RNA–Protein interactions for RNA: ENST00000432588.5

ACTB-205, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 568 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-205ENST00000432588 CALM2P0DP24 149 aa18.66■□□□□ 0.58
ACTB-205ENST00000432588 CALM3P0DP25 149 aa18.66■□□□□ 0.58
ACTB-205ENST00000432588 THPOP40225 353 aa18.66■□□□□ 0.58
ACTB-205ENST00000432588 DEFB103AP81534 67 aa18.66■□□□□ 0.58
ACTB-205ENST00000432588 ADAMTS19Q8TE59 1207 aa18.66■□□□□ 0.58
ACTB-205ENST00000432588 ATP6V0A1Q93050 837 aa18.66■□□□□ 0.58
ACTB-205ENST00000432588 EPOPA6NHQ4 379 aa18.65■□□□□ 0.58
ACTB-205ENST00000432588 RSPH10B2B2RC85 870 aa18.65■□□□□ 0.58
ACTB-205ENST00000432588 PIK3CDO00329 1044 aa18.65■□□□□ 0.58
ACTB-205ENST00000432588 LGR5O75473 907 aa18.65■□□□□ 0.58
ACTB-205ENST00000432588 GJB5O95377 273 aa18.65■□□□□ 0.58
ACTB-205ENST00000432588 RSPH10BP0C881 870 aa18.65■□□□□ 0.58
ACTB-205ENST00000432588 SMIM10L2AP0DMW4 78 aa18.65■□□□□ 0.58
ACTB-205ENST00000432588 SMIM10L2BP0DMW5 78 aa18.65■□□□□ 0.58
ACTB-205ENST00000432588 GNAT1P11488 350 aa18.65■□□□□ 0.58
ACTB-205ENST00000432588 PCNX4Q63HM2 1172 aa18.65■□□□□ 0.58
ACTB-205ENST00000432588 CYFIP1Q7L576 1253 aa18.65■□□□□ 0.58
ACTB-205ENST00000432588 WNT8BQ93098 351 aa18.65■□□□□ 0.58
ACTB-205ENST00000432588 UHRF1Q96T88 793 aaPredicted RBP18.65■□□□□ 0.58
ACTB-205ENST00000432588 RAD9AQ99638 391 aa18.65■□□□□ 0.58
ACTB-205ENST00000432588 RTEL1Q9NZ71 1219 aa18.65■□□□□ 0.58
ACTB-205ENST00000432588 ZNF215Q9UL58 517 aaPredicted RBP18.65■□□□□ 0.58
ACTB-205ENST00000432588 REV3LO60673 3130 aa18.65■□□□□ 0.58
ACTB-205ENST00000432588 ARHGEF15O94989 841 aa18.64■□□□□ 0.57
ACTB-205ENST00000432588 LIFRP42702 1097 aa18.64■□□□□ 0.57
ACTB-205ENST00000432588 HIC1Q14526 733 aa18.64■□□□□ 0.57
ACTB-205ENST00000432588 MBTPS1Q14703 1052 aa18.64■□□□□ 0.57
ACTB-205ENST00000432588 TRAF7Q6Q0C0 670 aa18.64■□□□□ 0.57
ACTB-205ENST00000432588 USP17L6PQ6QN14 398 aa18.64■□□□□ 0.57
ACTB-205ENST00000432588 TMCO2Q7Z6W1 182 aaPredicted RBP18.64■□□□□ 0.57
ACTB-205ENST00000432588 NLRX1Q86UT6 975 aa18.64■□□□□ 0.57
ACTB-205ENST00000432588 GIMAP8Q8ND71 665 aaPredicted RBP18.64■□□□□ 0.57
ACTB-205ENST00000432588 SENP7Q9BQF6 1050 aa18.64■□□□□ 0.57
ACTB-205ENST00000432588 LSG1Q9H089 658 aaKnown RBP18.64■□□□□ 0.57
ACTB-205ENST00000432588 BDP1A6H8Y1 2624 aa18.64■□□□□ 0.57
ACTB-205ENST00000432588 PRRC2BQ5JSZ5 2229 aaKnown RBP18.64■□□□□ 0.57
ACTB-205ENST00000432588 LCHNA4D1U4 455 aa18.63■□□□□ 0.57
ACTB-205ENST00000432588 SH2B2O14492 632 aaPredicted RBP18.63■□□□□ 0.57
ACTB-205ENST00000432588 CAND2O75155 1236 aa18.63■□□□□ 0.57
ACTB-205ENST00000432588 HOXC8P31273 242 aa18.63■□□□□ 0.57
ACTB-205ENST00000432588 GRB10Q13322 594 aa18.63■□□□□ 0.57
ACTB-205ENST00000432588 CDHR1Q96JP9 859 aa18.63■□□□□ 0.57
ACTB-205ENST00000432588 GPR20Q99678 358 aa18.63■□□□□ 0.57
ACTB-205ENST00000432588 ESYT1Q9BSJ8 1104 aa18.63■□□□□ 0.57
ACTB-205ENST00000432588 RNPEPQ9H4A4 650 aa18.63■□□□□ 0.57
ACTB-205ENST00000432588 BCAS3Q9H6U6 928 aa18.63■□□□□ 0.57
ACTB-205ENST00000432588 PSTPIP2Q9H939 334 aa18.63■□□□□ 0.57
ACTB-205ENST00000432588 SLC12A7Q9Y666 1083 aa18.63■□□□□ 0.57
ACTB-205ENST00000432588 NCOR1O75376 2440 aa18.62■□□□□ 0.57
ACTB-205ENST00000432588 MEIS2O14770 477 aa18.62■□□□□ 0.57
ACTB-205ENST00000432588 SLC27A2O14975 620 aa18.62■□□□□ 0.57
ACTB-205ENST00000432588 TREHO43280 583 aa18.62■□□□□ 0.57
ACTB-205ENST00000432588 PLEKHA8P1O95397 391 aa18.62■□□□□ 0.57
ACTB-205ENST00000432588 AMHP03971 560 aa18.62■□□□□ 0.57
ACTB-205ENST00000432588 SEMA3FQ13275 785 aa18.62■□□□□ 0.57
ACTB-205ENST00000432588 TCTN1Q2MV58 587 aa18.62■□□□□ 0.57
ACTB-205ENST00000432588 SRBD1Q8N5C6 995 aaKnown RBP18.62■□□□□ 0.57
ACTB-205ENST00000432588 ANO2Q9NQ90 1003 aa18.62■□□□□ 0.57
ACTB-205ENST00000432588 COG5Q9UP83 839 aa18.62■□□□□ 0.57
ACTB-205ENST00000432588 INSL6Q9Y581 213 aa18.62■□□□□ 0.57
ACTB-205ENST00000432588 SP4Q02446 784 aa18.61■□□□□ 0.57
ACTB-205ENST00000432588 TFF2Q03403 129 aa18.61■□□□□ 0.57
ACTB-205ENST00000432588 PLEKHG4Q58EX7 1191 aa18.61■□□□□ 0.57
ACTB-205ENST00000432588 UTP14CQ5TAP6 766 aaKnown RBP18.61■□□□□ 0.57
ACTB-205ENST00000432588 CREB3L3Q68CJ9 461 aa18.61■□□□□ 0.57
ACTB-205ENST00000432588 FAM117BQ6P1L5 589 aa18.61■□□□□ 0.57
ACTB-205ENST00000432588 DBF4BQ8NFT6 615 aa18.61■□□□□ 0.57
ACTB-205ENST00000432588 SEPT8Q92599 483 aa18.61■□□□□ 0.57
ACTB-205ENST00000432588 TGS1Q96RS0 853 aaKnown RBP18.61■□□□□ 0.57
ACTB-205ENST00000432588 SETD4Q9NVD3 440 aa18.61■□□□□ 0.57
ACTB-205ENST00000432588 LMCD1Q9NZU5 365 aa18.61■□□□□ 0.57
ACTB-205ENST00000432588 RXRAP19793 462 aa18.6■□□□□ 0.57
ACTB-205ENST00000432588 ERVK-21P61565 698 aa18.6■□□□□ 0.57
ACTB-205ENST00000432588 NECTIN1Q15223 517 aa18.6■□□□□ 0.57
ACTB-205ENST00000432588 RNF20Q5VTR2 975 aa18.6■□□□□ 0.57
ACTB-205ENST00000432588 KRT40Q6A162 431 aa18.6■□□□□ 0.57
ACTB-205ENST00000432588 SYNE3Q6ZMZ3 975 aa18.6■□□□□ 0.57
ACTB-205ENST00000432588 TRIM50Q86XT4 487 aa18.6■□□□□ 0.57
ACTB-205ENST00000432588 MYOCDQ8IZQ8 938 aa18.6■□□□□ 0.57
ACTB-205ENST00000432588 CMTR1Q8N1G2 835 aaKnown RBP18.6■□□□□ 0.57
ACTB-205ENST00000432588 GPRASP2Q96D09 838 aa18.6■□□□□ 0.57
ACTB-205ENST00000432588 MTUS1Q9ULD2 1270 aa18.6■□□□□ 0.57
ACTB-205ENST00000432588 PTPRSQ13332 1948 aa18.6■□□□□ 0.57
ACTB-205ENST00000432588 NRCAMQ92823 1304 aa18.59■□□□□ 0.57
ACTB-205ENST00000432588 LINC01553A4QN01 128 aa18.59■□□□□ 0.57
ACTB-205ENST00000432588 SPDYE3A6NKU9 549 aa18.59■□□□□ 0.57
ACTB-205ENST00000432588 LPXNO60711 386 aa18.59■□□□□ 0.57
ACTB-205ENST00000432588 CTSHP09668 335 aa18.59■□□□□ 0.57
ACTB-205ENST00000432588 BMP1P13497 986 aa18.59■□□□□ 0.57
ACTB-205ENST00000432588 ARHGAP4P98171 946 aa18.59■□□□□ 0.57
ACTB-205ENST00000432588 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.59■□□□□ 0.572e-30■■■□□ 14.8
ACTB-205ENST00000432588 SPRED2Q7Z698 418 aa18.59■□□□□ 0.57
ACTB-205ENST00000432588 CCDC82Q8N4S0 544 aa18.59■□□□□ 0.57
ACTB-205ENST00000432588 FANCBQ8NB91 859 aa18.59■□□□□ 0.57
ACTB-205ENST00000432588 GDPD5Q8WTR4 605 aa18.59■□□□□ 0.57
ACTB-205ENST00000432588 HLA-CQ95604 372 aa18.59■□□□□ 0.57
ACTB-205ENST00000432588 EHMT1Q9H9B1 1298 aa18.59■□□□□ 0.57
ACTB-205ENST00000432588 TCF7P36402 384 aaPredicted RBP18.58■□□□□ 0.56
ACTB-205ENST00000432588 TMTC3Q6ZXV5 915 aa18.58■□□□□ 0.56
ACTB-205ENST00000432588 HEATR3Q7Z4Q2 680 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms