RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 ARMC9Q7Z3E5 817 aa16.27■□□□□ 0.19
DDX56-205ENST00000433257 SUPT20HQ8NEM7 779 aa16.27■□□□□ 0.19
DDX56-205ENST00000433257 RIN2Q8WYP3 895 aaPredicted RBP16.27■□□□□ 0.19
DDX56-205ENST00000433257 GPKOWQ92917 476 aaPredicted RBP eCLIP16.27■□□□□ 0.195e-7■■■■■ 43.5
DDX56-205ENST00000433257 MCM9Q9NXL9 1143 aa16.27■□□□□ 0.19
DDX56-205ENST00000433257 LRRC53A6NM62 1247 aa16.26■□□□□ 0.19
DDX56-205ENST00000433257 CCNT1O60563 726 aaKnown RBP16.26■□□□□ 0.19
DDX56-205ENST00000433257 ZMYND10O75800 440 aa16.26■□□□□ 0.19
DDX56-205ENST00000433257 FSBPO95073 299 aa16.26■□□□□ 0.19
DDX56-205ENST00000433257 TSPY3P0CV98 308 aa16.26■□□□□ 0.19
DDX56-205ENST00000433257 TSPY8P0CW00 308 aa16.26■□□□□ 0.19
DDX56-205ENST00000433257 CUL1Q13616 776 aa16.26■□□□□ 0.19
DDX56-205ENST00000433257 RRAGAQ7L523 313 aa16.26■□□□□ 0.19
DDX56-205ENST00000433257 IQCKQ8N0W5 287 aa16.26■□□□□ 0.19
DDX56-205ENST00000433257 CNPY4Q8N129 248 aa16.26■□□□□ 0.19
DDX56-205ENST00000433257 BAP1Q92560 729 aa16.26■□□□□ 0.19
DDX56-205ENST00000433257 LARP4BQ92615 738 aaKnown RBP16.26■□□□□ 0.19
DDX56-205ENST00000433257 LRRC45Q96CN5 670 aa16.26■□□□□ 0.19
DDX56-205ENST00000433257 PSMD1Q99460 953 aa16.26■□□□□ 0.19
DDX56-205ENST00000433257 EPN3Q9H201 632 aa16.26■□□□□ 0.19
DDX56-205ENST00000433257 DMGDHQ9UI17 866 aaKnown RBP16.26■□□□□ 0.19
DDX56-205ENST00000433257 TAF1P21675 1872 aa16.26■□□□□ 0.19
DDX56-205ENST00000433257 ATAD5Q96QE3 1844 aa16.26■□□□□ 0.19
DDX56-205ENST00000433257 CDR1P51861 262 aa16.25■□□□□ 0.19
DDX56-205ENST00000433257 FKBP3Q00688 224 aaKnown RBP16.25■□□□□ 0.19
DDX56-205ENST00000433257 MTMR3Q13615 1198 aa16.25■□□□□ 0.19
DDX56-205ENST00000433257 NAB2Q15742 525 aa16.25■□□□□ 0.19
DDX56-205ENST00000433257 KLHDC7AQ5VTJ3 777 aa16.25■□□□□ 0.19
DDX56-205ENST00000433257 PPP1R18Q6NYC8 613 aa16.25■□□□□ 0.19
DDX56-205ENST00000433257 NFRKBQ6P4R8 1299 aa16.25■□□□□ 0.19
DDX56-205ENST00000433257 TAX1BP1Q86VP1 789 aa16.25■□□□□ 0.19
DDX56-205ENST00000433257 DZIP1Q86YF9 867 aaKnown RBP16.25■□□□□ 0.19
DDX56-205ENST00000433257 OTUD6BQ8N6M0 293 aa16.25■□□□□ 0.19
DDX56-205ENST00000433257 KIAA0895Q8NCT3 520 aa16.25■□□□□ 0.19
DDX56-205ENST00000433257 WDR66Q8TBY9 1149 aa16.25■□□□□ 0.19
DDX56-205ENST00000433257 TAF4BQ92750 862 aa16.25■□□□□ 0.19
DDX56-205ENST00000433257 PBKQ96KB5 322 aa16.25■□□□□ 0.19
DDX56-205ENST00000433257 TLR10Q9BXR5 811 aa16.25■□□□□ 0.19
DDX56-205ENST00000433257 SEMA6BQ9H3T3 888 aa16.25■□□□□ 0.19
DDX56-205ENST00000433257 A1CFQ9NQ94 594 aaKnown RBP16.25■□□□□ 0.19
DDX56-205ENST00000433257 BMP2KQ9NSY1 1161 aaPredicted RBP16.25■□□□□ 0.19
DDX56-205ENST00000433257 BZW2Q9Y6E2 419 aaKnown RBP16.25■□□□□ 0.19
DDX56-205ENST00000433257 DUSP10Q9Y6W6 482 aa16.25■□□□□ 0.19
DDX56-205ENST00000433257 NAV1Q8NEY1 1877 aa16.25■□□□□ 0.19
DDX56-205ENST00000433257 PP2D1A8MPX8 630 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 NFKBIEO00221 500 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 TULP1O00294 542 aaPredicted RBP16.24■□□□□ 0.19
DDX56-205ENST00000433257 MEFVO15553 781 aaPredicted RBP16.24■□□□□ 0.19
DDX56-205ENST00000433257 NMT2O60551 498 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 LMNB1P20700 586 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 KLK7P49862 253 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 MARSP56192 900 aaKnown RBP16.24■□□□□ 0.19
DDX56-205ENST00000433257 GPSM2P81274 684 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 RASSF7Q02833 373 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 PPP4R3CPQ6ZMV5 832 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 RUFY4Q6ZNE9 571 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 GSPT2Q8IYD1 628 aaKnown RBP16.24■□□□□ 0.19
DDX56-205ENST00000433257 CALR3Q96L12 384 aaKnown RBP16.24■□□□□ 0.19
DDX56-205ENST00000433257 ZIM3Q96PE6 472 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 MLXIPQ9HAP2 919 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 PCDHGC5Q9Y5F6 944 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 LTBP3Q9NS15 1303 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 KDM3AQ9Y4C1 1321 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 SMCO2A6NFE2 343 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 C6orf229H3BNL8 230 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 HEXIM1O94992 359 aaKnown RBP16.24■□□□□ 0.19
DDX56-205ENST00000433257 NAP1L1P55209 391 aaKnown RBP16.24■□□□□ 0.19
DDX56-205ENST00000433257 PPP4CP60510 307 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 BIRC3Q13489 604 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 CDC37Q16543 378 aaPredicted RBP16.24■□□□□ 0.19
DDX56-205ENST00000433257 LETM2Q2VYF4 491 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 TDRD12Q587J7 1177 aaKnown RBP16.24■□□□□ 0.19
DDX56-205ENST00000433257 KRT79Q5XKE5 535 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 REXO1Q8N1G1 1221 aaKnown RBP16.24■□□□□ 0.19
DDX56-205ENST00000433257 RASGRP4Q8TDF6 673 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 ZNF384Q8TF68 577 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 P3H4Q92791 437 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 ATP6V1G3Q96LB4 118 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 ACTR5Q9H9F9 607 aaPredicted RBP16.24■□□□□ 0.19
DDX56-205ENST00000433257 FAM207AQ9NSI2 230 aaPredicted RBP16.24■□□□□ 0.19
DDX56-205ENST00000433257 COL4A3BPQ9Y5P4 624 aa16.24■□□□□ 0.19
DDX56-205ENST00000433257 KLRF2D3W0D1 207 aa16.23■□□□□ 0.19
DDX56-205ENST00000433257 FCER1AP12319 257 aa16.23■□□□□ 0.19
DDX56-205ENST00000433257 HSPA9P38646 679 aaKnown RBP16.23■□□□□ 0.19
DDX56-205ENST00000433257 CLUL1Q15846 466 aa16.23■□□□□ 0.19
DDX56-205ENST00000433257 SLC18A3Q16572 532 aa16.23■□□□□ 0.19
DDX56-205ENST00000433257 TTMPQ5BVD1 217 aa16.23■□□□□ 0.19
DDX56-205ENST00000433257 SPDYCQ5MJ68 293 aa16.23■□□□□ 0.19
DDX56-205ENST00000433257 MEI1Q5TIA1 1274 aa16.23■□□□□ 0.19
DDX56-205ENST00000433257 KRT26Q7Z3Y9 468 aa16.23■□□□□ 0.19
DDX56-205ENST00000433257 MYOCDQ8IZQ8 938 aa16.23■□□□□ 0.19
DDX56-205ENST00000433257 PRPF38AQ8NAV1 312 aaKnown RBP16.23■□□□□ 0.19
DDX56-205ENST00000433257 LMBR1Q8WVP7 490 aa16.23■□□□□ 0.19
DDX56-205ENST00000433257 RAD54LQ92698 747 aa16.23■□□□□ 0.19
DDX56-205ENST00000433257 CABS1Q96KC9 395 aa16.23■□□□□ 0.19
DDX56-205ENST00000433257 GDAP1L1Q96MZ0 367 aa16.23■□□□□ 0.19
DDX56-205ENST00000433257 MYCBPQ99417 103 aaPredicted RBP16.23■□□□□ 0.19
DDX56-205ENST00000433257 EYA3Q99504 573 aa16.23■□□□□ 0.19
DDX56-205ENST00000433257 NCAPGQ9BPX3 1015 aa16.23■□□□□ 0.19
DDX56-205ENST00000433257 NT5C3AQ9H0P0 336 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms