RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 CAP1Q01518 475 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 KIF5AQ12840 1032 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 PSMD2Q13200 908 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 CASP8Q14790 479 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 SEPT2Q15019 361 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 SPA17Q15506 151 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 LEKR1Q6ZMV7 388 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 ZNF804AQ7Z570 1209 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 NEK8Q86SG6 692 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 CCDC84Q86UT8 332 aaPredicted RBP9.67□□□□□ -0.86
GABPB1-205ENST00000429662 NIM1KQ8IY84 436 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 CCDC155Q8N6L0 562 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 GOLGA6L1Q8N7Z2 621 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 RRP36Q96EU6 259 aaKnown RBP9.67□□□□□ -0.86
GABPB1-205ENST00000429662 TRIM9Q9C026 710 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 TTYH3Q9C0H2 523 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 ABCB6Q9NP58 842 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 IL17RBQ9NRM6 502 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 HCSTQ9UBK5 93 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 SEC63Q9UGP8 760 aaKnown RBP9.67□□□□□ -0.86
GABPB1-205ENST00000429662 ADAM21Q9UKJ8 722 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 ZNRF3Q9ULT6 936 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 GUCA1BQ9UMX6 200 aa9.67□□□□□ -0.86
GABPB1-205ENST00000429662 ASTN2O75129 1339 aaPredicted RBP9.66□□□□□ -0.86
GABPB1-205ENST00000429662 FAM205AQ6ZU69 1335 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 IRS2Q9Y4H2 1338 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 KLRF2D3W0D1 207 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 SMIM22K7EJ46 135 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 PPIP5K2O43314 1243 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 USP17L8P0C7I0 530 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 MTIF2P46199 727 aaKnown RBP9.66□□□□□ -0.86
GABPB1-205ENST00000429662 AARSP49588 968 aaKnown RBP eCLIP9.66□□□□□ -0.86
GABPB1-205ENST00000429662 ZNF157P51786 506 aaPredicted RBP9.66□□□□□ -0.86
GABPB1-205ENST00000429662 VAV2P52735 878 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 NAPAP54920 295 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 HNRNPH2P55795 449 aaKnown RBP9.66□□□□□ -0.86
GABPB1-205ENST00000429662 PDE4DQ08499 809 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 INF2Q27J81 1249 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 TMEM266Q2M3C6 531 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 SV2BQ7L1I2 683 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 HEATR3Q7Z4Q2 680 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 TRIM58Q8NG06 486 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 NEDD1Q8NHV4 660 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 GPKOWQ92917 476 aaPredicted RBP eCLIP9.66□□□□□ -0.86
GABPB1-205ENST00000429662 PURBQ96QR8 312 aaKnown RBP9.66□□□□□ -0.86
GABPB1-205ENST00000429662 PNKPQ96T60 521 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 CHP1Q99653 195 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 NAP1L4Q99733 375 aaKnown RBP9.66□□□□□ -0.86
GABPB1-205ENST00000429662 DUSP9Q99956 384 aaKnown RBP9.66□□□□□ -0.86
GABPB1-205ENST00000429662 TMEM47Q9BQJ4 181 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 NOC4LQ9BVI4 516 aaKnown RBP9.66□□□□□ -0.86
GABPB1-205ENST00000429662 CFHR5Q9BXR6 569 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 NUCKS1Q9H1E3 243 aaKnown RBP9.66□□□□□ -0.86
GABPB1-205ENST00000429662 PRO3102Q9H379 93 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 ZSWIM4Q9H7M6 989 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 PLA2G2EQ9NZK7 142 aa9.66□□□□□ -0.86
GABPB1-205ENST00000429662 REXO2Q9Y3B8 237 aaKnown RBP9.66□□□□□ -0.86
GABPB1-205ENST00000429662 MYH2Q9UKX2 1941 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 FLT1P17948 1338 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 SMCO2A6NFE2 343 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 RNF225M0QZC1 329 aaPredicted RBP9.65□□□□□ -0.86
GABPB1-205ENST00000429662 GPR25O00155 361 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 TULP2O00295 520 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 PES1O00541 588 aaKnown RBP9.65□□□□□ -0.86
GABPB1-205ENST00000429662 TACC1O75410 805 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 CLSTN1O94985 981 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 RHOXF2BP0C7M4 288 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 PLCG1P19174 1290 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 ACTN2P35609 894 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 NOVP48745 357 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 HERVK_113P62684 666 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 VSNL1P62760 191 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 ASIC1P78348 528 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 LRRC63Q05C16 580 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 PDIA5Q14554 519 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 MCM6Q14566 821 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 CENPPQ6IPU0 288 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 PPP1R18Q6NYC8 613 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 WDR59Q6PJI9 974 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 C16orf86Q6ZW13 317 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 UNC13DQ70J99 1090 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 SAMD7Q7Z3H4 446 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 ZNF572Q7Z3I7 529 aaPredicted RBP9.65□□□□□ -0.86
GABPB1-205ENST00000429662 STAG2Q8N3U4 1231 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 SECISBP2LQ93073 1101 aaKnown RBP9.65□□□□□ -0.86
GABPB1-205ENST00000429662 CNOT6LQ96LI5 555 aaKnown RBP9.65□□□□□ -0.86
GABPB1-205ENST00000429662 CCDC42Q96M95 316 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 PCMTD1Q96MG8 357 aaPredicted RBP9.65□□□□□ -0.86
GABPB1-205ENST00000429662 CRAMP1Q96RY5 1269 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 TSG101Q99816 390 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 RHOXF2Q9BQY4 288 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 TMEM60Q9H2L4 133 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 NHEJ1Q9H9Q4 299 aaPredicted RBP9.65□□□□□ -0.86
GABPB1-205ENST00000429662 PDE11AQ9HCR9 933 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 RIC8AQ9NPQ8 531 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 LUC7LQ9NQ29 371 aaKnown RBP9.65□□□□□ -0.86
GABPB1-205ENST00000429662 RNF14Q9UBS8 474 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 JRKLQ9Y4A0 524 aa9.65□□□□□ -0.86
GABPB1-205ENST00000429662 TRIM49BA6NDI0 452 aa9.64□□□□□ -0.87
GABPB1-205ENST00000429662 A6NNZ2 444 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms