RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 DDX20Q9UHI6 824 aaKnown RBP14.93□□□□□ -0.02
PCNX3-202ENST00000439247 CEP83Q9Y592 693 aa14.93□□□□□ -0.02
PCNX3-202ENST00000439247 COL1A1P02452 1464 aaPredicted RBP14.93□□□□□ -0.02
PCNX3-202ENST00000439247 POLRMTO00411 1230 aaKnown RBP14.93□□□□□ -0.02
PCNX3-202ENST00000439247 FAM107AO95990 144 aa14.93□□□□□ -0.02
PCNX3-202ENST00000439247 ERVK-9P63128 1117 aa14.93□□□□□ -0.02
PCNX3-202ENST00000439247 KCNMA1Q12791 1236 aa14.93□□□□□ -0.02
PCNX3-202ENST00000439247 FAM114A1Q8IWE2 563 aa14.93□□□□□ -0.02
PCNX3-202ENST00000439247 N4BP2L2Q92802 583 aaPredicted RBP14.93□□□□□ -0.02
PCNX3-202ENST00000439247 SCLT1Q96NL6 688 aa14.93□□□□□ -0.02
PCNX3-202ENST00000439247 CCSER1Q9C0I3 900 aa14.93□□□□□ -0.02
PCNX3-202ENST00000439247 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.93□□□□□ -0.02
PCNX3-202ENST00000439247 CCNT1O60563 726 aaKnown RBP14.92□□□□□ -0.02
PCNX3-202ENST00000439247 MYCNP04198 464 aaPredicted RBP14.92□□□□□ -0.02
PCNX3-202ENST00000439247 RDXP35241 583 aaKnown RBP14.92□□□□□ -0.02
PCNX3-202ENST00000439247 MMP14P50281 582 aa14.92□□□□□ -0.02
PCNX3-202ENST00000439247 SF3B3Q15393 1217 aaKnown RBP14.92□□□□□ -0.02
PCNX3-202ENST00000439247 UAP1Q16222 522 aaPredicted RBP14.92□□□□□ -0.02
PCNX3-202ENST00000439247 C6orf89Q6UWU4 347 aa14.92□□□□□ -0.02
PCNX3-202ENST00000439247 GIMAP7Q8NHV1 300 aa14.92□□□□□ -0.02
PCNX3-202ENST00000439247 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.92□□□□□ -0.02
PCNX3-202ENST00000439247 AP1M1Q9BXS5 423 aa14.92□□□□□ -0.02
PCNX3-202ENST00000439247 M0R2N6 131 aa14.92□□□□□ -0.02
PCNX3-202ENST00000439247 CHUKO15111 745 aa14.92□□□□□ -0.02
PCNX3-202ENST00000439247 CYTH3O43739 400 aa14.92□□□□□ -0.02
PCNX3-202ENST00000439247 HSD17B3P37058 310 aa14.92□□□□□ -0.02
PCNX3-202ENST00000439247 SMTNP53814 917 aa14.92□□□□□ -0.02
PCNX3-202ENST00000439247 MICALCLQ6ZW33 695 aa14.92□□□□□ -0.02
PCNX3-202ENST00000439247 NLRP3Q96P20 1036 aa14.92□□□□□ -0.02
PCNX3-202ENST00000439247 UIMC1Q96RL1 719 aa14.92□□□□□ -0.02
PCNX3-202ENST00000439247 PDXDC1Q6P996 788 aa14.92□□□□□ -0.02
PCNX3-202ENST00000439247 TBC1D5Q92609 795 aa14.92□□□□□ -0.02
PCNX3-202ENST00000439247 MMTAG2Q9BU76 263 aaKnown RBP14.92□□□□□ -0.02
PCNX3-202ENST00000439247 TMBIM4Q9HC24 238 aa14.92□□□□□ -0.02
PCNX3-202ENST00000439247 DONSONQ9NYP3 566 aa14.92□□□□□ -0.02
PCNX3-202ENST00000439247 LRP5O75197 1615 aa14.91□□□□□ -0.02
PCNX3-202ENST00000439247 PJA2O43164 708 aa14.91□□□□□ -0.02
PCNX3-202ENST00000439247 CALML3P27482 149 aa14.91□□□□□ -0.02
PCNX3-202ENST00000439247 ECHS1P30084 290 aa14.91□□□□□ -0.02
PCNX3-202ENST00000439247 SLC15A2Q16348 729 aa14.91□□□□□ -0.02
PCNX3-202ENST00000439247 MCM8Q9UJA3 840 aa14.91□□□□□ -0.02
PCNX3-202ENST00000439247 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.91□□□□□ -0.02
PCNX3-202ENST00000439247 ATXN2Q99700 1313 aaKnown RBP14.91□□□□□ -0.02
PCNX3-202ENST00000439247 MYMKA6NI61 221 aa14.91□□□□□ -0.02
PCNX3-202ENST00000439247 PHF20L1A8MW92 1017 aa14.91□□□□□ -0.02
PCNX3-202ENST00000439247 CCDC121Q6ZUS5 278 aa14.91□□□□□ -0.02
PCNX3-202ENST00000439247 RUBCNQ92622 972 aa14.91□□□□□ -0.02
PCNX3-202ENST00000439247 DYNLL2Q96FJ2 89 aa14.91□□□□□ -0.02
PCNX3-202ENST00000439247 IL17RBQ9NRM6 502 aa14.91□□□□□ -0.02
PCNX3-202ENST00000439247 TCP11L1Q9NUJ3 509 aa14.91□□□□□ -0.02
PCNX3-202ENST00000439247 A0A087X0T9 212 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 GOLGA6L7A0A1B0GV03 622 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 USP17L3A6NCW0 530 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 USP17L4A6NCW7 530 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 USP17L8P0C7I0 530 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 FAM228BP0C875 321 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 KLRK1P26718 216 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 CDC37Q16543 378 aaPredicted RBP14.9□□□□□ -0.02
PCNX3-202ENST00000439247 GLE1Q53GS7 698 aaKnown RBP14.9□□□□□ -0.02
PCNX3-202ENST00000439247 CENPPQ6IPU0 288 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 USP17L1Q7RTZ2 530 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 BANK1Q8NDB2 785 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 CNKSR2Q8WXI2 1034 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 INPP4AQ96PE3 977 aaPredicted RBP14.9□□□□□ -0.02
PCNX3-202ENST00000439247 ADAMTS1Q9UHI8 967 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 IGHMBP2P38935 993 aaKnown RBP14.9□□□□□ -0.02
PCNX3-202ENST00000439247 POLR2FP61218 127 aaKnown RBP14.9□□□□□ -0.02
PCNX3-202ENST00000439247 BYSLQ13895 437 aaKnown RBP14.9□□□□□ -0.02
PCNX3-202ENST00000439247 MAN2A1Q16706 1144 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 ODF2Q5BJF6 829 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 CYB5D1Q6P9G0 228 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 YTHDF3Q7Z739 585 aaKnown RBP14.9□□□□□ -0.02
PCNX3-202ENST00000439247 MDM1Q8TC05 714 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 C7orf25Q9BPX7 421 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 DCP1AQ9NPI6 582 aaPredicted RBP14.9□□□□□ -0.02
PCNX3-202ENST00000439247 ODF2LQ9ULJ1 636 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 LEMD3Q9Y2U8 911 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 KCNK3O14649 394 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 NOL4O94818 638 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 ELF1P32519 619 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 TXKP42681 527 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 ZNF844Q08AG5 666 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 FUKQ8N0W3 1084 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 PNMA1Q8ND90 353 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 PAGR1Q9BTK6 254 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 BRIP1Q9BX63 1249 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 TBC1D7Q9P0N9 293 aa14.9□□□□□ -0.02
PCNX3-202ENST00000439247 TPX2Q9ULW0 747 aaKnown RBP14.9□□□□□ -0.02
PCNX3-202ENST00000439247 GMNCA6NCL1 334 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 HMGB1P1B2RPK0 211 aaPredicted RBP14.89□□□□□ -0.03
PCNX3-202ENST00000439247 H0YGN5 161 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 MMP10P09238 476 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 FGRP09769 529 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 TFAP4Q01664 338 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 KIAA0753Q2KHM9 967 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 PREPLQ4J6C6 727 aaPredicted RBP14.89□□□□□ -0.03
PCNX3-202ENST00000439247 CD302Q8IX05 232 aa14.89□□□□□ -0.03
PCNX3-202ENST00000439247 UBLCP1Q8WVY7 318 aaPredicted RBP14.89□□□□□ -0.03
PCNX3-202ENST00000439247 DDX47Q9H0S4 455 aaKnown RBP14.89□□□□□ -0.03
PCNX3-202ENST00000439247 NOVA2Q9UNW9 492 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms