RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 AKAP17AQ02040 695 aaKnown RBP12.52□□□□□ -0.41
HMGCL-204ENST00000436439 LY6KQ17RY6 165 aa12.52□□□□□ -0.41
HMGCL-204ENST00000436439 FAM47CQ5HY64 1035 aa12.52□□□□□ -0.41
HMGCL-204ENST00000436439 CCDC62Q6P9F0 684 aa12.52□□□□□ -0.41
HMGCL-204ENST00000436439 CMTR1Q8N1G2 835 aaKnown RBP12.52□□□□□ -0.41
HMGCL-204ENST00000436439 SYTL5Q8TDW5 730 aaPredicted RBP12.52□□□□□ -0.41
HMGCL-204ENST00000436439 ALG1Q9BT22 464 aa12.52□□□□□ -0.41
HMGCL-204ENST00000436439 ZSCAN16Q9H4T2 348 aaPredicted RBP12.52□□□□□ -0.41
HMGCL-204ENST00000436439 VAT1LQ9HCJ6 419 aa12.52□□□□□ -0.41
HMGCL-204ENST00000436439 ATP6V1DQ9Y5K8 247 aa12.52□□□□□ -0.41
HMGCL-204ENST00000436439 REV3LO60673 3130 aa12.51□□□□□ -0.41
HMGCL-204ENST00000436439 CHD7Q9P2D1 2997 aa12.51□□□□□ -0.41
HMGCL-204ENST00000436439 VPS37CA5D8V6 355 aaPredicted RBP12.51□□□□□ -0.41
HMGCL-204ENST00000436439 OPLAHO14841 1288 aa12.51□□□□□ -0.41
HMGCL-204ENST00000436439 MYOGP15173 224 aa12.51□□□□□ -0.41
HMGCL-204ENST00000436439 XBP1P17861 261 aa12.51□□□□□ -0.41
HMGCL-204ENST00000436439 ADGRE1Q14246 886 aa12.51□□□□□ -0.41
HMGCL-204ENST00000436439 TTLL4Q14679 1199 aa12.51□□□□□ -0.41
HMGCL-204ENST00000436439 PFKFB3Q16875 520 aaPredicted RBP12.51□□□□□ -0.41
HMGCL-204ENST00000436439 SLC35G1Q2M3R5 365 aa12.51□□□□□ -0.41
HMGCL-204ENST00000436439 DEFB128Q7Z7B8 93 aa12.51□□□□□ -0.41
HMGCL-204ENST00000436439 CCDC82Q8N4S0 544 aa12.51□□□□□ -0.41
HMGCL-204ENST00000436439 MPHOSPH6Q99547 160 aaKnown RBP12.51□□□□□ -0.41
HMGCL-204ENST00000436439 SH3GLB2Q9NR46 395 aa12.51□□□□□ -0.41
HMGCL-204ENST00000436439 V9GY48 417 aaPredicted RBP12.51□□□□□ -0.41
HMGCL-204ENST00000436439 DOCK5Q9H7D0 1870 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 hCG_1984214I3L0E3 225 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 PPP1R11O60927 126 aaPredicted RBP12.5□□□□□ -0.41
HMGCL-204ENST00000436439 PPFIA3O75145 1194 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 BAG4O95429 457 aaKnown RBP12.5□□□□□ -0.41
HMGCL-204ENST00000436439 MMP3P08254 477 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 SUPT20HL2P0C7V6 817 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 SCG2P13521 617 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 ARHGAP1Q07960 439 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 TRIM29Q14134 588 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 RAB30Q15771 203 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 NFRKBQ6P4R8 1299 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 SEPT14Q6ZU15 432 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 FBXO11Q86XK2 927 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 RPUSD2Q8IZ73 545 aaKnown RBP12.5□□□□□ -0.41
HMGCL-204ENST00000436439 ZNF713Q8N859 430 aaPredicted RBP12.5□□□□□ -0.41
HMGCL-204ENST00000436439 AFG1LQ8WV93 481 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 PPM1EQ8WY54 764 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 MTMR8Q96EF0 704 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 AIFM3Q96NN9 605 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 CTAGE1Q96RT6 745 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 GAS2L1Q99501 681 aaPredicted RBP12.5□□□□□ -0.41
HMGCL-204ENST00000436439 MTIF3Q9H2K0 278 aaKnown RBP12.5□□□□□ -0.41
HMGCL-204ENST00000436439 MSRAQ9UJ68 235 aa12.5□□□□□ -0.41
HMGCL-204ENST00000436439 ZBBXA8MT70 800 aa12.49□□□□□ -0.41
HMGCL-204ENST00000436439 B4DLN1 442 aa12.49□□□□□ -0.41
HMGCL-204ENST00000436439 CFBP00751 764 aa12.49□□□□□ -0.41
HMGCL-204ENST00000436439 EIF2AK2P19525 551 aaKnown RBP12.49□□□□□ -0.41
HMGCL-204ENST00000436439 MRPL12P52815 198 aaKnown RBP12.49□□□□□ -0.41
HMGCL-204ENST00000436439 CHMP4BP1P59074 171 aa12.49□□□□□ -0.41
HMGCL-204ENST00000436439 RESTQ13127 1097 aa12.49□□□□□ -0.41
HMGCL-204ENST00000436439 BRDTQ58F21 947 aaPredicted RBP12.49□□□□□ -0.41
HMGCL-204ENST00000436439 KRT40Q6A162 431 aa12.49□□□□□ -0.41
HMGCL-204ENST00000436439 NSUN6Q8TEA1 469 aaKnown RBP12.49□□□□□ -0.41
HMGCL-204ENST00000436439 KAT2BQ92831 832 aa12.49□□□□□ -0.41
HMGCL-204ENST00000436439 RRP36Q96EU6 259 aaKnown RBP12.49□□□□□ -0.41
HMGCL-204ENST00000436439 RMDN3Q96TC7 470 aa12.49□□□□□ -0.41
HMGCL-204ENST00000436439 MRPL11Q9Y3B7 192 aaKnown RBP12.49□□□□□ -0.41
HMGCL-204ENST00000436439 SLC4A7Q9Y6M7 1214 aa12.49□□□□□ -0.41
HMGCL-204ENST00000436439 KPNA6O60684 536 aa12.48□□□□□ -0.41
HMGCL-204ENST00000436439 GH1P01241 217 aa12.48□□□□□ -0.41
HMGCL-204ENST00000436439 MMP1P03956 469 aa12.48□□□□□ -0.41
HMGCL-204ENST00000436439 IQCF3P0C7M6 154 aa12.48□□□□□ -0.41
HMGCL-204ENST00000436439 U2AF2P26368 475 aaKnown RBP eCLIP12.48□□□□□ -0.41
HMGCL-204ENST00000436439 HSD17B4P51659 736 aa12.48□□□□□ -0.41
HMGCL-204ENST00000436439 PTPN11Q06124 597 aaPredicted RBP12.48□□□□□ -0.41
HMGCL-204ENST00000436439 STXBP2Q15833 593 aa12.48□□□□□ -0.41
HMGCL-204ENST00000436439 ARHGEF16Q5VV41 709 aa12.48□□□□□ -0.41
HMGCL-204ENST00000436439 GDF6Q6KF10 455 aaPredicted RBP12.48□□□□□ -0.41
HMGCL-204ENST00000436439 BRAPQ7Z569 592 aa12.48□□□□□ -0.41
HMGCL-204ENST00000436439 MCF2L2Q86YR7 1114 aa12.48□□□□□ -0.41
HMGCL-204ENST00000436439 IWS1Q96ST2 819 aa12.48□□□□□ -0.41
HMGCL-204ENST00000436439 PHF20Q9BVI0 1012 aa12.48□□□□□ -0.41
HMGCL-204ENST00000436439 MAF1Q9H063 256 aa12.48□□□□□ -0.41
HMGCL-204ENST00000436439 SLC28A3Q9HAS3 691 aa12.48□□□□□ -0.41
HMGCL-204ENST00000436439 PXMP2Q9NR77 195 aa12.48□□□□□ -0.41
HMGCL-204ENST00000436439 COL4A4P53420 1690 aaPredicted RBP12.47□□□□□ -0.41
HMGCL-204ENST00000436439 PITPNM1O00562 1244 aa12.47□□□□□ -0.41
HMGCL-204ENST00000436439 RGS20O76081 388 aa12.47□□□□□ -0.41
HMGCL-204ENST00000436439 NR3C2P08235 984 aa12.47□□□□□ -0.41
HMGCL-204ENST00000436439 PFKMP08237 780 aa12.47□□□□□ -0.41
HMGCL-204ENST00000436439 ATP2A2P16615 1042 aaKnown RBP12.47□□□□□ -0.41
HMGCL-204ENST00000436439 GHRHRQ02643 423 aa12.47□□□□□ -0.41
HMGCL-204ENST00000436439 GPNMBQ14956 572 aa12.47□□□□□ -0.41
HMGCL-204ENST00000436439 CCDC85BQ15834 202 aaPredicted RBP12.47□□□□□ -0.41
HMGCL-204ENST00000436439 ATL3Q6DD88 541 aa12.47□□□□□ -0.41
HMGCL-204ENST00000436439 DHX38Q92620 1227 aaKnown RBP12.47□□□□□ -0.41
HMGCL-204ENST00000436439 AMNQ9BXJ7 453 aa12.47□□□□□ -0.41
HMGCL-204ENST00000436439 FOXP1Q9H334 677 aaPredicted RBP12.47□□□□□ -0.41
HMGCL-204ENST00000436439 BARHL2Q9NY43 387 aa12.47□□□□□ -0.41
HMGCL-204ENST00000436439 SEC63Q9UGP8 760 aaKnown RBP12.47□□□□□ -0.41
HMGCL-204ENST00000436439 DDX41Q9UJV9 622 aaKnown RBP12.47□□□□□ -0.41
HMGCL-204ENST00000436439 PCDHA11Q9Y5I1 949 aa12.47□□□□□ -0.41
HMGCL-204ENST00000436439 CUL9Q8IWT3 2517 aa12.47□□□□□ -0.41
HMGCL-204ENST00000436439 PNMA6FA0A0J9YX94 578 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms