RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ICA1Q05084 483 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 STK4Q13043 487 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 C12orf60Q5U649 245 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 UHMK1Q8TAS1 419 aaKnown RBP7.3□□□□□ -1.24
CSDE1-205ENST00000438362 MAGOHBQ96A72 148 aaKnown RBP7.3□□□□□ -1.24
CSDE1-205ENST00000438362 LRRC1Q9BTT6 524 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 SYNCQ9H7C4 482 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 FAM217BQ9NTX9 383 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-205ENST00000438362 ATP8A1Q9Y2Q0 1164 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 C3P01024 1663 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 ESYT3A0FGR9 886 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 CLIC2O15247 247 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 BUB1BO60566 1050 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-205ENST00000438362 GFPT2O94808 682 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 GBP1P32455 592 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 PSMC2P35998 433 aaKnown RBP7.3□□□□□ -1.24
CSDE1-205ENST00000438362 SBK1Q52WX2 424 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 C6orf163Q5TEZ5 329 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 MAIP1Q8WWC4 291 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 AP1M1Q9BXS5 423 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 ZNF446Q9NWS9 450 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 GCNT4Q9P109 453 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 SRP68Q9UHB9 627 aaKnown RBP7.3□□□□□ -1.24
CSDE1-205ENST00000438362 MON2Q7Z3U7 1717 aa7.3□□□□□ -1.24
CSDE1-205ENST00000438362 PDS5AQ29RF7 1337 aaKnown RBP7.29□□□□□ -1.24
CSDE1-205ENST00000438362 USP17L5A8MUK1 530 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 MEIS1O00470 390 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 HGSO14964 777 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-205ENST00000438362 N4BP1O75113 896 aaKnown RBP7.29□□□□□ -1.24
CSDE1-205ENST00000438362 GAP43P17677 238 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 COASYQ13057 564 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 ZYXQ15942 572 aaKnown RBP7.29□□□□□ -1.24
CSDE1-205ENST00000438362 ODR4Q5SWX8 454 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 LIN9Q5TKA1 542 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 VSIG1Q86XK7 387 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 MGARPQ8TDB4 240 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 RIN2Q8WYP3 895 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-205ENST00000438362 C7orf25Q9BPX7 421 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 TMEM60Q9H2L4 133 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 HOMER2Q9NSB8 354 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 HPCAL4Q9UM19 191 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 PLAAQ9Y263 795 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 CACNA1FO60840 1977 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 TRIM66O15016 1216 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 TRIM37O94972 964 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 ZRANB2O95218 330 aaKnown RBP eCLIP7.29□□□□□ -1.24
CSDE1-205ENST00000438362 FGFR2P21802 821 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 ATP11AP98196 1134 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 GRAPQ13588 217 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 SEC23AQ15436 765 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 WDR93Q6P2C0 686 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 PDXDC1Q6P996 788 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 MMS22LQ6ZRQ5 1243 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 ARMC9Q7Z3E5 817 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 ANKRD42Q8N9B4 389 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 GRAPLQ8TC17 118 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-205ENST00000438362 RUBCNQ92622 972 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 HPS3Q969F9 1004 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 CEP95Q96GE4 821 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 IWS1Q96ST2 819 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 SPZ1Q9BXG8 430 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 PRM3Q9NNZ6 103 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 INTS9Q9NV88 658 aaKnown RBP7.29□□□□□ -1.24
CSDE1-205ENST00000438362 TMEM260Q9NX78 707 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 NOVA2Q9UNW9 492 aaKnown RBP7.29□□□□□ -1.24
CSDE1-205ENST00000438362 LMTK3Q96Q04 1460 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 CTNND1O60716 968 aaKnown RBP7.29□□□□□ -1.24
CSDE1-205ENST00000438362 CLNS1AP54105 237 aaKnown RBP7.29□□□□□ -1.24
CSDE1-205ENST00000438362 PLTPP55058 493 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 KCNH2Q12809 1159 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 ICE2Q659A1 982 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 CCDC197Q8NCU1 140 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 NEDD1Q8NHV4 660 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 RUNDC3BQ96NL0 473 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 FMO2Q99518 471 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 CEP83Q9Y592 693 aa7.29□□□□□ -1.24
CSDE1-205ENST00000438362 SSU72P8A0A1W2PR75 194 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 TCRBV5S4A2TA0A5A2 114 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 K7ENM7 598 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 BACH1O14867 736 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 PRPF6O94906 941 aaKnown RBP7.28□□□□□ -1.24
CSDE1-205ENST00000438362 TDP2O95551 362 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 STX2P32856 288 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 MESDQ14696 234 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 TRAPPC11Q7Z392 1133 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 PPP1R14CQ8TAE6 165 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 CHURC1Q8WUH1 139 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 ANO3Q9BYT9 981 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 PPP1R1BQ9UD71 204 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-205ENST00000438362 JCADQ9P266 1359 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 RIMS1Q86UR5 1692 aaKnown RBP7.28□□□□□ -1.24
CSDE1-205ENST00000438362 GRID2IPA4D2P6 1211 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 E9PMD0 336 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 EIF3BP55884 814 aaKnown RBP7.28□□□□□ -1.24
CSDE1-205ENST00000438362 MYL7Q01449 175 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 SP4Q02446 784 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 SF3B3Q15393 1217 aaKnown RBP7.28□□□□□ -1.24
CSDE1-205ENST00000438362 MIER3Q7Z3K6 550 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 PPM1KQ8N3J5 372 aa7.28□□□□□ -1.24
CSDE1-205ENST00000438362 ERGIC2Q96RQ1 377 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms