RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 SDF4Q9BRK5 362 aa18.63■□□□□ 0.57
CTSD-205ENST00000438213 BCAS3Q9H6U6 928 aa18.63■□□□□ 0.57
CTSD-205ENST00000438213 PRDM5Q9NQX1 630 aaPredicted RBP18.63■□□□□ 0.57
CTSD-205ENST00000438213 TMEM39AQ9NV64 488 aa18.63■□□□□ 0.57
CTSD-205ENST00000438213 MYH7BA7E2Y1 1941 aa18.62■□□□□ 0.57
CTSD-205ENST00000438213 CCDC194A0A1B0GVG4 234 aa18.62■□□□□ 0.57
CTSD-205ENST00000438213 M0R2N6 131 aa18.62■□□□□ 0.57
CTSD-205ENST00000438213 SUPT20HL2P0C7V6 817 aa18.62■□□□□ 0.57
CTSD-205ENST00000438213 ARP10275 920 aa18.62■□□□□ 0.57
CTSD-205ENST00000438213 CIITAP33076 1130 aa18.62■□□□□ 0.57
CTSD-205ENST00000438213 CHMP4BP1P59074 171 aa18.62■□□□□ 0.57
CTSD-205ENST00000438213 SETQ01105 290 aaPredicted RBP18.62■□□□□ 0.57
CTSD-205ENST00000438213 PTPN11Q06124 597 aaPredicted RBP18.62■□□□□ 0.57
CTSD-205ENST00000438213 ST3GAL1Q11201 340 aa18.62■□□□□ 0.57
CTSD-205ENST00000438213 NONOQ15233 471 aaKnown RBP eCLIP18.62■□□□□ 0.57
CTSD-205ENST00000438213 FAM184AQ8NB25 1140 aa18.62■□□□□ 0.57
CTSD-205ENST00000438213 TBCKQ8TEA7 893 aa18.62■□□□□ 0.57
CTSD-205ENST00000438213 LBHD1Q9BQE6 289 aaPredicted RBP18.62■□□□□ 0.57
CTSD-205ENST00000438213 PKD2L1Q9P0L9 805 aa18.62■□□□□ 0.57
CTSD-205ENST00000438213 GRIN2DO15399 1336 aa18.62■□□□□ 0.57
CTSD-205ENST00000438213 ALPK3Q96L96 1907 aa18.61■□□□□ 0.57
CTSD-205ENST00000438213 NFASCO94856 1347 aa18.61■□□□□ 0.57
CTSD-205ENST00000438213 FAM86B1E9PN63 330 aa18.61■□□□□ 0.57
CTSD-205ENST00000438213 FAM86B2P0C5J1 330 aa18.61■□□□□ 0.57
CTSD-205ENST00000438213 FAAP100Q0VG06 881 aa18.61■□□□□ 0.57
CTSD-205ENST00000438213 NPY5RQ15761 445 aa18.61■□□□□ 0.57
CTSD-205ENST00000438213 FAM47CQ5HY64 1035 aa18.61■□□□□ 0.57
CTSD-205ENST00000438213 FAM126BQ8IXS8 530 aa18.61■□□□□ 0.57
CTSD-205ENST00000438213 SEPT1Q8WYJ6 367 aa18.61■□□□□ 0.57
CTSD-205ENST00000438213 GPR20Q99678 358 aa18.61■□□□□ 0.57
CTSD-205ENST00000438213 AGO4Q9HCK5 861 aaKnown RBP18.61■□□□□ 0.57
CTSD-205ENST00000438213 PDLIM7Q9NR12 457 aa18.61■□□□□ 0.57
CTSD-205ENST00000438213 GJB4Q9NTQ9 266 aa18.61■□□□□ 0.57
CTSD-205ENST00000438213 KIAA0355O15063 1070 aa18.6■□□□□ 0.57
CTSD-205ENST00000438213 KRT2P35908 639 aa18.6■□□□□ 0.57
CTSD-205ENST00000438213 PSEN2P49810 448 aa18.6■□□□□ 0.57
CTSD-205ENST00000438213 SP4Q02446 784 aa18.6■□□□□ 0.57
CTSD-205ENST00000438213 SAFBQ15424 915 aaKnown RBP eCLIP18.6■□□□□ 0.57
CTSD-205ENST00000438213 PRR16Q569H4 304 aa18.6■□□□□ 0.57
CTSD-205ENST00000438213 KAT2BQ92831 832 aa18.6■□□□□ 0.57
CTSD-205ENST00000438213 TMX3Q96JJ7 454 aa18.6■□□□□ 0.57
CTSD-205ENST00000438213 JPH1Q9HDC5 661 aaPredicted RBP18.6■□□□□ 0.57
CTSD-205ENST00000438213 TBC1D22BQ9NU19 505 aa18.6■□□□□ 0.57
CTSD-205ENST00000438213 SLC9A2Q9UBY0 812 aa18.6■□□□□ 0.57
CTSD-205ENST00000438213 KIF3AQ9Y496 699 aa18.6■□□□□ 0.57
CTSD-205ENST00000438213 IGLV3-22A0A075B6J6 115 aa18.59■□□□□ 0.57
CTSD-205ENST00000438213 H3BRB1 525 aa18.59■□□□□ 0.57
CTSD-205ENST00000438213 F2P00734 622 aa18.59■□□□□ 0.57
CTSD-205ENST00000438213 CD4P01730 458 aa18.59■□□□□ 0.57
CTSD-205ENST00000438213 ZNF286BP0CG31 522 aa18.59■□□□□ 0.57
CTSD-205ENST00000438213 RAG1P15918 1043 aa18.59■□□□□ 0.57
CTSD-205ENST00000438213 MFSD10Q14728 455 aa18.59■□□□□ 0.57
CTSD-205ENST00000438213 KIAA0753Q2KHM9 967 aa18.59■□□□□ 0.57
CTSD-205ENST00000438213 KRT40Q6A162 431 aa18.59■□□□□ 0.57
CTSD-205ENST00000438213 SH3RF1Q7Z6J0 888 aa18.59■□□□□ 0.57
CTSD-205ENST00000438213 C7orf31Q8N865 590 aa18.59■□□□□ 0.57
CTSD-205ENST00000438213 C8orf76Q96K31 380 aa18.59■□□□□ 0.57
CTSD-205ENST00000438213 ZNF577Q9BSK1 485 aa18.59■□□□□ 0.57
CTSD-205ENST00000438213 C16orf70Q9BSU1 422 aa18.59■□□□□ 0.57
CTSD-205ENST00000438213 TUT1Q9H6E5 874 aaKnown RBP18.59■□□□□ 0.57
CTSD-205ENST00000438213 TRIM43BA6NCK2 446 aa18.58■□□□□ 0.56
CTSD-205ENST00000438213 HAS3O00219 553 aa18.58■□□□□ 0.56
CTSD-205ENST00000438213 IPO5O00410 1097 aaKnown RBP18.58■□□□□ 0.56
CTSD-205ENST00000438213 MMP1P03956 469 aa18.58■□□□□ 0.56
CTSD-205ENST00000438213 LGALS2P05162 132 aa18.58■□□□□ 0.56
CTSD-205ENST00000438213 INF2Q27J81 1249 aa18.58■□□□□ 0.56
CTSD-205ENST00000438213 UTP14CQ5TAP6 766 aaKnown RBP18.58■□□□□ 0.56
CTSD-205ENST00000438213 MOXD1Q6UVY6 613 aa18.58■□□□□ 0.56
CTSD-205ENST00000438213 SESTD1Q86VW0 696 aa18.58■□□□□ 0.56
CTSD-205ENST00000438213 OXER1Q8TDS5 423 aa18.58■□□□□ 0.56
CTSD-205ENST00000438213 TRIM43Q96BQ3 446 aaPredicted RBP18.58■□□□□ 0.56
CTSD-205ENST00000438213 NAP1L4Q99733 375 aaKnown RBP18.58■□□□□ 0.56
CTSD-205ENST00000438213 TRPV6Q9H1D0 765 aa18.58■□□□□ 0.56
CTSD-205ENST00000438213 TCEAL9Q9UHQ7 104 aa18.58■□□□□ 0.56
CTSD-205ENST00000438213 ZNF215Q9UL58 517 aaPredicted RBP18.58■□□□□ 0.56
CTSD-205ENST00000438213 DNAH12Q6ZR08 3092 aa18.58■□□□□ 0.56
CTSD-205ENST00000438213 CYP3A7-CYP3A51PA0A087WV96 503 aa18.57■□□□□ 0.56
CTSD-205ENST00000438213 GSTTP1A0A1W2PQM5 241 aa18.57■□□□□ 0.56
CTSD-205ENST00000438213 B4GALT4O60513 344 aa18.57■□□□□ 0.56
CTSD-205ENST00000438213 CD2BP2O95400 341 aaKnown RBP18.57■□□□□ 0.56
CTSD-205ENST00000438213 TIMP1P01033 207 aa18.57■□□□□ 0.56
CTSD-205ENST00000438213 CYP3A7P24462 503 aa18.57■□□□□ 0.56
CTSD-205ENST00000438213 TCF7P36402 384 aaPredicted RBP18.57■□□□□ 0.56
CTSD-205ENST00000438213 MAGEA10P43363 369 aaPredicted RBP18.57■□□□□ 0.56
CTSD-205ENST00000438213 FOSBP53539 338 aa18.57■□□□□ 0.56
CTSD-205ENST00000438213 ITGB3BPQ13352 177 aaPredicted RBP18.57■□□□□ 0.56
CTSD-205ENST00000438213 CHRDL2Q6WN34 429 aa18.57■□□□□ 0.56
CTSD-205ENST00000438213 PIK3AP1Q6ZUJ8 805 aa18.57■□□□□ 0.56
CTSD-205ENST00000438213 GDF15Q99988 308 aa18.57■□□□□ 0.56
CTSD-205ENST00000438213 TBX21Q9UL17 535 aa18.57■□□□□ 0.56
CTSD-205ENST00000438213 NOD1Q9Y239 953 aa18.57■□□□□ 0.56
CTSD-205ENST00000438213 SCN10AQ9Y5Y9 1956 aa18.57■□□□□ 0.56
CTSD-205ENST00000438213 GCFC2P16383 781 aaKnown RBP18.56■□□□□ 0.56
CTSD-205ENST00000438213 BMP8BP34820 402 aa18.56■□□□□ 0.56
CTSD-205ENST00000438213 MDM2Q00987 491 aaPredicted RBP18.56■□□□□ 0.56
CTSD-205ENST00000438213 Q4G0T1 1027 aa18.56■□□□□ 0.56
CTSD-205ENST00000438213 NEK8Q86SG6 692 aa18.56■□□□□ 0.56
CTSD-205ENST00000438213 DIS3L2Q8IYB7 885 aaKnown RBP18.56■□□□□ 0.56
CTSD-205ENST00000438213 GLG1Q92896 1179 aa18.56■□□□□ 0.56
CTSD-205ENST00000438213 SMARCAD1Q9H4L7 1026 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms