RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 SMAD2Q15796 467 aaKnown RBP4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 ATP13A4Q4VNC1 1196 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 GALNT18Q6P9A2 607 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 SLC23A3Q6PIS1 610 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 ARHGAP36Q6ZRI8 547 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 NLRX1Q86UT6 975 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 C2orf69Q8N8R5 385 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 PIP4K2CQ8TBX8 421 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 RELTQ969Z4 430 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 CHMP4CQ96CF2 233 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 TRMT2BQ96GJ1 504 aaKnown RBP4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 SCYL1Q96KG9 808 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 C8orf48Q96LL4 319 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 GPR101Q96P66 508 aaPredicted RBP4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 SLC13A1Q9BZW2 595 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 PDLIM7Q9NR12 457 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 CATSPERZQ9NTU4 200 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 SLAMF8Q9P0V8 285 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 RWDD3Q9Y3V2 267 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 TELO2Q9Y4R8 837 aa4.31□□□□□ -1.72
HMGB1P27-201ENST00000431429 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 FITM1A5D6W6 292 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 SRGAP3O43295 1099 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 AKAP10O43572 662 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 TSPAN6O43657 245 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 FUCA1P04066 466 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 GNAT1P11488 350 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 SDHAP31040 664 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 GRIK1P39086 918 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 KPNA1P52294 538 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 IRF9Q00978 393 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 MOGSQ13724 837 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 TIGD5Q53EQ6 642 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 CC2D1AQ6P1N0 951 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 CEP128Q6ZU80 1094 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 PTRH1Q86Y79 214 aaKnown RBP4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 FMNL3Q8IVF7 1028 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 LZTR1Q8N653 840 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 NETO2Q8NC67 525 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 SLC5A5Q92911 643 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 MTMR8Q96EF0 704 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 ORAI2Q96SN7 254 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 KCNJ15Q99712 375 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 RTFDC1Q9BY42 306 aaPredicted RBP4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 CDH19Q9H159 772 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 ZMAT4Q9H898 229 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 TCF7L1Q9HCS4 588 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 TNFRSF12AQ9NP84 129 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 ZNF652Q9Y2D9 606 aa4.3□□□□□ -1.72
HMGB1P27-201ENST00000431429 E2F8A0AVK6 867 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 SHTN1A0MZ66 631 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 TRIM75PA6NK02 468 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 ADAMTS4O75173 837 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 DGKIO75912 1065 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 FURINP09958 794 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 COL6A2P12110 1019 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 GDNFP39905 211 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 RAB27AP51159 221 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 ITKQ08881 620 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 PIN1Q13526 163 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 LRRC32Q14392 662 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 SART3Q15020 963 aaKnown RBP4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 ESRP1Q6NXG1 681 aaKnown RBP4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 SPPL2CQ8IUH8 684 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 KIAA1958Q8N8K9 716 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 ZNF610Q8N9Z0 462 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 TTLL11Q8NHH1 800 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 PHOSPHO1Q8TCT1 267 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 CCDC120Q96HB5 630 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 CHAMP1Q96JM3 812 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 C16orf92Q96LL3 132 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 ELF4Q99607 663 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 SEMA6BQ9H3T3 888 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 SMOC1Q9H4F8 434 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 ASH2LQ9UBL3 628 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 ADAMTS6Q9UKP5 1117 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 DSEQ9UL01 958 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 COA3Q9Y2R0 106 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 TAF6LQ9Y6J9 622 aa4.29□□□□□ -1.72
HMGB1P27-201ENST00000431429 FAM90A27PA6NNH2 459 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 H7C1D1 291 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 SGSM2O43147 1006 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 PSPNO60542 156 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 RFPL1O75677 317 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 SCGB1D2O95969 90 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 C4BPAP04003 597 aaKnown RBP4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 NTRK1P04629 796 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 FNTBP49356 437 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 KLF1Q13351 362 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 SNX17Q15036 470 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 LRRC41Q15345 812 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 DDB1Q16531 1140 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 HSP90AB2PQ58FF8 381 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 TMEM240Q5SV17 173 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 BROXQ5VW32 411 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 IQSEC1Q6DN90 963 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 KCTD1Q719H9 257 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 C11orf74Q86VG3 221 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 RASSF3Q86WH2 238 aa4.28□□□□□ -1.72
HMGB1P27-201ENST00000431429 NLGN4XQ8N0W4 816 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms