RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 C22orf23Q9BZE7 217 aa17.43■□□□□ 0.38
PTCD1-204ENST00000430982 WNT8AQ9H1J5 351 aa17.43■□□□□ 0.38
PTCD1-204ENST00000430982 EPHX3Q9H6B9 360 aa17.43■□□□□ 0.38
PTCD1-204ENST00000430982 MRVI1Q9Y6F6 885 aa17.43■□□□□ 0.38
PTCD1-204ENST00000430982 SPDYE3A6NKU9 549 aa17.42■□□□□ 0.38
PTCD1-204ENST00000430982 RABGGTBP53611 331 aa17.42■□□□□ 0.38
PTCD1-204ENST00000430982 SSRP1Q08945 709 aaKnown RBP17.42■□□□□ 0.38
PTCD1-204ENST00000430982 PKN1Q16512 942 aa17.42■□□□□ 0.38
PTCD1-204ENST00000430982 LY6KQ17RY6 165 aa17.42■□□□□ 0.38
PTCD1-204ENST00000430982 PPP2R2DQ66LE6 453 aa17.42■□□□□ 0.38
PTCD1-204ENST00000430982 OTOP2Q7RTS6 562 aa17.42■□□□□ 0.38
PTCD1-204ENST00000430982 RIC8AQ9NPQ8 531 aa17.42■□□□□ 0.38
PTCD1-204ENST00000430982 C11orf16Q9NQ32 467 aa17.42■□□□□ 0.38
PTCD1-204ENST00000430982 HCN4Q9Y3Q4 1203 aa17.42■□□□□ 0.38
PTCD1-204ENST00000430982 MTCH2Q9Y6C9 303 aa17.42■□□□□ 0.38
PTCD1-204ENST00000430982 GRIN2DO15399 1336 aa17.42■□□□□ 0.38
PTCD1-204ENST00000430982 FRMPD4Q14CM0 1322 aa17.42■□□□□ 0.38
PTCD1-204ENST00000430982 SCRN1Q12765 414 aa17.41■□□□□ 0.38
PTCD1-204ENST00000430982 CCDC62Q6P9F0 684 aa17.41■□□□□ 0.38
PTCD1-204ENST00000430982 CCDC12Q8WUD4 166 aaPredicted RBP17.41■□□□□ 0.38
PTCD1-204ENST00000430982 SEZ6LQ9BYH1 1024 aa17.41■□□□□ 0.38
PTCD1-204ENST00000430982 EHMT1Q9H9B1 1298 aa17.41■□□□□ 0.38
PTCD1-204ENST00000430982 UPF2Q9HAU5 1272 aaKnown RBP17.41■□□□□ 0.38
PTCD1-204ENST00000430982 RTEL1Q9NZ71 1219 aa17.41■□□□□ 0.38
PTCD1-204ENST00000430982 PCDHA6Q9UN73 950 aa17.41■□□□□ 0.38
PTCD1-204ENST00000430982 PCDHA8Q9Y5H6 950 aa17.41■□□□□ 0.38
PTCD1-204ENST00000430982 TLL1O43897 1013 aa17.4■□□□□ 0.38
PTCD1-204ENST00000430982 PFKFB2O60825 505 aa17.4■□□□□ 0.38
PTCD1-204ENST00000430982 CABYRO75952 493 aa17.4■□□□□ 0.38
PTCD1-204ENST00000430982 RGS20O76081 388 aa17.4■□□□□ 0.38
PTCD1-204ENST00000430982 GH1P01241 217 aa17.4■□□□□ 0.38
PTCD1-204ENST00000430982 MYL3P08590 195 aa17.4■□□□□ 0.38
PTCD1-204ENST00000430982 MYOGP15173 224 aa17.4■□□□□ 0.38
PTCD1-204ENST00000430982 CPT1AP50416 773 aa17.4■□□□□ 0.38
PTCD1-204ENST00000430982 BRDTQ58F21 947 aaPredicted RBP17.4■□□□□ 0.38
PTCD1-204ENST00000430982 CXCL17Q6UXB2 119 aa17.4■□□□□ 0.38
PTCD1-204ENST00000430982 PGBD1Q96JS3 809 aa17.4■□□□□ 0.38
PTCD1-204ENST00000430982 GLT8D2Q9H1C3 349 aa17.4■□□□□ 0.38
PTCD1-204ENST00000430982 DDX41Q9UJV9 622 aaKnown RBP17.4■□□□□ 0.38
PTCD1-204ENST00000430982 SLC4A7Q9Y6M7 1214 aa17.4■□□□□ 0.38
PTCD1-204ENST00000430982 SORBS3O60504 671 aa17.39■□□□□ 0.37
PTCD1-204ENST00000430982 B4GALT4O60513 344 aa17.39■□□□□ 0.37
PTCD1-204ENST00000430982 GPR37L1O60883 481 aa17.39■□□□□ 0.37
PTCD1-204ENST00000430982 CDKL5O76039 1030 aa17.39■□□□□ 0.37
PTCD1-204ENST00000430982 MRPS9P82933 396 aaKnown RBP17.39■□□□□ 0.37
PTCD1-204ENST00000430982 GNPTABQ3T906 1256 aa17.39■□□□□ 0.37
PTCD1-204ENST00000430982 PCNX4Q63HM2 1172 aa17.39■□□□□ 0.37
PTCD1-204ENST00000430982 XRRA1Q6P2D8 792 aa17.39■□□□□ 0.37
PTCD1-204ENST00000430982 NECAB1Q8N987 351 aa17.39■□□□□ 0.37
PTCD1-204ENST00000430982 C6orf50Q9HD87 102 aa17.39■□□□□ 0.37
PTCD1-204ENST00000430982 TMEM260Q9NX78 707 aa17.39■□□□□ 0.37
PTCD1-204ENST00000430982 VPS54Q9P1Q0 977 aa17.39■□□□□ 0.37
PTCD1-204ENST00000430982 COG5Q9UP83 839 aa17.39■□□□□ 0.37
PTCD1-204ENST00000430982 MUC6Q6W4X9 2439 aa17.39■□□□□ 0.37
PTCD1-204ENST00000430982 ESYT2A0FGR8 921 aa17.38■□□□□ 0.37
PTCD1-204ENST00000430982 STAM2O75886 525 aa17.38■□□□□ 0.37
PTCD1-204ENST00000430982 DEXIO95424 95 aa17.38■□□□□ 0.37
PTCD1-204ENST00000430982 FOSP01100 380 aaPredicted RBP17.38■□□□□ 0.37
PTCD1-204ENST00000430982 ATP2A2P16615 1042 aaKnown RBP17.38■□□□□ 0.37
PTCD1-204ENST00000430982 CCL23P55773 120 aa17.38■□□□□ 0.37
PTCD1-204ENST00000430982 ARHGAP1Q07960 439 aa17.38■□□□□ 0.37
PTCD1-204ENST00000430982 ITGA7Q13683 1181 aa17.38■□□□□ 0.37
PTCD1-204ENST00000430982 ME3Q16798 604 aa17.38■□□□□ 0.37
PTCD1-204ENST00000430982 TMEM31Q5JXX7 168 aa17.38■□□□□ 0.37
PTCD1-204ENST00000430982 JAKMIP3Q5VZ66 844 aa17.38■□□□□ 0.37
PTCD1-204ENST00000430982 KCNV1Q6PIU1 500 aa17.38■□□□□ 0.37
PTCD1-204ENST00000430982 TEX2Q8IWB9 1127 aa17.38■□□□□ 0.37
PTCD1-204ENST00000430982 MICALL1Q8N3F8 863 aa17.38■□□□□ 0.37
PTCD1-204ENST00000430982 CCDC148Q8NFR7 591 aa17.38■□□□□ 0.37
PTCD1-204ENST00000430982 AFG1LQ8WV93 481 aa17.38■□□□□ 0.37
PTCD1-204ENST00000430982 ANO3Q9BYT9 981 aa17.38■□□□□ 0.37
PTCD1-204ENST00000430982 POLR3EQ9NVU0 708 aa17.38■□□□□ 0.37
PTCD1-204ENST00000430982 EPOPA6NHQ4 379 aa17.37■□□□□ 0.37
PTCD1-204ENST00000430982 DTNBO60941 627 aa17.37■□□□□ 0.37
PTCD1-204ENST00000430982 LARGE1O95461 756 aa17.37■□□□□ 0.37
PTCD1-204ENST00000430982 GGPS1O95749 300 aa17.37■□□□□ 0.37
PTCD1-204ENST00000430982 PFKMP08237 780 aa17.37■□□□□ 0.37
PTCD1-204ENST00000430982 GNA11P29992 359 aa17.37■□□□□ 0.37
PTCD1-204ENST00000430982 RBM25P49756 843 aaKnown RBP17.37■□□□□ 0.37
PTCD1-204ENST00000430982 NLRP5P59047 1200 aa17.37■□□□□ 0.37
PTCD1-204ENST00000430982 AP3B2Q13367 1082 aa17.37■□□□□ 0.37
PTCD1-204ENST00000430982 NLRX1Q86UT6 975 aa17.37■□□□□ 0.37
PTCD1-204ENST00000430982 DHX37Q8IY37 1157 aaKnown RBP17.37■□□□□ 0.37
PTCD1-204ENST00000430982 RPUSD2Q8IZ73 545 aaKnown RBP17.37■□□□□ 0.37
PTCD1-204ENST00000430982 KHSRPQ92945 711 aaKnown RBP eCLIP17.37■□□□□ 0.377e-7■■□□□ 12.3
PTCD1-204ENST00000430982 INPP4AQ96PE3 977 aaPredicted RBP17.37■□□□□ 0.37
PTCD1-204ENST00000430982 KIF2CQ99661 725 aa17.37■□□□□ 0.37
PTCD1-204ENST00000430982 ZMYND12Q9H0C1 365 aa17.37■□□□□ 0.37
PTCD1-204ENST00000430982 TRPV6Q9H1D0 765 aa17.37■□□□□ 0.37
PTCD1-204ENST00000430982 A6NJR5 290 aa17.36■□□□□ 0.37
PTCD1-204ENST00000430982 FIBPO43427 364 aa17.36■□□□□ 0.37
PTCD1-204ENST00000430982 CA3P07451 260 aa17.36■□□□□ 0.37
PTCD1-204ENST00000430982 TGFB3P10600 412 aa17.36■□□□□ 0.37
PTCD1-204ENST00000430982 UBA1P22314 1058 aaKnown RBP17.36■□□□□ 0.37
PTCD1-204ENST00000430982 CLK2P49760 499 aaKnown RBP17.36■□□□□ 0.37
PTCD1-204ENST00000430982 PSMC6P62333 389 aa17.36■□□□□ 0.37
PTCD1-204ENST00000430982 SP2Q02086 613 aa17.36■□□□□ 0.37
PTCD1-204ENST00000430982 LAMC2Q13753 1193 aa17.36■□□□□ 0.37
PTCD1-204ENST00000430982 REXO1Q8N1G1 1221 aaKnown RBP17.36■□□□□ 0.37
PTCD1-204ENST00000430982 GTF3C6Q969F1 213 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms