RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 SENP7Q9BQF6 1050 aa23.32■■□□□ 1.32
CHD3-204ENST00000439235 SRRDQ9UH36 339 aa23.32■■□□□ 1.32
CHD3-204ENST00000439235 VAV3Q9UKW4 847 aa23.32■■□□□ 1.32
CHD3-204ENST00000439235 POTEMA6NI47 508 aa23.31■■□□□ 1.32
CHD3-204ENST00000439235 SNAI1O95863 264 aaPredicted RBP23.31■■□□□ 1.32
CHD3-204ENST00000439235 KCNA2P16389 499 aa23.31■■□□□ 1.32
CHD3-204ENST00000439235 PRMT2P55345 433 aa23.31■■□□□ 1.32
CHD3-204ENST00000439235 TTLL4Q14679 1199 aa23.31■■□□□ 1.32
CHD3-204ENST00000439235 SKOR2Q2VWA4 1001 aaPredicted RBP23.31■■□□□ 1.32
CHD3-204ENST00000439235 SPECC1Q5M775 1068 aa23.31■■□□□ 1.32
CHD3-204ENST00000439235 NCAPH2Q6IBW4 605 aa23.31■■□□□ 1.32
CHD3-204ENST00000439235 ERMNQ8TAM6 284 aa23.31■■□□□ 1.32
CHD3-204ENST00000439235 SYMPKQ92797 1274 aaKnown RBP23.31■■□□□ 1.32
CHD3-204ENST00000439235 FAM237AA0A1B0GTK4 181 aa23.3■■□□□ 1.32
CHD3-204ENST00000439235 PFKFB1P16118 471 aa23.3■■□□□ 1.32
CHD3-204ENST00000439235 UBA7P41226 1012 aa23.3■■□□□ 1.32
CHD3-204ENST00000439235 KRT76Q01546 638 aa23.3■■□□□ 1.32
CHD3-204ENST00000439235 SPIRE1Q08AE8 756 aa23.3■■□□□ 1.32
CHD3-204ENST00000439235 NEDD9Q14511 834 aa23.3■■□□□ 1.32
CHD3-204ENST00000439235 CCL14Q16627 93 aa23.3■■□□□ 1.32
CHD3-204ENST00000439235 KRT79Q5XKE5 535 aa23.3■■□□□ 1.32
CHD3-204ENST00000439235 HAUS3Q68CZ6 603 aa23.3■■□□□ 1.32
CHD3-204ENST00000439235 OTOP1Q7RTM1 612 aa23.3■■□□□ 1.32
CHD3-204ENST00000439235 CCSER1Q9C0I3 900 aa23.3■■□□□ 1.32
CHD3-204ENST00000439235 KATNBL1Q9H079 304 aa23.3■■□□□ 1.32
CHD3-204ENST00000439235 FLRT1Q9NZU1 646 aa23.3■■□□□ 1.32
CHD3-204ENST00000439235 TSKSQ9UJT2 592 aa23.3■■□□□ 1.32
CHD3-204ENST00000439235 ZHX1Q9UKY1 873 aaPredicted RBP23.3■■□□□ 1.32
CHD3-204ENST00000439235 A0A1B0GVL5 298 aa23.29■■□□□ 1.32
CHD3-204ENST00000439235 RBM47A0AV96 593 aaKnown RBP23.29■■□□□ 1.32
CHD3-204ENST00000439235 DHX15O43143 795 aaKnown RBP23.29■■□□□ 1.32
CHD3-204ENST00000439235 SLC26A4O43511 780 aa23.29■■□□□ 1.32
CHD3-204ENST00000439235 ATP9AO75110 1047 aa23.29■■□□□ 1.32
CHD3-204ENST00000439235 UBA1P22314 1058 aaKnown RBP23.29■■□□□ 1.32
CHD3-204ENST00000439235 FAM160A1Q05DH4 1040 aa23.29■■□□□ 1.32
CHD3-204ENST00000439235 ACVR2BQ13705 512 aa23.29■■□□□ 1.32
CHD3-204ENST00000439235 MFSD14CQ5VZR4 134 aa23.29■■□□□ 1.32
CHD3-204ENST00000439235 CABP7Q86V35 215 aa23.29■■□□□ 1.32
CHD3-204ENST00000439235 PYM1Q9BRP8 204 aaKnown RBP23.29■■□□□ 1.32
CHD3-204ENST00000439235 UNC45AQ9H3U1 944 aa23.29■■□□□ 1.32
CHD3-204ENST00000439235 GOLPH3LQ9H4A5 285 aa23.29■■□□□ 1.32
CHD3-204ENST00000439235 NRBP1Q9UHY1 535 aa23.29■■□□□ 1.32
CHD3-204ENST00000439235 HPSEQ9Y251 543 aa23.29■■□□□ 1.32
CHD3-204ENST00000439235 PP2D1A8MPX8 630 aa23.28■■□□□ 1.32
CHD3-204ENST00000439235 DDX39AO00148 427 aaKnown RBP23.28■■□□□ 1.32
CHD3-204ENST00000439235 CHMP2AO43633 222 aa23.28■■□□□ 1.32
CHD3-204ENST00000439235 IGHA2P01877 340 aa23.28■■□□□ 1.32
CHD3-204ENST00000439235 JAK3P52333 1124 aa23.28■■□□□ 1.32
CHD3-204ENST00000439235 CAP1Q01518 475 aa23.28■■□□□ 1.32
CHD3-204ENST00000439235 ZNF746Q6NUN9 644 aaPredicted RBP23.28■■□□□ 1.32
CHD3-204ENST00000439235 TAPT1Q6NXT6 567 aa23.28■■□□□ 1.32
CHD3-204ENST00000439235 B3GNT9Q6UX72 402 aa23.28■■□□□ 1.32
CHD3-204ENST00000439235 RASSF8Q8NHQ8 419 aa23.28■■□□□ 1.32
CHD3-204ENST00000439235 GPT2Q8TD30 523 aa23.28■■□□□ 1.32
CHD3-204ENST00000439235 SNX29Q8TEQ0 813 aa23.28■■□□□ 1.32
CHD3-204ENST00000439235 EPSTI1Q96J88 318 aa23.28■■□□□ 1.32
CHD3-204ENST00000439235 JPH1Q9HDC5 661 aaPredicted RBP23.28■■□□□ 1.32
CHD3-204ENST00000439235 CCDC39Q9UFE4 941 aa23.28■■□□□ 1.32
CHD3-204ENST00000439235 DDX41Q9UJV9 622 aaKnown RBP23.28■■□□□ 1.32
CHD3-204ENST00000439235 KCNH3Q9ULD8 1083 aa23.28■■□□□ 1.32
CHD3-204ENST00000439235 KDM3AQ9Y4C1 1321 aa23.28■■□□□ 1.32
CHD3-204ENST00000439235 CASP8AP2Q9UKL3 1982 aa23.27■■□□□ 1.32
CHD3-204ENST00000439235 TXNP10599 105 aaKnown RBP23.27■■□□□ 1.32
CHD3-204ENST00000439235 LIG1P18858 919 aa23.27■■□□□ 1.32
CHD3-204ENST00000439235 SFNP31947 248 aa23.27■■□□□ 1.32
CHD3-204ENST00000439235 CYP2C19P33261 490 aa23.27■■□□□ 1.32
CHD3-204ENST00000439235 SYKP43405 635 aa23.27■■□□□ 1.32
CHD3-204ENST00000439235 NDUFA8P51970 172 aa23.27■■□□□ 1.32
CHD3-204ENST00000439235 KLHL40Q2TBA0 621 aa23.27■■□□□ 1.32
CHD3-204ENST00000439235 CCDC62Q6P9F0 684 aa23.27■■□□□ 1.32
CHD3-204ENST00000439235 USP49Q70CQ1 688 aa23.27■■□□□ 1.32
CHD3-204ENST00000439235 MIER3Q7Z3K6 550 aa23.27■■□□□ 1.32
CHD3-204ENST00000439235 RDM1Q8NG50 284 aa23.27■■□□□ 1.32
CHD3-204ENST00000439235 CALML4Q96GE6 196 aa23.27■■□□□ 1.32
CHD3-204ENST00000439235 SLC9A2Q9UBY0 812 aa23.27■■□□□ 1.32
CHD3-204ENST00000439235 KIAA1217Q5T5P2 1943 aa23.26■■□□□ 1.31
CHD3-204ENST00000439235 WDR64B1ANS9 1081 aa23.26■■□□□ 1.31
CHD3-204ENST00000439235 GGPS1O95749 300 aa23.26■■□□□ 1.31
CHD3-204ENST00000439235 SMAP1Q8IYB5 467 aaPredicted RBP23.26■■□□□ 1.31
CHD3-204ENST00000439235 RAET1EQ8TD07 263 aa23.26■■□□□ 1.31
CHD3-204ENST00000439235 NEK9Q8TD19 979 aa23.26■■□□□ 1.31
CHD3-204ENST00000439235 TRIB2Q92519 343 aa23.26■■□□□ 1.31
CHD3-204ENST00000439235 CDK5RAP3Q96JB5 506 aa23.26■■□□□ 1.31
CHD3-204ENST00000439235 PDGFCQ9NRA1 345 aa23.26■■□□□ 1.31
CHD3-204ENST00000439235 NKRFO15226 690 aaKnown RBP eCLIP23.25■■□□□ 1.31
CHD3-204ENST00000439235 TRAK2O60296 914 aa23.25■■□□□ 1.31
CHD3-204ENST00000439235 ARIH2O95376 493 aa23.25■■□□□ 1.31
CHD3-204ENST00000439235 CDC25AP30304 524 aa23.25■■□□□ 1.31
CHD3-204ENST00000439235 CCT6AP40227 531 aaKnown RBP23.25■■□□□ 1.31
CHD3-204ENST00000439235 SP2Q02086 613 aa23.25■■□□□ 1.31
CHD3-204ENST00000439235 EPHA7Q15375 998 aa23.25■■□□□ 1.31
CHD3-204ENST00000439235 LY6KQ17RY6 165 aa23.25■■□□□ 1.31
CHD3-204ENST00000439235 IQSEC1Q6DN90 963 aa23.25■■□□□ 1.31
CHD3-204ENST00000439235 METTL7BQ6UX53 244 aa23.25■■□□□ 1.31
CHD3-204ENST00000439235 CYFIP1Q7L576 1253 aa23.25■■□□□ 1.31
CHD3-204ENST00000439235 FMR1NBQ8N0W7 255 aaPredicted RBP23.25■■□□□ 1.31
CHD3-204ENST00000439235 ENGASEQ8NFI3 743 aa23.25■■□□□ 1.31
CHD3-204ENST00000439235 MLXIPQ9HAP2 919 aa23.25■■□□□ 1.31
CHD3-204ENST00000439235 DDX19AQ9NUU7 478 aaKnown RBP23.25■■□□□ 1.31
CHD3-204ENST00000439235 SAMM50Q9Y512 469 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms