RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 DRP2Q13474 957 aa16.44■□□□□ 0.22
TOP3B-206ENST00000436282 SLC9C1Q4G0N8 1177 aa16.44■□□□□ 0.22
TOP3B-206ENST00000436282 RNF187Q5TA31 235 aaPredicted RBP16.44■□□□□ 0.22
TOP3B-206ENST00000436282 PRR5LQ6MZQ0 368 aa16.44■□□□□ 0.22
TOP3B-206ENST00000436282 GUF1Q8N442 669 aaKnown RBP16.44■□□□□ 0.22
TOP3B-206ENST00000436282 ARFGAP2Q8N6H7 521 aa16.44■□□□□ 0.22
TOP3B-206ENST00000436282 CALML4Q96GE6 196 aa16.44■□□□□ 0.22
TOP3B-206ENST00000436282 INPP4AQ96PE3 977 aaPredicted RBP16.44■□□□□ 0.22
TOP3B-206ENST00000436282 MAD2L2Q9UI95 211 aa16.44■□□□□ 0.22
TOP3B-206ENST00000436282 BTDP43251 543 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 SMTNP53814 917 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 NAB2Q15742 525 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 UNC13DQ70J99 1090 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 TMC4Q7Z404 712 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 MMTAG2Q9BU76 263 aaKnown RBP16.43■□□□□ 0.22
TOP3B-206ENST00000436282 NUCKS1Q9H1E3 243 aaKnown RBP16.43■□□□□ 0.22
TOP3B-206ENST00000436282 TMBIM4Q9HC24 238 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 LRRC4BQ9NT99 713 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 PLAAQ9Y263 795 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 PVALEFA0A1B0GWK0 134 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 CCNT1O60563 726 aaKnown RBP16.43■□□□□ 0.22
TOP3B-206ENST00000436282 ATP2B2Q01814 1243 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 SLC35G1Q2M3R5 365 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 CEP85LQ5SZL2 805 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 LRIG3Q6UXM1 1119 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 SV2BQ7L1I2 683 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 KRT25Q7Z3Z0 450 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 MAATS1Q7Z4T9 603 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 ANKS1AQ92625 1134 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 SYN2Q92777 582 aaPredicted RBP16.43■□□□□ 0.22
TOP3B-206ENST00000436282 TMEM47Q9BQJ4 181 aa16.43■□□□□ 0.22
TOP3B-206ENST00000436282 GOLGA6L10A6NI86 522 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 CHUKO15111 745 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 CYTH3O43739 400 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 FTCDO95954 541 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 SERPING1P05155 500 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 LDHCP07864 332 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 TNNC1P63316 161 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 LETM2Q2VYF4 491 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 MEI1Q5TIA1 1274 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 C6orf89Q6UWU4 347 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 LRRC55Q6ZSA7 311 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 EIF1ADQ8N9N8 165 aaKnown RBP16.42■□□□□ 0.22
TOP3B-206ENST00000436282 JPH2Q9BR39 696 aaPredicted RBP16.42■□□□□ 0.22
TOP3B-206ENST00000436282 TACO1Q9BSH4 297 aaKnown RBP16.42■□□□□ 0.22
TOP3B-206ENST00000436282 VAT1LQ9HCJ6 419 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 CD209Q9NNX6 404 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 PLCB1Q9NQ66 1216 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 CEP72Q9P209 647 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 PCDHGC5Q9Y5F6 944 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 E7EVH7 732 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 MYBP10242 640 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 TECP42680 631 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 IFT88Q13099 833 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 CCDC40Q4G0X9 1142 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 CCDC13Q8IYE1 715 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 TEX11Q8IYF3 940 aa16.42■□□□□ 0.22
TOP3B-206ENST00000436282 RAD51CO43502 376 aa16.41■□□□□ 0.22
TOP3B-206ENST00000436282 RASA1P20936 1047 aa16.41■□□□□ 0.22
TOP3B-206ENST00000436282 DNA2P51530 1060 aa16.41■□□□□ 0.22
TOP3B-206ENST00000436282 KCNMA1Q12791 1236 aa16.41■□□□□ 0.22
TOP3B-206ENST00000436282 NONOQ15233 471 aaKnown RBP eCLIP16.41■□□□□ 0.22
TOP3B-206ENST00000436282 SFMBT2Q5VUG0 894 aa16.41■□□□□ 0.22
TOP3B-206ENST00000436282 TAF1DQ9H5J8 278 aaPredicted RBP16.41■□□□□ 0.22
TOP3B-206ENST00000436282 KLC4Q9NSK0 619 aa16.41■□□□□ 0.22
TOP3B-206ENST00000436282 MYMKA6NI61 221 aa16.41■□□□□ 0.22
TOP3B-206ENST00000436282 RASSF9O75901 435 aa16.41■□□□□ 0.22
TOP3B-206ENST00000436282 CCDC172P0C7W6 258 aa16.41■□□□□ 0.22
TOP3B-206ENST00000436282 C3orf20Q8ND61 904 aa16.41■□□□□ 0.22
TOP3B-206ENST00000436282 ZMYND12Q9H0C1 365 aa16.41■□□□□ 0.22
TOP3B-206ENST00000436282 STK17AQ9UEE5 414 aa16.41■□□□□ 0.22
TOP3B-206ENST00000436282 BTAF1O14981 1849 aa16.41■□□□□ 0.22
TOP3B-206ENST00000436282 KLRC1P26715 233 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 HOXA7P31268 230 aaPredicted RBP16.4■□□□□ 0.22
TOP3B-206ENST00000436282 NT5C2P49902 561 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 TRADDQ15628 312 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 MEX3CQ5U5Q3 659 aaKnown RBP16.4■□□□□ 0.22
TOP3B-206ENST00000436282 FOXR2Q6PJQ5 311 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 USP38Q8NB14 1042 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 CYFIP2Q96F07 1278 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 EYA3Q99504 573 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 RTFDC1Q9BY42 306 aaPredicted RBP16.4■□□□□ 0.22
TOP3B-206ENST00000436282 TANGO6Q9C0B7 1094 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 ISCUQ9H1K1 167 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 NLRC4Q9NPP4 1024 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 BLOC1S4Q9NUP1 217 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 GGA1Q9UJY5 639 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 KLRF2D3W0D1 207 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 C6orf229H3BNL8 230 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 TLR2O60603 784 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 MFSD14BQ5SR56 506 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 NEK8Q86SG6 692 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 ZKSCAN4Q969J2 545 aaPredicted RBP16.4■□□□□ 0.22
TOP3B-206ENST00000436282 TSG101Q99816 390 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 ACTR5Q9H9F9 607 aaPredicted RBP16.4■□□□□ 0.22
TOP3B-206ENST00000436282 TMEM59LQ9UK28 342 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 GCOM1H8Y6P7 765 aaPredicted RBP16.4■□□□□ 0.22
TOP3B-206ENST00000436282 MYZAPP0CAP1 466 aa16.4■□□□□ 0.22
TOP3B-206ENST00000436282 HPDP32754 393 aaPredicted RBP16.4■□□□□ 0.22
TOP3B-206ENST00000436282 RDXP35241 583 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms