RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 OSBPL7Q9BZF2 842 aa10.14□□□□□ -0.79
SCRN1-208ENST00000438497 LRRCC1Q9C099 1032 aa10.14□□□□□ -0.79
SCRN1-208ENST00000438497 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.14□□□□□ -0.79
SCRN1-208ENST00000438497 CACNA1AO00555 2505 aa10.14□□□□□ -0.79
SCRN1-208ENST00000438497 SMARCA5O60264 1052 aaPredicted RBP10.13□□□□□ -0.79
SCRN1-208ENST00000438497 TOP1P11387 765 aaKnown RBP10.13□□□□□ -0.79
SCRN1-208ENST00000438497 NOVP48745 357 aa10.13□□□□□ -0.79
SCRN1-208ENST00000438497 COASYQ13057 564 aa10.13□□□□□ -0.79
SCRN1-208ENST00000438497 EFHBQ8N7U6 833 aa10.13□□□□□ -0.79
SCRN1-208ENST00000438497 PPTC7Q8NI37 304 aa10.13□□□□□ -0.79
SCRN1-208ENST00000438497 SYTL5Q8TDW5 730 aaPredicted RBP10.13□□□□□ -0.79
SCRN1-208ENST00000438497 APBB2Q92870 758 aa10.13□□□□□ -0.79
SCRN1-208ENST00000438497 ASIC4Q96FT7 647 aa10.13□□□□□ -0.79
SCRN1-208ENST00000438497 RIPOR3Q96MK2 946 aa10.13□□□□□ -0.79
SCRN1-208ENST00000438497 RMDN3Q96TC7 470 aa10.13□□□□□ -0.79
SCRN1-208ENST00000438497 PHF7Q9BWX1 381 aaPredicted RBP10.13□□□□□ -0.79
SCRN1-208ENST00000438497 MAF1Q9H063 256 aa10.13□□□□□ -0.79
SCRN1-208ENST00000438497 RNPEPQ9H4A4 650 aa10.13□□□□□ -0.79
SCRN1-208ENST00000438497 CLEC1BQ9P126 229 aa10.13□□□□□ -0.79
SCRN1-208ENST00000438497 PLAGL2Q9UPG8 496 aa10.13□□□□□ -0.79
SCRN1-208ENST00000438497 MRVI1Q9Y6F6 885 aa10.13□□□□□ -0.79
SCRN1-208ENST00000438497 PLXNA3P51805 1871 aa10.13□□□□□ -0.79
SCRN1-208ENST00000438497 WDR19Q8NEZ3 1342 aa10.12□□□□□ -0.79
SCRN1-208ENST00000438497 PRR23AA6NEV1 266 aa10.12□□□□□ -0.79
SCRN1-208ENST00000438497 TREHO43280 583 aa10.12□□□□□ -0.79
SCRN1-208ENST00000438497 GALR2O43603 387 aaPredicted RBP10.12□□□□□ -0.79
SCRN1-208ENST00000438497 SORBS3O60504 671 aa10.12□□□□□ -0.79
SCRN1-208ENST00000438497 KDM4AO75164 1064 aa10.12□□□□□ -0.79
SCRN1-208ENST00000438497 NR3C2P08235 984 aa10.12□□□□□ -0.79
SCRN1-208ENST00000438497 CTSHP09668 335 aa10.12□□□□□ -0.79
SCRN1-208ENST00000438497 CAMK1Q14012 370 aa10.12□□□□□ -0.79
SCRN1-208ENST00000438497 BTG3Q14201 252 aaPredicted RBP10.12□□□□□ -0.79
SCRN1-208ENST00000438497 ARHGEF16Q5VV41 709 aa10.12□□□□□ -0.79
SCRN1-208ENST00000438497 MYSM1Q5VVJ2 828 aa10.12□□□□□ -0.79
SCRN1-208ENST00000438497 RBM23Q86U06 439 aaKnown RBP10.12□□□□□ -0.79
SCRN1-208ENST00000438497 CLP1Q92989 425 aaKnown RBP10.12□□□□□ -0.79
SCRN1-208ENST00000438497 SPATA33Q96N06 139 aa10.12□□□□□ -0.79
SCRN1-208ENST00000438497 PLVAPQ9BX97 442 aa10.12□□□□□ -0.79
SCRN1-208ENST00000438497 TOMM22Q9NS69 142 aa10.12□□□□□ -0.79
SCRN1-208ENST00000438497 RBM19Q9Y4C8 960 aaKnown RBP10.12□□□□□ -0.79
SCRN1-208ENST00000438497 USP15Q9Y4E8 981 aaPredicted RBP10.12□□□□□ -0.79
SCRN1-208ENST00000438497 ATG2AQ2TAZ0 1938 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 RIF1Q5UIP0 2472 aaKnown RBP10.11□□□□□ -0.79
SCRN1-208ENST00000438497 H3BRB1 525 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 ENPP3O14638 875 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 CAND2O75155 1236 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 PDGFBP01127 241 aaPredicted RBP10.11□□□□□ -0.79
SCRN1-208ENST00000438497 MMP1P03956 469 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 LINC00271P0C7V0 271 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 PDHBP11177 359 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 GNAT1P11488 350 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 MS4A1P11836 297 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 EIF2AK2P19525 551 aaKnown RBP10.11□□□□□ -0.79
SCRN1-208ENST00000438497 ICAM3P32942 547 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 NBL1P41271 181 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 NRIP1P48552 1158 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 HSDL1Q3SXM5 330 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 NAALADL2Q58DX5 795 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 KCNV1Q6PIU1 500 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 ADGRD2Q7Z7M1 963 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 ZBTB33Q86T24 672 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 MCF2L2Q86YR7 1114 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 SMRP1Q8NCR6 262 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 SPPL3Q8TCT6 385 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 P2RX5Q93086 422 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 C16orf70Q9BSU1 422 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 UBA5Q9GZZ9 404 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 TUT1Q9H6E5 874 aaKnown RBP10.11□□□□□ -0.79
SCRN1-208ENST00000438497 COL20A1Q9P218 1284 aa10.11□□□□□ -0.79
SCRN1-208ENST00000438497 CACNA1HO95180 2353 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 COL4A6Q14031 1691 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 ORC4O43929 436 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 GGPS1O95749 300 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 ITGB1P05556 798 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 SMIM10L2AP0DMW4 78 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 SMIM10L2BP0DMW5 78 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 MYCLP12524 364 aaPredicted RBP10.1□□□□□ -0.79
SCRN1-208ENST00000438497 HOXD8P13378 290 aaPredicted RBP10.1□□□□□ -0.79
SCRN1-208ENST00000438497 ATF7P17544 494 aaPredicted RBP10.1□□□□□ -0.79
SCRN1-208ENST00000438497 DNAJB1P25685 340 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 ZNF543Q08ER8 600 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 PTPN21Q16825 1174 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 RRP12Q5JTH9 1297 aaKnown RBP10.1□□□□□ -0.79
SCRN1-208ENST00000438497 CELF3Q5SZQ8 465 aaKnown RBP10.1□□□□□ -0.79
SCRN1-208ENST00000438497 ADSSL1Q8N142 457 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 MICAL1Q8TDZ2 1067 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 NKD2Q969F2 451 aaPredicted RBP10.1□□□□□ -0.79
SCRN1-208ENST00000438497 ZNF689Q96CS4 500 aaPredicted RBP10.1□□□□□ -0.79
SCRN1-208ENST00000438497 TTC14Q96N46 770 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 TLE6Q9H808 572 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 MLXIPQ9HAP2 919 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 ZBTB40Q9NUA8 1239 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 TCP11L1Q9NUJ3 509 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 SETD4Q9NVD3 440 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 BARX2Q9UMQ3 279 aaPredicted RBP10.1□□□□□ -0.79
SCRN1-208ENST00000438497 MYO10Q9HD67 2058 aa10.1□□□□□ -0.79
SCRN1-208ENST00000438497 ABCB11O95342 1321 aa10.09□□□□□ -0.79
SCRN1-208ENST00000438497 ADGRA3Q8IWK6 1321 aa10.09□□□□□ -0.79
SCRN1-208ENST00000438497 PPFIA3O75145 1194 aa10.09□□□□□ -0.79
SCRN1-208ENST00000438497 DGKIO75912 1065 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms