RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 UBASH3AP57075 661 aa11.87□□□□□ -0.51
CCDC171-202ENST00000432954 ITGB3BPQ13352 177 aaPredicted RBP11.87□□□□□ -0.51
CCDC171-202ENST00000432954 METTL21CQ5VZV1 264 aa11.87□□□□□ -0.51
CCDC171-202ENST00000432954 ABTB2Q8N961 1025 aa11.87□□□□□ -0.51
CCDC171-202ENST00000432954 RHOXF2Q9BQY4 288 aa11.87□□□□□ -0.51
CCDC171-202ENST00000432954 ZHX3Q9H4I2 956 aa11.87□□□□□ -0.51
CCDC171-202ENST00000432954 SERHL2Q9H4I8 314 aa11.87□□□□□ -0.51
CCDC171-202ENST00000432954 PLCB1Q9NQ66 1216 aa11.87□□□□□ -0.51
CCDC171-202ENST00000432954 PIH1D3Q9NQM4 214 aaKnown RBP11.87□□□□□ -0.51
CCDC171-202ENST00000432954 CCDC177Q9NQR7 707 aaPredicted RBP11.87□□□□□ -0.51
CCDC171-202ENST00000432954 CTTNBP2NLQ9P2B4 639 aa11.87□□□□□ -0.51
CCDC171-202ENST00000432954 NFE2L3Q9Y4A8 694 aa11.87□□□□□ -0.51
CCDC171-202ENST00000432954 TLL2Q9Y6L7 1015 aa11.87□□□□□ -0.51
CCDC171-202ENST00000432954 CTAGE15A4D2H0 777 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 CCDC169A6NNP5 214 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 ERVV-2B6SEH9 535 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 IKBKBO14920 756 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 ARHGAP6O43182 974 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 STRNO43815 780 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 CTAGE8P0CG41 777 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 CHRNB1P11230 501 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 CTRB1P17538 263 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 GNAZP19086 355 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 STAT3P40763 770 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 SERPINB4P48594 390 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 SP140Q13342 867 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 WASHC4Q2M389 1173 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 SYCP2LQ5T4T6 812 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 SNX30Q5VWJ9 437 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 INTS3Q68E01 1043 aaKnown RBP11.86□□□□□ -0.51
CCDC171-202ENST00000432954 CTRB2Q6GPI1 263 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 TTC23LQ6PF05 361 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 CTAGE6Q86UF2 777 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 CTAGE4Q8IX94 777 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 AADATQ8N5Z0 425 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 MLKLQ8NB16 471 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 OR7G1Q8NGA0 311 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 BRF1Q92994 677 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 GDAP1L1Q96MZ0 367 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 AIFM2Q9BRQ8 373 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 HERC2P3Q9BVR0 1158 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 PSTPIP2Q9H939 334 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 XAB2Q9HCS7 855 aaKnown RBP11.86□□□□□ -0.51
CCDC171-202ENST00000432954 CFL2Q9Y281 166 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 E9PMD0 336 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 KRT83P78385 493 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 ATP8B2P98198 1209 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 RELAQ04206 551 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 TNIP1Q15025 636 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 NFE2L2Q16236 605 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 MYLK3Q32MK0 819 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 VASH1Q7L8A9 365 aaPredicted RBP11.86□□□□□ -0.51
CCDC171-202ENST00000432954 PNMA8AQ86V59 439 aaPredicted RBP11.86□□□□□ -0.51
CCDC171-202ENST00000432954 CADM3Q8N126 398 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 CCDC12Q8WUD4 166 aaPredicted RBP11.86□□□□□ -0.51
CCDC171-202ENST00000432954 TBC1D20Q96BZ9 403 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 DNAJC18Q9H819 358 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 HYPKQ9NX55 129 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 HMGXB4Q9UGU5 601 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 AGAP1Q9UPQ3 857 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 TMA7Q9Y2S6 64 aaKnown RBP11.86□□□□□ -0.51
CCDC171-202ENST00000432954 RALGAPBQ86X10 1494 aa11.86□□□□□ -0.51
CCDC171-202ENST00000432954 A6NJR5 290 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 SPDYE16A6NNV3 312 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-202ENST00000432954 ELL2O00472 640 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-202ENST00000432954 TMCC2O75069 709 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 PDHA1P08559 390 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 NAGAP17050 411 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 MZF1P28698 734 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-202ENST00000432954 HSPA1LP34931 641 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 LIFRP42702 1097 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 AP2B1P63010 937 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 MKRN3Q13064 507 aaKnown RBP11.85□□□□□ -0.51
CCDC171-202ENST00000432954 STX1AQ16623 288 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 RASIP1Q5U651 963 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 CCDC102BQ68D86 513 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 SLC51BQ86UW2 128 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 CAND1Q86VP6 1230 aaKnown RBP11.85□□□□□ -0.51
CCDC171-202ENST00000432954 CCDC148Q8NFR7 591 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 CFAP61Q8NHU2 1237 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 FNDC8Q8TC99 324 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 EPS8L3Q8TE67 593 aaKnown RBP11.85□□□□□ -0.51
CCDC171-202ENST00000432954 ZSWIM4Q9H7M6 989 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 LAMC1P11047 1609 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 FAM135BQ49AJ0 1406 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 FBP2O00757 339 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 MUSKO15146 869 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 GLRX3O76003 335 aaKnown RBP11.85□□□□□ -0.51
CCDC171-202ENST00000432954 S100A6P06703 90 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 SPATA31D3P0C874 917 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 GZMAP12544 262 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 PLCG2P16885 1265 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 PPP2R1AP30153 589 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 HMOX2P30519 316 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 CCNFP41002 786 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 CTC1Q2NKJ3 1217 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 EAPPQ56P03 285 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-202ENST00000432954 C10orf62Q5T681 223 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-202ENST00000432954 OLFML2BQ68BL8 750 aa11.85□□□□□ -0.51
CCDC171-202ENST00000432954 PDXDC1Q6P996 788 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms