RNA–Protein interactions for RNA: ENST00000435606.1

LDLRAD4-204, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,032 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-204ENST00000435606 FARP1Q9Y4F1 1045 aaPredicted RBP11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 OVOS2A0A0G2JMS6 1433 aa11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 OVOS2A0A0J9YW53 1432 aa11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 OVOS2Q6IE36 1432 aa11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 TCP1P17987 556 aaKnown RBP11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 STX1BP61266 288 aa11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 NFX1Q12986 1120 aaKnown RBP11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 TBC1D10BQ4KMP7 808 aaPredicted RBP11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 RAET1EQ8TD07 263 aa11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 PGBD1Q96JS3 809 aa11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 MSTO1Q9BUK6 570 aa11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 ZHX2Q9Y6X8 837 aa11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 TTC4O95801 387 aa11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 CRKP46108 304 aa11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 MECOMQ03112 1051 aa11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 SPZ1Q9BXG8 430 aa11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 SYNMO15061 1565 aa11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 PER1O15534 1290 aaPredicted RBP11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 PDIA3P30101 505 aaKnown RBP11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 MMP19Q99542 508 aa11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 OLA1Q9NTK5 396 aaKnown RBP11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 KLHL14Q9P2G3 628 aa11.53□□□□□ -0.56
LDLRAD4-204ENST00000435606 BUB1O43683 1085 aa11.52□□□□□ -0.56
LDLRAD4-204ENST00000435606 ADKP55263 362 aaKnown RBP11.52□□□□□ -0.56
LDLRAD4-204ENST00000435606 PSMD2Q13200 908 aa11.52□□□□□ -0.56
LDLRAD4-204ENST00000435606 N4BP2L2Q92802 583 aaPredicted RBP11.52□□□□□ -0.56
LDLRAD4-204ENST00000435606 ZNF653Q96CK0 615 aa11.52□□□□□ -0.56
LDLRAD4-204ENST00000435606 LRGUKQ96M69 825 aa11.52□□□□□ -0.56
LDLRAD4-204ENST00000435606 SRP68Q9UHB9 627 aaKnown RBP11.52□□□□□ -0.56
LDLRAD4-204ENST00000435606 USP6P35125 1406 aa11.52□□□□□ -0.56
LDLRAD4-204ENST00000435606 ECE2O60344 883 aa11.52□□□□□ -0.56
LDLRAD4-204ENST00000435606 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.52□□□□□ -0.56
LDLRAD4-204ENST00000435606 CABS1Q96KC9 395 aa11.52□□□□□ -0.56
LDLRAD4-204ENST00000435606 LBHD1Q9BQE6 289 aaPredicted RBP11.52□□□□□ -0.56
LDLRAD4-204ENST00000435606 PUS3Q9BZE2 481 aaKnown RBP11.52□□□□□ -0.56
LDLRAD4-204ENST00000435606 CDK8P49336 464 aa11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 TRIM42Q8IWZ5 723 aa11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 RNF10Q8N5U6 811 aaKnown RBP11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 OGFRQ9NZT2 677 aa11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 SLC13A4Q9UKG4 626 aa11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 ARHGAP42A6NI28 874 aa11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 PPP6R2O75170 966 aa11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 GTF2A1P52655 376 aaPredicted RBP11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 OSTNP61366 133 aa11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 MESDQ14696 234 aa11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 SRRM1Q8IYB3 904 aaKnown RBP11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 FNDC3AQ9Y2H6 1198 aaKnown RBP11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 TXNDC9O14530 226 aa11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 CLCN1P35523 988 aa11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 TWF2Q6IBS0 349 aaKnown RBP11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 SYNE4Q8N205 404 aa11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 DHX38Q92620 1227 aaKnown RBP11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 NVLO15381 856 aaKnown RBP11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 EIF2AK2P19525 551 aaKnown RBP11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 SOX5P35711 763 aa11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 COG7P83436 770 aa11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 NUDCD1Q96RS6 583 aa11.52□□□□□ -0.57
LDLRAD4-204ENST00000435606 TTI1O43156 1089 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 GRIN3BO60391 1043 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 BUB1BO60566 1050 aaPredicted RBP11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 FCER1AP12319 257 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 PTH1RQ03431 593 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 PIGBQ92521 554 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 GSDMAQ96QA5 445 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 PPP1R16BQ96T49 567 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 XPO4Q9C0E2 1151 aaKnown RBP11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 PAMP19021 973 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 AP3B2Q13367 1082 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 C10orf76Q5T2E6 689 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 YAF2Q8IY57 180 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 GOLGA8SH3BPF8 625 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 EEF1GP26641 437 aaKnown RBP11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 OR6B2Q6IFH4 312 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 KLC3Q6P597 504 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 PODNQ7Z5L7 613 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 ORC6Q9Y5N6 252 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 HGSO14964 777 aaPredicted RBP11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 CASP2P42575 452 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 DARS2Q6PI48 645 aaKnown RBP11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 ATP6V0A4Q9HBG4 840 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 DCLK2Q8N568 766 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 TLK1Q9UKI8 766 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 ERBB3P21860 1342 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 FAM170AA1A519 330 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 ZBTB7AO95365 584 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 MTMR1Q13613 665 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 ZBTB9Q96C00 473 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 TUBGCP2Q9BSJ2 902 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 Q9H521 79 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 SPON1Q9HCB6 807 aa11.51□□□□□ -0.57
LDLRAD4-204ENST00000435606 KRT1P04264 644 aa11.5□□□□□ -0.57
LDLRAD4-204ENST00000435606 FKBP3Q00688 224 aaKnown RBP11.5□□□□□ -0.57
LDLRAD4-204ENST00000435606 GCNT4Q9P109 453 aa11.5□□□□□ -0.57
LDLRAD4-204ENST00000435606 PTCH1Q13635 1447 aa11.5□□□□□ -0.57
LDLRAD4-204ENST00000435606 GUCY2FP51841 1108 aa11.5□□□□□ -0.57
LDLRAD4-204ENST00000435606 MCUQ8NE86 351 aa11.5□□□□□ -0.57
LDLRAD4-204ENST00000435606 BEST2Q8NFU1 509 aa11.5□□□□□ -0.57
LDLRAD4-204ENST00000435606 OR6B3Q8NGW1 331 aa11.5□□□□□ -0.57
LDLRAD4-204ENST00000435606 PCIF1Q9H4Z3 704 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms