RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 OTUD6AQ7L8S5 288 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 STAG2Q8N3U4 1231 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 TRIM51Q9BSJ1 452 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 THAP9Q9H5L6 903 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 TMEM165Q9HC07 324 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 FGFR1OP2Q9NVK5 253 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 LMCD1Q9NZU5 365 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 SLC12A4Q9UP95 1085 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 RPS6KL1Q9Y6S9 549 aa8.15□□□□□ -1.1
CPSF6-202ENST00000435070 VEGFAP15692 232 aaPredicted RBP8.15□□□□□ -1.11
CPSF6-202ENST00000435070 IGHMBP2P38935 993 aaKnown RBP8.15□□□□□ -1.11
CPSF6-202ENST00000435070 RFC5P40937 340 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 MSH2P43246 934 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 RAD23BP54727 409 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 RPS6KA1Q15418 735 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 TMEM154Q6P9G4 183 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 CNBD1Q8NA66 436 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 USP38Q8NB14 1042 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 RPS6KC1Q96S38 1066 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 ZHX3Q9H4I2 956 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 AZI2Q9H6S1 392 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 NKX1-2Q9UD57 310 aaPredicted RBP8.15□□□□□ -1.11
CPSF6-202ENST00000435070 RGPD1P0DJD0 1748 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 ANKRD62A6NC57 917 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 CFAP73A6NFT4 308 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 KRIT1O00522 736 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 PYGBP11216 843 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 LIFRP42702 1097 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 SCNN1BP51168 640 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 LRIG3Q6UXM1 1119 aa8.15□□□□□ -1.11
CPSF6-202ENST00000435070 ROR2Q01974 943 aaKnown RBP8.14□□□□□ -1.11
CPSF6-202ENST00000435070 ANKRD42Q8N9B4 389 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 INPP4AQ96PE3 977 aaPredicted RBP8.14□□□□□ -1.11
CPSF6-202ENST00000435070 A6NHS1 94 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 RARAP10276 462 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 ADD2P35612 726 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 RIPK1Q13546 671 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 METTL24Q5JXM2 366 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 ANO7Q6IWH7 933 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 IFNL3Q8IZI9 196 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 MIGA1Q8NAN2 632 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 HELBQ8NG08 1087 aaPredicted RBP8.14□□□□□ -1.11
CPSF6-202ENST00000435070 P2RX5Q93086 422 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 H7C1W4 665 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 ECHS1P30084 290 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 RAPGEF1Q13905 1077 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 SLMAPQ14BN4 828 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 AKNAD1Q5T1N1 836 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 SPATA24Q86W54 205 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 LMNTD2Q8IXW0 634 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 DRAXINQ8NBI3 349 aaPredicted RBP8.14□□□□□ -1.11
CPSF6-202ENST00000435070 RGL1Q9NZL6 768 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 SNAP23O00161 211 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 RGS16O15492 202 aaPredicted RBP8.14□□□□□ -1.11
CPSF6-202ENST00000435070 SLC5A9Q2M3M2 681 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 MIIPQ5JXC2 388 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 DAAM2Q86T65 1068 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 ZNF317Q96PQ6 595 aaPredicted RBP8.14□□□□□ -1.11
CPSF6-202ENST00000435070 SRRM3A6NNA2 597 aaPredicted RBP8.14□□□□□ -1.11
CPSF6-202ENST00000435070 LUC7L3O95232 432 aaKnown RBP8.14□□□□□ -1.11
CPSF6-202ENST00000435070 PDE6AP16499 860 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 AGBL2Q5U5Z8 902 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 NUGGCQ68CJ6 796 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 IP6K1Q92551 441 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 DBR1Q9UK59 544 aaKnown RBP8.14□□□□□ -1.11
CPSF6-202ENST00000435070 MYH6P13533 1939 aa8.14□□□□□ -1.11
CPSF6-202ENST00000435070 FOXO6A8MYZ6 492 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 LRRC23Q53EV4 343 aaPredicted RBP8.13□□□□□ -1.11
CPSF6-202ENST00000435070 MFN1Q8IWA4 741 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 ETNK1Q9HBU6 452 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 EPB41L4AQ9HCS5 686 aaPredicted RBP8.13□□□□□ -1.11
CPSF6-202ENST00000435070 AMOTL2Q9Y2J4 779 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 MON2Q7Z3U7 1717 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 WDR19Q8NEZ3 1342 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 F8VZ95 297 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 ATP2C1P98194 919 aaPredicted RBP8.13□□□□□ -1.11
CPSF6-202ENST00000435070 HHATQ5VTY9 493 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 CWC25Q9NXE8 425 aaPredicted RBP8.13□□□□□ -1.11
CPSF6-202ENST00000435070 CHD1O14646 1710 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 TCP11X1B4DZS4 312 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 RNF8O76064 485 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 MKRN4PQ13434 485 aaPredicted RBP8.13□□□□□ -1.11
CPSF6-202ENST00000435070 BICDL1Q6ZP65 573 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 MARCH10Q8NA82 808 aaPredicted RBP8.13□□□□□ -1.11
CPSF6-202ENST00000435070 GDAP1Q8TB36 358 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 CNKSR1Q969H4 720 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 TCHPQ9BT92 498 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 GSTA1P08263 222 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 PLTPP55058 493 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 UBAP2Q5T6F2 1119 aaKnown RBP8.13□□□□□ -1.11
CPSF6-202ENST00000435070 ARHGAP22Q7Z5H3 698 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 TMC3Q7Z5M5 1100 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 MAGEB6Q8N7X4 407 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 BSDC1Q9NW68 430 aaPredicted RBP8.13□□□□□ -1.11
CPSF6-202ENST00000435070 hCG_2014768A0A024R1R8 64 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 A0A087X0T9 212 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 FAM228BP0C875 321 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 CCNE1P24864 410 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 CASP7P55210 303 aa8.13□□□□□ -1.11
CPSF6-202ENST00000435070 ADAM9Q13443 819 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms