RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 GPR20Q99678 358 aa16.64■□□□□ 0.25
TNFRSF1A-203ENST00000437813 MTCH2Q9Y6C9 303 aa16.64■□□□□ 0.25
TNFRSF1A-203ENST00000437813 LCHNA4D1U4 455 aa16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 H3BRB1 525 aa16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 RFXAPO00287 272 aa16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 FIBPO43427 364 aa16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 BMP2KLQ5H9B9 411 aa16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 XRRA1Q6P2D8 792 aa16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 TMCO2Q7Z6W1 182 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 TMTC2Q8N394 836 aa16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 CTCFLQ8NI51 663 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 PIBF1Q8WXW3 757 aa16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 RRP36Q96EU6 259 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 ASB2Q96Q27 587 aa16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 SENP7Q9BQF6 1050 aa16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 LZTS2Q9BRK4 669 aa16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 OSBPL7Q9BZF2 842 aa16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 TUT1Q9H6E5 874 aaKnown RBP16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 THEGQ9P2T0 379 aa16.63■□□□□ 0.25
TNFRSF1A-203ENST00000437813 SIP14410 1827 aa16.62■□□□□ 0.25
TNFRSF1A-203ENST00000437813 ABHD14A-ACY1A0A1B0GW23 586 aa16.62■□□□□ 0.25
TNFRSF1A-203ENST00000437813 SMIM10L2AP0DMW4 78 aa16.62■□□□□ 0.25
TNFRSF1A-203ENST00000437813 SMIM10L2BP0DMW5 78 aa16.62■□□□□ 0.25
TNFRSF1A-203ENST00000437813 RXRAP19793 462 aa16.62■□□□□ 0.25
TNFRSF1A-203ENST00000437813 IGFBP4P22692 258 aa16.62■□□□□ 0.25
TNFRSF1A-203ENST00000437813 FUT2Q10981 343 aa16.62■□□□□ 0.25
TNFRSF1A-203ENST00000437813 CCDC85BQ15834 202 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF1A-203ENST00000437813 GNPTABQ3T906 1256 aa16.62■□□□□ 0.25
TNFRSF1A-203ENST00000437813 CMTR1Q8N1G2 835 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-203ENST00000437813 PPM1EQ8WY54 764 aa16.62■□□□□ 0.25
TNFRSF1A-203ENST00000437813 SYMPKQ92797 1274 aaKnown RBP16.62■□□□□ 0.25
TNFRSF1A-203ENST00000437813 RNPEPQ9H4A4 650 aa16.62■□□□□ 0.25
TNFRSF1A-203ENST00000437813 MLXIPQ9HAP2 919 aa16.62■□□□□ 0.25
TNFRSF1A-203ENST00000437813 GJB5O95377 273 aa16.61■□□□□ 0.25
TNFRSF1A-203ENST00000437813 GNAQP50148 359 aa16.61■□□□□ 0.25
TNFRSF1A-203ENST00000437813 NEDD9Q14511 834 aa16.61■□□□□ 0.25
TNFRSF1A-203ENST00000437813 CASC1Q6TDU7 716 aa16.61■□□□□ 0.25
TNFRSF1A-203ENST00000437813 TMTC3Q6ZXV5 915 aa16.61■□□□□ 0.25
TNFRSF1A-203ENST00000437813 CYFIP1Q7L576 1253 aa16.61■□□□□ 0.25
TNFRSF1A-203ENST00000437813 TRIM50Q86XT4 487 aa16.61■□□□□ 0.25
TNFRSF1A-203ENST00000437813 USP26Q9BXU7 913 aa16.61■□□□□ 0.25
TNFRSF1A-203ENST00000437813 RTEL1Q9NZ71 1219 aa16.61■□□□□ 0.25
TNFRSF1A-203ENST00000437813 TREHO43280 583 aa16.6■□□□□ 0.25
TNFRSF1A-203ENST00000437813 ATP9AO75110 1047 aa16.6■□□□□ 0.25
TNFRSF1A-203ENST00000437813 LGR5O75473 907 aa16.6■□□□□ 0.25
TNFRSF1A-203ENST00000437813 KCNA2P16389 499 aa16.6■□□□□ 0.25
TNFRSF1A-203ENST00000437813 ITGB5P18084 799 aa16.6■□□□□ 0.25
TNFRSF1A-203ENST00000437813 EXOSC10Q01780 885 aaKnown RBP16.6■□□□□ 0.25
TNFRSF1A-203ENST00000437813 TSGA10IPQ3SY00 556 aa16.6■□□□□ 0.25
TNFRSF1A-203ENST00000437813 PLEKHG4Q58EX7 1191 aa16.6■□□□□ 0.25
TNFRSF1A-203ENST00000437813 KRT40Q6A162 431 aa16.6■□□□□ 0.25
TNFRSF1A-203ENST00000437813 FANCBQ8NB91 859 aa16.6■□□□□ 0.25
TNFRSF1A-203ENST00000437813 LRRC2Q9BYS8 371 aa16.6■□□□□ 0.25
TNFRSF1A-203ENST00000437813 CERS4Q9HA82 394 aa16.6■□□□□ 0.25
TNFRSF1A-203ENST00000437813 UBIAD1Q9Y5Z9 338 aa16.6■□□□□ 0.25
TNFRSF1A-203ENST00000437813 COL4A6Q14031 1691 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 hCG_1642624A0A1W2PR95 340 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 C17orf102A2RUQ5 167 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 TLL1O43897 1013 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 EFCAB14O75071 495 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 CALM1P0DP23 149 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 CALM2P0DP24 149 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 CALM3P0DP25 149 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 KCNJ6P48051 423 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 TYW1BQ6NUM6 668 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 APOA5Q6Q788 366 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 RAB11FIP4Q86YS3 637 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 RASEFQ8IZ41 740 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 DBF4BQ8NFT6 615 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 SMARCC2Q8TAQ2 1214 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 ATP6V0A1Q93050 837 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 GPRASP2Q96D09 838 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 PSTPIP2Q9H939 334 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 ANO2Q9NQ90 1003 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 SEC63Q9UGP8 760 aaKnown RBP16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 EMSYQ7Z589 1322 aa16.59■□□□□ 0.25
TNFRSF1A-203ENST00000437813 CCDC69A6NI79 296 aa16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 RSPH10B2B2RC85 870 aa16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 KIF28PB7ZC32 967 aa16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 CAND2O75155 1236 aa16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 RSPH10BP0C881 870 aa16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 BMP1P13497 986 aa16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 MRPS5P82675 430 aaKnown RBP16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 GRB10Q13322 594 aa16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 IKBKEQ14164 716 aa16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 FAM26DQ5JW98 314 aa16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 LMBR1Q8WVP7 490 aa16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 ARNTL2Q8WYA1 636 aa16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 RAD9AQ99638 391 aa16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 FAM217BQ9NTX9 383 aaPredicted RBP16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 SETD4Q9NVD3 440 aa16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 SLC12A7Q9Y666 1083 aa16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 CNTNAP5Q8WYK1 1306 aa16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 KAT6AQ92794 2004 aa16.58■□□□□ 0.24
TNFRSF1A-203ENST00000437813 GSTTP1A0A1W2PQM5 241 aa16.57■□□□□ 0.24
TNFRSF1A-203ENST00000437813 LINC01553A4QN01 128 aa16.57■□□□□ 0.24
TNFRSF1A-203ENST00000437813 NOP56O00567 594 aaKnown RBP16.57■□□□□ 0.24
TNFRSF1A-203ENST00000437813 THPOP40225 353 aa16.57■□□□□ 0.24
TNFRSF1A-203ENST00000437813 ERVK-21P61565 698 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms