RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 PHOSPHO1Q8TCT1 267 aa5.48□□□□□ -1.53
HMGB1P31-201ENST00000437242 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.48□□□□□ -1.53
HMGB1P31-201ENST00000437242 CD248Q9HCU0 757 aa5.48□□□□□ -1.53
HMGB1P31-201ENST00000437242 KRIT1O00522 736 aa5.47□□□□□ -1.53
HMGB1P31-201ENST00000437242 CYR61O00622 381 aa5.47□□□□□ -1.53
HMGB1P31-201ENST00000437242 FZD7O75084 574 aa5.47□□□□□ -1.53
HMGB1P31-201ENST00000437242 SLFN13Q68D06 897 aa5.47□□□□□ -1.53
HMGB1P31-201ENST00000437242 Q8N1X5 172 aa5.47□□□□□ -1.53
HMGB1P31-201ENST00000437242 TMEM145Q8NBT3 493 aa5.47□□□□□ -1.53
HMGB1P31-201ENST00000437242 DNERQ8NFT8 737 aa5.47□□□□□ -1.53
HMGB1P31-201ENST00000437242 SMOC1Q9H4F8 434 aa5.47□□□□□ -1.53
HMGB1P31-201ENST00000437242 ZDHHC9Q9Y397 364 aa5.47□□□□□ -1.53
HMGB1P31-201ENST00000437242 MUSKO15146 869 aa5.46□□□□□ -1.54
HMGB1P31-201ENST00000437242 B4GALT4O60513 344 aa5.46□□□□□ -1.54
HMGB1P31-201ENST00000437242 DDAH1O94760 285 aa5.46□□□□□ -1.54
HMGB1P31-201ENST00000437242 SSBP05455 408 aaKnown RBP eCLIP5.46□□□□□ -1.54
HMGB1P31-201ENST00000437242 ATF4P18848 351 aaPredicted RBP5.46□□□□□ -1.54
HMGB1P31-201ENST00000437242 VASNQ6EMK4 673 aa5.46□□□□□ -1.54
HMGB1P31-201ENST00000437242 CYP4F22Q6NT55 531 aa5.46□□□□□ -1.54
HMGB1P31-201ENST00000437242 ZFPM1Q8IX07 1006 aa5.46□□□□□ -1.54
HMGB1P31-201ENST00000437242 MRRFQ96E11 262 aaKnown RBP5.46□□□□□ -1.54
HMGB1P31-201ENST00000437242 ZNF747Q9BV97 191 aa5.46□□□□□ -1.54
HMGB1P31-201ENST00000437242 MRIQ9BWK5 157 aa5.46□□□□□ -1.54
HMGB1P31-201ENST00000437242 CAPN10Q9HC96 672 aa5.46□□□□□ -1.54
HMGB1P31-201ENST00000437242 MRVI1Q9Y6F6 885 aa5.46□□□□□ -1.54
HMGB1P31-201ENST00000437242 SLPIP03973 132 aa5.45□□□□□ -1.54
HMGB1P31-201ENST00000437242 DENND5AQ6IQ26 1287 aa5.45□□□□□ -1.54
HMGB1P31-201ENST00000437242 RALYLQ86SE5 291 aaKnown RBP5.45□□□□□ -1.54
HMGB1P31-201ENST00000437242 TRIM48Q8IWZ4 208 aa5.45□□□□□ -1.54
HMGB1P31-201ENST00000437242 PTPN18Q99952 460 aa5.45□□□□□ -1.54
HMGB1P31-201ENST00000437242 MEGF9Q9H1U4 602 aa5.45□□□□□ -1.54
HMGB1P31-201ENST00000437242 SEMA4AQ9H3S1 761 aa5.45□□□□□ -1.54
HMGB1P31-201ENST00000437242 DLL4Q9NR61 685 aa5.45□□□□□ -1.54
HMGB1P31-201ENST00000437242 RBPJLQ9UBG7 517 aa5.45□□□□□ -1.54
HMGB1P31-201ENST00000437242 ASH2LQ9UBL3 628 aa5.45□□□□□ -1.54
HMGB1P31-201ENST00000437242 WASF3Q9UPY6 502 aa5.45□□□□□ -1.54
HMGB1P31-201ENST00000437242 PATE3B3GLJ2 98 aa5.44□□□□□ -1.54
HMGB1P31-201ENST00000437242 AGRPO00253 132 aa5.44□□□□□ -1.54
HMGB1P31-201ENST00000437242 ZNF623O75123 536 aa5.44□□□□□ -1.54
HMGB1P31-201ENST00000437242 ACVRL1P37023 503 aa5.44□□□□□ -1.54
HMGB1P31-201ENST00000437242 FXNQ16595 210 aa5.44□□□□□ -1.54
HMGB1P31-201ENST00000437242 SLC35F1Q5T1Q4 408 aa5.44□□□□□ -1.54
HMGB1P31-201ENST00000437242 NUDT10Q8NFP7 164 aa5.44□□□□□ -1.54
HMGB1P31-201ENST00000437242 TTLL11Q8NHH1 800 aa5.44□□□□□ -1.54
HMGB1P31-201ENST00000437242 NUDT11Q96G61 164 aa5.44□□□□□ -1.54
HMGB1P31-201ENST00000437242 C1orf159Q96HA4 380 aa5.44□□□□□ -1.54
HMGB1P31-201ENST00000437242 HSPBP1Q9NZL4 362 aa5.44□□□□□ -1.54
HMGB1P31-201ENST00000437242 ADAM29Q9UKF5 820 aa5.44□□□□□ -1.54
HMGB1P31-201ENST00000437242 FBXO21O94952 628 aa5.43□□□□□ -1.54
HMGB1P31-201ENST00000437242 AMHP03971 560 aa5.43□□□□□ -1.54
HMGB1P31-201ENST00000437242 COL6A1P12109 1028 aa5.43□□□□□ -1.54
HMGB1P31-201ENST00000437242 GRIN1Q05586 938 aa5.43□□□□□ -1.54
HMGB1P31-201ENST00000437242 R3HDM1Q15032 1099 aaKnown RBP5.43□□□□□ -1.54
HMGB1P31-201ENST00000437242 SPDYAQ5MJ70 313 aa5.43□□□□□ -1.54
HMGB1P31-201ENST00000437242 PHF19Q5T6S3 580 aa5.43□□□□□ -1.54
HMGB1P31-201ENST00000437242 MRM1Q6IN84 353 aaKnown RBP5.43□□□□□ -1.54
HMGB1P31-201ENST00000437242 EEPD1Q7L9B9 569 aa5.43□□□□□ -1.54
HMGB1P31-201ENST00000437242 DTX3Q8N9I9 347 aa5.43□□□□□ -1.54
HMGB1P31-201ENST00000437242 PIP4K2CQ8TBX8 421 aa5.43□□□□□ -1.54
HMGB1P31-201ENST00000437242 KCTD13Q8WZ19 329 aa5.43□□□□□ -1.54
HMGB1P31-201ENST00000437242 SLC6A20Q9NP91 592 aa5.43□□□□□ -1.54
HMGB1P31-201ENST00000437242 PRKAG3Q9UGI9 489 aa5.43□□□□□ -1.54
HMGB1P31-201ENST00000437242 NPFFR2Q9Y5X5 522 aa5.43□□□□□ -1.54
HMGB1P31-201ENST00000437242 SLC27A2O14975 620 aa5.42□□□□□ -1.54
HMGB1P31-201ENST00000437242 MAP4K2Q12851 820 aa5.42□□□□□ -1.54
HMGB1P31-201ENST00000437242 SMAD2Q15796 467 aaKnown RBP5.42□□□□□ -1.54
HMGB1P31-201ENST00000437242 HS1BP3Q53T59 392 aa5.42□□□□□ -1.54
HMGB1P31-201ENST00000437242 Q6ZUG5 572 aa5.42□□□□□ -1.54
HMGB1P31-201ENST00000437242 PROSER1Q86XN7 944 aa5.42□□□□□ -1.54
HMGB1P31-201ENST00000437242 VPS37DQ86XT2 251 aa5.42□□□□□ -1.54
HMGB1P31-201ENST00000437242 IFNL2Q8IZJ0 200 aa5.42□□□□□ -1.54
HMGB1P31-201ENST00000437242 WWC2-AS2Q96NR7 200 aa5.42□□□□□ -1.54
HMGB1P31-201ENST00000437242 JAM3Q9BX67 310 aa5.42□□□□□ -1.54
HMGB1P31-201ENST00000437242 EPN3Q9H201 632 aa5.42□□□□□ -1.54
HMGB1P31-201ENST00000437242 SEC61A2Q9H9S3 476 aa5.42□□□□□ -1.54
HMGB1P31-201ENST00000437242 GPR27Q9NS67 375 aa5.42□□□□□ -1.54
HMGB1P31-201ENST00000437242 OVOL3O00110 214 aa5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 KLHL18O94889 574 aa5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 CNOT4O95628 575 aaKnown RBP5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 CHGBP05060 677 aa5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 PPP2R2AP63151 447 aa5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 SLC10A6Q3KNW5 377 aa5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 USP53Q70EK8 1073 aa5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 MICAL1Q8TDZ2 1067 aa5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 IER2Q9BTL4 223 aa5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 MENTQ9BUN1 341 aa5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 PHF20Q9BVI0 1012 aa5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 CDIP1Q9H305 208 aa5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 PPARGC1AQ9UBK2 798 aaKnown RBP5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 ZFP69BQ9UJL9 534 aa5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 TESMINQ9Y4I5 508 aa5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 NUB1Q9Y5A7 615 aa5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 HS3ST3A1Q9Y663 406 aa5.41□□□□□ -1.54
HMGB1P31-201ENST00000437242 GRIA2P42262 883 aa5.4□□□□□ -1.54
HMGB1P31-201ENST00000437242 GLRBP48167 497 aa5.4□□□□□ -1.54
HMGB1P31-201ENST00000437242 TUSC3Q13454 348 aa5.4□□□□□ -1.54
HMGB1P31-201ENST00000437242 SKIDA1Q1XH10 827 aa5.4□□□□□ -1.54
HMGB1P31-201ENST00000437242 ZNF568Q3ZCX4 644 aa5.4□□□□□ -1.54
HMGB1P31-201ENST00000437242 GPR155Q7Z3F1 870 aa5.4□□□□□ -1.54
HMGB1P31-201ENST00000437242 Q8TCH9 128 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms