCTD16Q68DU8 428 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 MYOCDQ8IZQ8 938 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 ZNF713Q8N859 430 aaPredicted RBP16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 CASKIN2Q8WXE0 1202 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.8■□□□□ 0.288e-7■■■■■ 58.8
CDC42EP4-202ENST00000439510 CEP89Q96ST8 783 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 RAB34Q9BZG1 259 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 ZNF287Q9HBT7 754 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 NLRC4Q9NPP4 1024 aa16.8■□□□□ 0.28
CDC42EP4-202ENST00000439510 ESYT3A0FGR9 886 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 SLC37A4O43826 429 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 EDIL3O43854 480 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 MCTP2Q6DN12 878 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 USP17L2Q6R6M4 530 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 EIF1ADQ8N9N8 165 aaKnown RBP16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 TANGO6Q9C0B7 1094 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 TMEM260Q9NX78 707 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 CES2O00748 559 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 BAG3O95817 575 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 KLRC1P26715 233 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 ATP1A2P50993 1020 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 GSTO1P78417 241 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 SEPT2Q15019 361 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 NEDD1Q8NHV4 660 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 WDR66Q8TBY9 1149 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 TGFBRAP1Q8WUH2 860 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 IFT81Q8WYA0 676 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 AKT1S1Q96B36 256 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 PIGSQ96S52 555 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 TMEM59LQ9UK28 342 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 SRRM3A6NNA2 597 aaPredicted RBP16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 FTCDO95954 541 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 ERCC3P19447 782 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 NR1D1P20393 614 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 MARSP56192 900 aaKnown RBP16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 LRRC41Q15345 812 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 KCNK18Q7Z418 384 aa16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 YTHDF3Q7Z739 585 aaKnown RBP16.79■□□□□ 0.28
CDC42EP4-202ENST00000439510 PRPF38AQ8NAV1 312 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms