RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 IDEP14735 1019 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 MREGQ8N565 214 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 MRPL47Q9HD33 250 aaKnown RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 A0A1B0GUL6 1792 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 ERICH4A6NGS2 130 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 GOLGA8CPA6NN73 597 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 CAMTA2O94983 1202 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 FECHP22830 423 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 CHRNA3P32297 505 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 FNTAP49354 379 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 WDR44Q5JSH3 913 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 SLC9A9Q8IVB4 645 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 ALKBH8Q96BT7 664 aaKnown RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 NAT9Q9BTE0 207 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 DBR1Q9UK59 544 aaKnown RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 ZDHHC9Q9Y397 364 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 C19orf81C9J6K1 198 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 TGFB3P10600 412 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 MAP7D3Q8IWC1 876 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 MASTLQ96GX5 879 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 CCDC28BQ9BUN5 200 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 TRIM9Q9C026 710 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 PSTPIP2Q9H939 334 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 KNL1Q8NG31 2342 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 UFL1O94874 794 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 SERPINB4P48594 390 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 BTNL9Q6UXG8 535 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 DNAJC10Q8IXB1 793 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 MIS18AQ9NYP9 233 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 GOLGA8MH3BSY2 632 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 ASPHQ12797 758 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 SETDB1Q15047 1291 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 ARHGEF6Q15052 776 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 LCA5Q86VQ0 697 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 CXorf38Q8TB03 319 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 FAM227BQ96M60 508 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 RPS6KC1Q96S38 1066 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 TTC1Q99614 292 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 CNTNAP1P78357 1384 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 FLT1P17948 1338 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 ZNF233A6NK53 670 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 ERCC6LQ2NKX8 1250 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 TMCO4Q5TGY1 634 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 CCDC129Q6ZRS4 1044 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 CCNJLQ8IV13 435 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 ACTR5Q9H9F9 607 aaPredicted RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 STK32BQ9NY57 414 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 PCDHA1Q9Y5I3 950 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 SCN4AP35499 1836 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 PIEZO1Q92508 2521 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 ECM29Q5VYK3 1845 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 IGF2BP3O00425 579 aaKnown RBP eCLIP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 WDR46O15213 610 aaKnown RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 RFC5P40937 340 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 PHKA1P46020 1223 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 ZNF513Q8N8E2 541 aaPredicted RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 ATP2A3Q93084 1043 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 UTP11Q9Y3A2 253 aaKnown RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 MYH14Q7Z406 1995 aaKnown RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 KLRF2D3W0D1 207 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 MARSP56192 900 aaKnown RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 MCL1Q07820 350 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 XPO4Q9C0E2 1151 aaKnown RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 DDX41Q9UJV9 622 aaKnown RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 TTC7AQ9ULT0 858 aaPredicted RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 ACTL7BQ9Y614 415 aa4.11□□□□□ -1.75
SHPRH-205ENST00000433355 EPN1Q9Y6I3 576 aaPredicted RBP4.11□□□□□ -1.75
SHPRH-205ENST00000433355 NBPF26B4DH59 902 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 FAM160B1Q5W0V3 765 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 NBPF10Q6P3W6 841 aaKnown RBP4.1□□□□□ -1.75
SHPRH-205ENST00000433355 NBPF15Q8N660 670 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.1□□□□□ -1.75
SHPRH-205ENST00000433355 RBM41Q96IZ5 413 aaKnown RBP4.1□□□□□ -1.75
SHPRH-205ENST00000433355 BRD8Q9H0E9 1235 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 C1orf112Q9NSG2 853 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 IFNKQ9P0W0 207 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.1□□□□□ -1.75
SHPRH-205ENST00000433355 LTBP3Q9NS15 1303 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 DGAT1O75907 488 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 TSHRP16473 764 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 KRT15P19012 456 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 FOXO4P98177 505 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 MAPK8IP2Q13387 824 aaPredicted RBP4.1□□□□□ -1.75
SHPRH-205ENST00000433355 NEDD9Q14511 834 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 ENAHQ8N8S7 591 aaPredicted RBP4.1□□□□□ -1.75
SHPRH-205ENST00000433355 GRAMD1AQ96CP6 724 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 NOC4LQ9BVI4 516 aaKnown RBP4.1□□□□□ -1.75
SHPRH-205ENST00000433355 TRPC7Q9HCX4 862 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 NKIRAS1Q9NYS0 192 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 CACNA1HO95180 2353 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 NFKBIAP25963 317 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 DPP8Q6V1X1 898 aaPredicted RBP4.1□□□□□ -1.75
SHPRH-205ENST00000433355 ANKRD7Q92527 254 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 ZHX3Q9H4I2 956 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 PARVGQ9HBI0 331 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 IGSF9BQ9UPX0 1349 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 F8W8V4 182 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 PJA2O43164 708 aa4.1□□□□□ -1.75
SHPRH-205ENST00000433355 RAB11FIP4Q86YS3 637 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms