RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 CCNT1O60563 726 aaKnown RBP20.9■□□□□ 0.94
RFTN1-202ENST00000431547 KPNA6O60684 536 aa20.9■□□□□ 0.94
RFTN1-202ENST00000431547 ASGR1P07306 291 aa20.9■□□□□ 0.94
RFTN1-202ENST00000431547 PDIA4P13667 645 aaKnown RBP20.9■□□□□ 0.94
RFTN1-202ENST00000431547 TRAPPC10P48553 1259 aa20.9■□□□□ 0.94
RFTN1-202ENST00000431547 ACLYP53396 1101 aa20.9■□□□□ 0.94
RFTN1-202ENST00000431547 ITGB3BPQ13352 177 aaPredicted RBP20.9■□□□□ 0.94
RFTN1-202ENST00000431547 HSDL1Q3SXM5 330 aa20.9■□□□□ 0.94
RFTN1-202ENST00000431547 NECAB2Q7Z6G3 386 aa20.9■□□□□ 0.94
RFTN1-202ENST00000431547 DIS3LQ8TF46 1054 aaKnown RBP20.9■□□□□ 0.94
RFTN1-202ENST00000431547 SDF4Q9BRK5 362 aa20.9■□□□□ 0.94
RFTN1-202ENST00000431547 ZNF577Q9BSK1 485 aa20.9■□□□□ 0.94
RFTN1-202ENST00000431547 TBC1D22BQ9NU19 505 aa20.9■□□□□ 0.94
RFTN1-202ENST00000431547 PKD2L1Q9P0L9 805 aa20.9■□□□□ 0.94
RFTN1-202ENST00000431547 MSH4O15457 936 aa20.89■□□□□ 0.93
RFTN1-202ENST00000431547 DHX15O43143 795 aaKnown RBP20.89■□□□□ 0.93
RFTN1-202ENST00000431547 PPFIA4O75335 1185 aa20.89■□□□□ 0.93
RFTN1-202ENST00000431547 MMP3P08254 477 aa20.89■□□□□ 0.93
RFTN1-202ENST00000431547 HOXD8P13378 290 aaPredicted RBP20.89■□□□□ 0.93
RFTN1-202ENST00000431547 POLR3EQ9NVU0 708 aa20.89■□□□□ 0.93
RFTN1-202ENST00000431547 VPS37CA5D8V6 355 aaPredicted RBP20.88■□□□□ 0.93
RFTN1-202ENST00000431547 SLC37A4O43826 429 aa20.88■□□□□ 0.93
RFTN1-202ENST00000431547 SORBS3O60504 671 aa20.88■□□□□ 0.93
RFTN1-202ENST00000431547 CABYRO75952 493 aa20.88■□□□□ 0.93
RFTN1-202ENST00000431547 DGKDQ16760 1214 aa20.88■□□□□ 0.93
RFTN1-202ENST00000431547 SPRYD3Q8NCJ5 442 aa20.88■□□□□ 0.93
RFTN1-202ENST00000431547 SLC5A5Q92911 643 aa20.88■□□□□ 0.93
RFTN1-202ENST00000431547 RIT2Q99578 217 aa20.88■□□□□ 0.93
RFTN1-202ENST00000431547 C11orf49Q9H6J7 331 aa20.88■□□□□ 0.93
RFTN1-202ENST00000431547 JPH1Q9HDC5 661 aaPredicted RBP20.88■□□□□ 0.93
RFTN1-202ENST00000431547 SLC9A2Q9UBY0 812 aa20.88■□□□□ 0.93
RFTN1-202ENST00000431547 NOL7Q9UMY1 257 aaKnown RBP20.88■□□□□ 0.93
RFTN1-202ENST00000431547 KIAA1217Q5T5P2 1943 aa20.88■□□□□ 0.93
RFTN1-202ENST00000431547 NOP56O00567 594 aaKnown RBP20.87■□□□□ 0.93
RFTN1-202ENST00000431547 TBX3O15119 743 aa20.87■□□□□ 0.93
RFTN1-202ENST00000431547 STX6O43752 255 aa20.87■□□□□ 0.93
RFTN1-202ENST00000431547 CAPN15O75808 1086 aa20.87■□□□□ 0.93
RFTN1-202ENST00000431547 RGS19P49795 217 aa20.87■□□□□ 0.93
RFTN1-202ENST00000431547 PURAQ00577 322 aaKnown RBP20.87■□□□□ 0.93
RFTN1-202ENST00000431547 ORC2Q13416 577 aaPredicted RBP20.87■□□□□ 0.93
RFTN1-202ENST00000431547 ETNPPLQ8TBG4 499 aa20.87■□□□□ 0.93
RFTN1-202ENST00000431547 FAM20AQ96MK3 541 aa20.87■□□□□ 0.93
RFTN1-202ENST00000431547 GPR20Q99678 358 aa20.87■□□□□ 0.93
RFTN1-202ENST00000431547 SENP6Q9GZR1 1112 aaPredicted RBP20.87■□□□□ 0.93
RFTN1-202ENST00000431547 KCNMB3Q9NPA1 279 aa20.87■□□□□ 0.93
RFTN1-202ENST00000431547 MTMR6Q9Y217 621 aa20.87■□□□□ 0.93
RFTN1-202ENST00000431547 ELP1O95163 1332 aa20.86■□□□□ 0.93
RFTN1-202ENST00000431547 A0A1W2PQ45 241 aaPredicted RBP20.86■□□□□ 0.93
RFTN1-202ENST00000431547 A0A1W2PQY0 241 aa20.86■□□□□ 0.93
RFTN1-202ENST00000431547 WNT7AO00755 349 aa20.86■□□□□ 0.93
RFTN1-202ENST00000431547 MYL3P08590 195 aa20.86■□□□□ 0.93
RFTN1-202ENST00000431547 ATP2B1P20020 1258 aa20.86■□□□□ 0.93
RFTN1-202ENST00000431547 TOB1P50616 345 aaPredicted RBP20.86■□□□□ 0.93
RFTN1-202ENST00000431547 CXCL17Q6UXB2 119 aa20.86■□□□□ 0.93
RFTN1-202ENST00000431547 BRAPQ7Z569 592 aa20.86■□□□□ 0.93
RFTN1-202ENST00000431547 SEPT1Q8WYJ6 367 aa20.86■□□□□ 0.93
RFTN1-202ENST00000431547 FERMT2Q96AC1 680 aa20.86■□□□□ 0.93
RFTN1-202ENST00000431547 GLT1D1Q96MS3 346 aa20.86■□□□□ 0.93
RFTN1-202ENST00000431547 PSMD10O75832 226 aa20.85■□□□□ 0.93
RFTN1-202ENST00000431547 RILPL1Q5EBL4 403 aa20.85■□□□□ 0.93
RFTN1-202ENST00000431547 TTC38Q5R3I4 469 aa20.85■□□□□ 0.93
RFTN1-202ENST00000431547 UIMC1Q96RL1 719 aa20.85■□□□□ 0.93
RFTN1-202ENST00000431547 MTG1Q9BT17 334 aaPredicted RBP20.85■□□□□ 0.93
RFTN1-202ENST00000431547 TELO2Q9Y4R8 837 aa20.85■□□□□ 0.93
RFTN1-202ENST00000431547 KIAA0100Q14667 2235 aaKnown RBP20.84■□□□□ 0.93
RFTN1-202ENST00000431547 FRMPD3Q5JV73 1810 aa20.84■□□□□ 0.93
RFTN1-202ENST00000431547 GSTTP1A0A1W2PQM5 241 aa20.84■□□□□ 0.93
RFTN1-202ENST00000431547 GAS7O60861 476 aa20.84■□□□□ 0.93
RFTN1-202ENST00000431547 ATG7O95352 703 aa20.84■□□□□ 0.93
RFTN1-202ENST00000431547 CCNE2O96020 404 aa20.84■□□□□ 0.93
RFTN1-202ENST00000431547 MCM7P33993 719 aa20.84■□□□□ 0.93
RFTN1-202ENST00000431547 ACTR2P61160 394 aa20.84■□□□□ 0.93
RFTN1-202ENST00000431547 SP4Q02446 784 aa20.84■□□□□ 0.93
RFTN1-202ENST00000431547 LRCH2Q5VUJ6 765 aa20.84■□□□□ 0.93
RFTN1-202ENST00000431547 ZNF746Q6NUN9 644 aaPredicted RBP20.84■□□□□ 0.93
RFTN1-202ENST00000431547 POTEDQ86YR6 584 aa20.84■□□□□ 0.93
RFTN1-202ENST00000431547 HAS1Q92839 578 aa20.84■□□□□ 0.93
RFTN1-202ENST00000431547 STARD7Q9NQZ5 370 aa20.84■□□□□ 0.93
RFTN1-202ENST00000431547 MYH7BA7E2Y1 1941 aa20.83■□□□□ 0.93
RFTN1-202ENST00000431547 DDX39AO00148 427 aaKnown RBP20.83■□□□□ 0.93
RFTN1-202ENST00000431547 NEMFO60524 1076 aa20.83■□□□□ 0.93
RFTN1-202ENST00000431547 BAG4O95429 457 aaKnown RBP20.83■□□□□ 0.93
RFTN1-202ENST00000431547 KRT76Q01546 638 aa20.83■□□□□ 0.93
RFTN1-202ENST00000431547 ZNF174Q15697 407 aa20.83■□□□□ 0.93
RFTN1-202ENST00000431547 SLC39A5Q6ZMH5 540 aa20.83■□□□□ 0.93
RFTN1-202ENST00000431547 FERMT3Q86UX7 667 aa20.83■□□□□ 0.93
RFTN1-202ENST00000431547 SLFN12Q8IYM2 578 aa20.83■□□□□ 0.93
RFTN1-202ENST00000431547 GJA10Q969M2 543 aa20.83■□□□□ 0.93
RFTN1-202ENST00000431547 VTI1AQ96AJ9 217 aa20.83■□□□□ 0.93
RFTN1-202ENST00000431547 MTMR9Q96QG7 549 aa20.83■□□□□ 0.93
RFTN1-202ENST00000431547 C16orf70Q9BSU1 422 aa20.83■□□□□ 0.93
RFTN1-202ENST00000431547 TEKT3Q9BXF9 490 aa20.83■□□□□ 0.93
RFTN1-202ENST00000431547 BRCA2P51587 3418 aa20.82■□□□□ 0.92
RFTN1-202ENST00000431547 MARCH6O60337 910 aa20.82■□□□□ 0.92
RFTN1-202ENST00000431547 TCF7P36402 384 aaPredicted RBP20.82■□□□□ 0.92
RFTN1-202ENST00000431547 RESTQ13127 1097 aa20.82■□□□□ 0.92
RFTN1-202ENST00000431547 CALCRLQ16602 461 aa20.82■□□□□ 0.92
RFTN1-202ENST00000431547 C1orf53Q5VUE5 145 aa20.82■□□□□ 0.92
RFTN1-202ENST00000431547 B3GNT9Q6UX72 402 aa20.82■□□□□ 0.92
RFTN1-202ENST00000431547 ABHD15Q6UXT9 468 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms