RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 NOVA2Q9UNW9 492 aaKnown RBP10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 PLAAQ9Y263 795 aa10.93□□□□□ -0.66
CDC42SE1-202ENST00000439374 LAMA4Q16363 1823 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 TAF1P21675 1872 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 TMEM110-MUSTN1A8MSY1 372 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 E9PMD0 336 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 SLC37A4O43826 429 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 AMPD2Q01433 879 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 KRT71Q3SY84 523 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 CCDC38Q502W7 563 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 PRR16Q569H4 304 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 TRIM68Q6AZZ1 485 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 TBC1D1Q86TI0 1168 aaPredicted RBP10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 MICAL1Q8TDZ2 1067 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 MRRFQ96E11 262 aaKnown RBP10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 CCT8L2Q96SF2 557 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 ADAM33Q9BZ11 813 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 DDX47Q9H0S4 455 aaKnown RBP10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 GEMIN8Q9NWZ8 242 aaKnown RBP10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 LEMD3Q9Y2U8 911 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 FLT1P17948 1338 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 FAM237AA0A1B0GTK4 181 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 ENO4A6NNW6 628 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 CTNNA1P35221 906 aaKnown RBP10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 TRAPPC10P48553 1259 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 KIF11P52732 1056 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 NAIF1Q69YI7 327 aaPredicted RBP10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 SEPT12Q8IYM1 358 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 CHORDC1Q9UHD1 332 aaPredicted RBP10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 ADAMTS1Q9UHI8 967 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 ZBTB21Q9ULJ3 1066 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 PCDHA12Q9UN75 941 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 COL18A1P39060 1754 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 SIPA1L3O60292 1781 aaPredicted RBP10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 LRRC53A6NM62 1247 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 VIMP08670 466 aaKnown RBP10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 NFIAQ12857 509 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 PABPC4Q13310 644 aaKnown RBP eCLIP10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 SPRED3Q2MJR0 410 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 NAALADL2Q58DX5 795 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 ADSSL1Q8N142 457 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 FNBP4Q8N3X1 1017 aaPredicted RBP10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 RDH13Q8NBN7 331 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 TAF4BQ92750 862 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 RAB34Q9BZG1 259 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 PSTPIP2Q9H939 334 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 LRRC4BQ9NT99 713 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 STIM2Q9P246 746 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 L3MBTL1Q9Y468 752 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 PCDHA13Q9Y5I0 950 aa10.92□□□□□ -0.66
CDC42SE1-202ENST00000439374 BAZ2AQ9UIF9 1905 aaKnown RBP10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 ATRNO75882 1429 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 DDX39AO00148 427 aaKnown RBP10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 HLA-DOAP06340 250 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 MCM3P25205 808 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 MYO1EQ12965 1108 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 ZKSCAN8Q15776 578 aaPredicted RBP10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 NT5DC1Q5TFE4 455 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 CDKAL1Q5VV42 579 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 OTUD6AQ7L8S5 288 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 ZNF473Q8WTR7 871 aaKnown RBP10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 TNFRSF25Q93038 417 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 PYM1Q9BRP8 204 aaKnown RBP10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 TRIM9Q9C026 710 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 DDX25Q9UHL0 483 aaKnown RBP10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 SALL4Q9UJQ4 1053 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 CEP83Q9Y592 693 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 TBC1D16Q8TBP0 767 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 SPIRE2Q8WWL2 714 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 TSG101Q99816 390 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 PACSIN1Q9BY11 444 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 KLC4Q9NSK0 619 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 PCDHA1Q9Y5I3 950 aa10.91□□□□□ -0.66
CDC42SE1-202ENST00000439374 MYMKA6NI61 221 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 DCDC2CA8MYV0 355 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 PALMO75781 387 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 GCKP35557 465 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 POLR2FP61218 127 aaKnown RBP10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 SH3RF1Q7Z6J0 888 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 TEX2Q8IWB9 1127 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 SLF2Q8IX21 1173 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 CCDC13Q8IYE1 715 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 DYDC1Q8WWB3 177 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 LARP4BQ92615 738 aaKnown RBP10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 DDX12PQ92771 950 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 SERPINB13Q9UIV8 391 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 DAGLAQ9Y4D2 1042 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 BICDL2A1A5D9 508 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 ZNF263O14978 683 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 MEFVO15553 781 aaPredicted RBP10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 PCP11498 1178 aaKnown RBP10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 TM4SF1P30408 202 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 DNM2P50570 870 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 LRRC14Q15048 493 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 EAPPQ56P03 285 aaPredicted RBP10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 ARL6IP4Q66PJ3 421 aaKnown RBP10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 CNNM4Q6P4Q7 775 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 NLRP14Q86W24 1093 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 ZFPM1Q8IX07 1006 aa10.9□□□□□ -0.66
CDC42SE1-202ENST00000439374 KIF2BQ8N4N8 673 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms