RNA–Protein interactions for RNA: ENST00000438828.3

CARF-213, Transcript of calcium responsive transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CARF, Length 3,574 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARF-213ENST00000438828 USP17L3A6NCW0 530 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 USP17L4A6NCW7 530 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 TRIM37O94972 964 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 SERPING1P05155 500 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 EIF6P56537 245 aaKnown RBP13.4□□□□□ -0.26
CARF-213ENST00000438828 ITGB3BPQ13352 177 aaPredicted RBP13.4□□□□□ -0.26
CARF-213ENST00000438828 KCNB1Q14721 858 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 CALCRLQ16602 461 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 PPP4R3AQ6IN85 833 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 USP17L1Q7RTZ2 530 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 CCDC24Q8N4L8 307 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 FMO2Q99518 471 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 OSBPL7Q9BZF2 842 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 PPP1R12CQ9BZL4 782 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 TMBIM4Q9HC24 238 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 SPATS2LQ9NUQ6 558 aaKnown RBP13.4□□□□□ -0.26
CARF-213ENST00000438828 CNTNAP5Q8WYK1 1306 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 FGGP02679 453 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 SATB1Q01826 763 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 ZNF211Q13398 564 aaPredicted RBP13.4□□□□□ -0.26
CARF-213ENST00000438828 SEC23AQ15436 765 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 NAALADL2Q58DX5 795 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 CTNNBL1Q8WYA6 563 aaPredicted RBP13.4□□□□□ -0.26
CARF-213ENST00000438828 LARP4BQ92615 738 aaKnown RBP13.4□□□□□ -0.26
CARF-213ENST00000438828 ERGIC2Q96RQ1 377 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 DNAJC17Q9NVM6 304 aaKnown RBP13.4□□□□□ -0.26
CARF-213ENST00000438828 NIP7Q9Y221 180 aaKnown RBP eCLIP13.4□□□□□ -0.26
CARF-213ENST00000438828 CRYBG1Q9Y4K1 1723 aa13.4□□□□□ -0.26
CARF-213ENST00000438828 CHRNDQ07001 517 aa13.4□□□□□ -0.27
CARF-213ENST00000438828 NBPF9Q3BBW0 867 aa13.4□□□□□ -0.27
CARF-213ENST00000438828 TRMT1LQ7Z2T5 733 aaKnown RBP13.4□□□□□ -0.27
CARF-213ENST00000438828 SEMA6BQ9H3T3 888 aa13.4□□□□□ -0.27
CARF-213ENST00000438828 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.4□□□□□ -0.272e-7■■■■■ 30.3
CARF-213ENST00000438828 MCM8Q9UJA3 840 aa13.4□□□□□ -0.27
CARF-213ENST00000438828 NOC2LQ9Y3T9 749 aaKnown RBP13.4□□□□□ -0.27
CARF-213ENST00000438828 RICTORQ6R327 1708 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 MPHOSPH10O00566 681 aaKnown RBP13.39□□□□□ -0.27
CARF-213ENST00000438828 USP17L8P0C7I0 530 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 CHN1P15882 459 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 KCNQ4P56696 695 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 AP1ARQ63HQ0 302 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 USP38Q8NB14 1042 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 GDAP1Q8TB36 358 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 TBCKQ8TEA7 893 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 MRRFQ96E11 262 aaKnown RBP13.39□□□□□ -0.27
CARF-213ENST00000438828 KIF9Q9HAQ2 790 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 PTPN22Q9Y2R2 807 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 ACTN1P12814 892 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 ITGA4P13612 1032 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 ATP11AP98196 1134 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 ZNF844Q08AG5 666 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 BIRC3Q13489 604 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 RNF10Q8N5U6 811 aaKnown RBP13.39□□□□□ -0.27
CARF-213ENST00000438828 AZI2Q9H6S1 392 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 CPSF2Q9P2I0 782 aaKnown RBP13.39□□□□□ -0.27
CARF-213ENST00000438828 MST1RQ04912 1400 aa13.39□□□□□ -0.27
CARF-213ENST00000438828 KLRF2D3W0D1 207 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 UPP2O95045 317 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 CSF1RP07333 972 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 PPP1R2P41236 205 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 GNAQP50148 359 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 SESN3P58005 492 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 SPRED3Q2MJR0 410 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 ALKBH5Q6P6C2 394 aaKnown RBP13.38□□□□□ -0.27
CARF-213ENST00000438828 NEK8Q86SG6 692 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 LMBR1Q8WVP7 490 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 GJA10Q969M2 543 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 COL4A3BPQ9Y5P4 624 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 IL2RBP14784 551 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 ADAM9Q13443 819 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 CUL1Q13616 776 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 MIIPQ5JXC2 388 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 FAM26FQ5R3K3 315 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 GLIS3Q8NEA6 775 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 CUL5Q93034 780 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 PRMT1Q99873 361 aaKnown RBP13.38□□□□□ -0.27
CARF-213ENST00000438828 RGPD8O14715 1765 aaPredicted RBP13.38□□□□□ -0.27
CARF-213ENST00000438828 ANP32DO95626 131 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 H2AFZP0C0S5 128 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 GNA11P29992 359 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 VPS41P49754 854 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 FKBP3Q00688 224 aaKnown RBP13.38□□□□□ -0.27
CARF-213ENST00000438828 GNPTABQ3T906 1256 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 NUGGCQ68CJ6 796 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 H2AFVQ71UI9 128 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 DDX12PQ92771 950 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 XPO6Q96QU8 1125 aaKnown RBP13.38□□□□□ -0.27
CARF-213ENST00000438828 ARPP21Q9UBL0 812 aaPredicted RBP13.38□□□□□ -0.27
CARF-213ENST00000438828 ATP6V0A2Q9Y487 856 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 PCDHB13Q9Y5F0 798 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 NRXN3Q9Y4C0 1643 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 LAMA4Q16363 1823 aa13.38□□□□□ -0.27
CARF-213ENST00000438828 H0Y3Z8 333 aa13.37□□□□□ -0.27
CARF-213ENST00000438828 CETN3O15182 167 aa13.37□□□□□ -0.27
CARF-213ENST00000438828 FLOT1O75955 427 aa13.37□□□□□ -0.27
CARF-213ENST00000438828 PRLRP16471 622 aa13.37□□□□□ -0.27
CARF-213ENST00000438828 FLT3P36888 993 aa13.37□□□□□ -0.27
CARF-213ENST00000438828 DDR1Q08345 913 aa13.37□□□□□ -0.27
CARF-213ENST00000438828 CAPRIN2Q6IMN6 1127 aaKnown RBP13.37□□□□□ -0.27
CARF-213ENST00000438828 VSIG1Q86XK7 387 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms