RNA–Protein interactions for RNA: ENST00000436539.1

AP006285.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP006285.1, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP006285.1-201ENST00000436539 HOXD8P13378 290 aaPredicted RBP12.16□□□□□ -0.46
AP006285.1-201ENST00000436539 GCFC2P16383 781 aaKnown RBP12.16□□□□□ -0.46
AP006285.1-201ENST00000436539 HSDL1Q3SXM5 330 aa12.16□□□□□ -0.46
AP006285.1-201ENST00000436539 CXCL17Q6UXB2 119 aa12.16□□□□□ -0.46
AP006285.1-201ENST00000436539 GIMAP8Q8ND71 665 aaPredicted RBP12.16□□□□□ -0.46
AP006285.1-201ENST00000436539 MBOAT7Q96N66 472 aa12.16□□□□□ -0.46
AP006285.1-201ENST00000436539 SENP6Q9GZR1 1112 aaPredicted RBP12.16□□□□□ -0.46
AP006285.1-201ENST00000436539 FOXP1Q9H334 677 aaPredicted RBP12.16□□□□□ -0.46
AP006285.1-201ENST00000436539 MLXIPQ9HAP2 919 aa12.16□□□□□ -0.46
AP006285.1-201ENST00000436539 AGO4Q9HCK5 861 aaKnown RBP12.16□□□□□ -0.46
AP006285.1-201ENST00000436539 MKI67P46013 3256 aaKnown RBP12.16□□□□□ -0.46
AP006285.1-201ENST00000436539 SCN10AQ9Y5Y9 1956 aa12.16□□□□□ -0.46
AP006285.1-201ENST00000436539 ALPK3Q96L96 1907 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 NFASCO94856 1347 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 CYP3A7-CYP3A51PA0A087WV96 503 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 KIF28PB7ZC32 967 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 H3BQV1 296 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 NOP56O00567 594 aaKnown RBP12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 CABYRO75952 493 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 CYP3A7P24462 503 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 PURAQ00577 322 aaKnown RBP12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 ITGB3BPQ13352 177 aaPredicted RBP12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 GNL2Q13823 731 aaKnown RBP12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 LETM2Q2VYF4 491 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 Q4G0T1 1027 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 CYFIP1Q7L576 1253 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 NOSTRINQ8IVI9 506 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 FERMT2Q96AC1 680 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 GLT1D1Q96MS3 346 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 NAP1L4Q99733 375 aaKnown RBP12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 SDF4Q9BRK5 362 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 BCAS3Q9H6U6 928 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 JPH1Q9HDC5 661 aaPredicted RBP12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 STARD7Q9NQZ5 370 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 FOXD4L1Q9NU39 408 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 POLR3EQ9NVU0 708 aa12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 DDX25Q9UHL0 483 aaKnown RBP12.15□□□□□ -0.46
AP006285.1-201ENST00000436539 IPO5O00410 1097 aaKnown RBP12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 SLC37A4O43826 429 aa12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 KPNA6O60684 536 aa12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 HSP90AA1P07900 732 aaKnown RBP12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 MYL3P08590 195 aa12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 ZNF286BP0CG31 522 aa12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 PDCP20941 246 aa12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 U2AF2P26368 475 aaKnown RBP eCLIP12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 SP4Q02446 784 aa12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 SNX17Q15036 470 aa12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 DGKDQ16760 1214 aa12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 LARP1BQ659C4 914 aaKnown RBP12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 PPP4R3AQ6IN85 833 aa12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 GPR20Q99678 358 aa12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 ZNF577Q9BSK1 485 aa12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 MTG1Q9BT17 334 aaPredicted RBP12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 HTATIP2Q9BUP3 242 aa12.14□□□□□ -0.47
AP006285.1-201ENST00000436539 ELP1O95163 1332 aa12.13□□□□□ -0.47
AP006285.1-201ENST00000436539 WNT7AO00755 349 aa12.13□□□□□ -0.47
AP006285.1-201ENST00000436539 MSH4O15457 936 aa12.13□□□□□ -0.47
AP006285.1-201ENST00000436539 CCNT1O60563 726 aaKnown RBP12.13□□□□□ -0.47
AP006285.1-201ENST00000436539 F2P00734 622 aa12.13□□□□□ -0.47
AP006285.1-201ENST00000436539 ATN1P54259 1190 aaPredicted RBP12.13□□□□□ -0.47
AP006285.1-201ENST00000436539 MCTP1Q6DN14 999 aa12.13□□□□□ -0.47
AP006285.1-201ENST00000436539 SLC5A5Q92911 643 aa12.13□□□□□ -0.47
AP006285.1-201ENST00000436539 SLC9A2Q9UBY0 812 aa12.13□□□□□ -0.47
AP006285.1-201ENST00000436539 TELO2Q9Y4R8 837 aa12.13□□□□□ -0.47
AP006285.1-201ENST00000436539 CEP290O15078 2479 aa12.12□□□□□ -0.47
AP006285.1-201ENST00000436539 A0A0U1RQG5 324 aaPredicted RBP12.12□□□□□ -0.47
AP006285.1-201ENST00000436539 VPS37CA5D8V6 355 aaPredicted RBP12.12□□□□□ -0.47
AP006285.1-201ENST00000436539 DDX39AO00148 427 aaKnown RBP12.12□□□□□ -0.47
AP006285.1-201ENST00000436539 DHX15O43143 795 aaKnown RBP12.12□□□□□ -0.47
AP006285.1-201ENST00000436539 PPFIA4O75335 1185 aa12.12□□□□□ -0.47
AP006285.1-201ENST00000436539 LGALS2P05162 132 aa12.12□□□□□ -0.47
AP006285.1-201ENST00000436539 TRAPPC10P48553 1259 aa12.12□□□□□ -0.47
AP006285.1-201ENST00000436539 LRRC26Q2I0M4 334 aa12.12□□□□□ -0.47
AP006285.1-201ENST00000436539 ETNPPLQ8TBG4 499 aa12.12□□□□□ -0.47
AP006285.1-201ENST00000436539 UIMC1Q96RL1 719 aa12.12□□□□□ -0.47
AP006285.1-201ENST00000436539 RIT2Q99578 217 aa12.12□□□□□ -0.47
AP006285.1-201ENST00000436539 KCNMB3Q9NPA1 279 aa12.12□□□□□ -0.47
AP006285.1-201ENST00000436539 TBC1D22BQ9NU19 505 aa12.12□□□□□ -0.47
AP006285.1-201ENST00000436539 TCEAL9Q9UHQ7 104 aa12.12□□□□□ -0.47
AP006285.1-201ENST00000436539 NOL7Q9UMY1 257 aaKnown RBP12.12□□□□□ -0.47
AP006285.1-201ENST00000436539 EMSYQ7Z589 1322 aa12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 TBX3O15119 743 aa12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 NEMFO60524 1076 aa12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 GAS7O60861 476 aa12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 CCNE2O96020 404 aa12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 SYT1P21579 422 aa12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 TCF7P36402 384 aaPredicted RBP12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 RTP1P59025 263 aa12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 ACTR2P61160 394 aa12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 PSMC6P62333 389 aa12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 KRT76Q01546 638 aa12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 MLLT1Q03111 559 aaPredicted RBP12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 ORC2Q13416 577 aaPredicted RBP12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 BECN1Q14457 450 aa12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 TRIM60Q495X7 471 aa12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 C1orf53Q5VUE5 145 aa12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 LRCH2Q5VUJ6 765 aa12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 SLC39A5Q6ZMH5 540 aa12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 TRIM50Q86XT4 487 aa12.11□□□□□ -0.47
AP006285.1-201ENST00000436539 KAT2BQ92831 832 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms