RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 WDR19Q8NEZ3 1342 aa8.15□□□□□ -1.1
SYNPO2-202ENST00000429713 A0A0D9SFI3 127 aa8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 RNMTO43148 476 aaKnown RBP8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 C16orf87Q6PH81 154 aa8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 SH3TC2Q8TF17 1288 aa8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 POP5Q969H6 163 aaKnown RBP8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 CD2APQ9Y5K6 639 aa8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 IQSEC2Q5JU85 1478 aa8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 MAP2K7O14733 419 aa8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 TOGARAM2Q6ZUX3 1019 aa8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 PHACTR1Q9C0D0 580 aa8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 PARP1P09874 1014 aaKnown RBP8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 PAX7P23759 505 aa8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 RBM5P52756 815 aaKnown RBP eCLIP8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 SELENOSQ9BQE4 189 aa8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 DDX21Q9NR30 783 aaKnown RBP eCLIP8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 AIPL1Q9NZN9 384 aa8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 RCOR1Q9UKL0 485 aa8.15□□□□□ -1.11
SYNPO2-202ENST00000429713 ASAP2O43150 1006 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 RPS6KA1Q15418 735 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 SGSM1Q2NKQ1 1148 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 LRRC8BQ6P9F7 803 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 CLMNQ96JQ2 1002 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 SPAG17Q6Q759 2223 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 SPAG7O75391 227 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 PHEXP78562 749 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 PAK1Q13153 545 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 LRRC49Q8IUZ0 686 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 MMADHCQ9H3L0 296 aaPredicted RBP8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 C8orf4Q9NR00 106 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 GOLGA8CPA6NN73 597 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 PGRMC1O00264 195 aaKnown RBP8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 KRT81Q14533 505 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 ADCK5Q3MIX3 580 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 CNNM4Q6P4Q7 775 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 EZH1Q92800 747 aaPredicted RBP8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 PAGR1Q9BTK6 254 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 VAT1LQ9HCJ6 419 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 TACC3Q9Y6A5 838 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 EPN1Q9Y6I3 576 aaPredicted RBP8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 NDUFB9Q9Y6M9 179 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 AATKQ6ZMQ8 1374 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 GPAA1O43292 621 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 TIMM10P62072 90 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 PRR23BQ6ZRT6 265 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 CENPTQ96BT3 561 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 CCDC124Q96CT7 223 aaKnown RBP8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 NAF1Q96HR8 494 aaKnown RBP8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 TTC25Q96NG3 672 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 ALKQ9UM73 1620 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 ITIH6Q6UXX5 1313 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 MAGEB6P1A0A0J9YX57 407 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 KRT38O76015 456 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 KRT13P13646 458 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 BNC1Q01954 994 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 STK4Q13043 487 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 CMPK2Q5EBM0 449 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 ZSCAN29Q8IWY8 852 aaPredicted RBP8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 HPCAL4Q9UM19 191 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 ADGRA3Q8IWK6 1321 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 B4E1Z4 1266 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 BEND6Q5SZJ8 279 aaPredicted RBP8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 ZKSCAN3Q9BRR0 538 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 HOMER2Q9NSB8 354 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 SAP30BPQ9UHR5 308 aaKnown RBP8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 NRKQ7Z2Y5 1582 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 ABCC3O15438 1527 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 PRLRP16471 622 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 CYP7A1P22680 504 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 RCAN1P53805 252 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 NAA35Q5VZE5 725 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 ZNF790Q6PG37 636 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 WDR60Q8WVS4 1066 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 GLT8D2Q9H1C3 349 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 NOD2Q9HC29 1040 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 TRPC6Q9Y210 931 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 XRCC4Q13426 336 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 WLSQ5T9L3 541 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 CTAGE3PQ8IX95 158 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 SPDYE1Q8NFV5 336 aaPredicted RBP8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 APBB2Q92870 758 aa8.14□□□□□ -1.11
SYNPO2-202ENST00000429713 PSMD14O00487 310 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 SNAPC5O75971 98 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 SUZ12Q15022 739 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 MRPL46Q9H2W6 279 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 HDAC6Q9UBN7 1215 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 APOA1P02647 267 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 KRT28Q7Z3Y7 464 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 HDDC2Q7Z4H3 204 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 SYCP3Q8IZU3 236 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 USP28Q96RU2 1077 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 NOC4LQ9BVI4 516 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 IMPG2Q9BZV3 1241 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 CITO14578 2027 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 TRMT5Q32P41 509 aaKnown RBP8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 HORMAD1Q86X24 394 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 ATP8B4Q8TF62 1192 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 APPBP2Q92624 585 aa8.13□□□□□ -1.11
SYNPO2-202ENST00000429713 LRGUKQ96M69 825 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms