RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 GJC2Q5T442 439 aaPredicted RBP16.95■□□□□ 0.3
GARNL3-204ENST00000429629 C1orf53Q5VUE5 145 aa16.95■□□□□ 0.3
GARNL3-204ENST00000429629 AFG1LQ8WV93 481 aa16.95■□□□□ 0.3
GARNL3-204ENST00000429629 SEPT1Q8WYJ6 367 aa16.95■□□□□ 0.3
GARNL3-204ENST00000429629 COPS5Q92905 334 aa16.95■□□□□ 0.3
GARNL3-204ENST00000429629 SLC5A5Q92911 643 aa16.95■□□□□ 0.3
GARNL3-204ENST00000429629 LENG1Q96BZ8 264 aaPredicted RBP16.95■□□□□ 0.3
GARNL3-204ENST00000429629 SPATA33Q96N06 139 aa16.95■□□□□ 0.3
GARNL3-204ENST00000429629 ZNF577Q9BSK1 485 aa16.95■□□□□ 0.3
GARNL3-204ENST00000429629 KCNMB3Q9NPA1 279 aa16.95■□□□□ 0.3
GARNL3-204ENST00000429629 DDX25Q9UHL0 483 aaKnown RBP16.95■□□□□ 0.3
GARNL3-204ENST00000429629 KIF28PB7ZC32 967 aa16.94■□□□□ 0.3
GARNL3-204ENST00000429629 MSH4O15457 936 aa16.94■□□□□ 0.3
GARNL3-204ENST00000429629 STX6O43752 255 aa16.94■□□□□ 0.3
GARNL3-204ENST00000429629 CCNT1O60563 726 aaKnown RBP16.94■□□□□ 0.3
GARNL3-204ENST00000429629 ATG7O95352 703 aa16.94■□□□□ 0.3
GARNL3-204ENST00000429629 TDP2O95551 362 aa16.94■□□□□ 0.3
GARNL3-204ENST00000429629 ASGR1P07306 291 aa16.94■□□□□ 0.3
GARNL3-204ENST00000429629 MMP3P08254 477 aa16.94■□□□□ 0.3
GARNL3-204ENST00000429629 FOSBP53539 338 aa16.94■□□□□ 0.3
GARNL3-204ENST00000429629 ITGB3BPQ13352 177 aaPredicted RBP16.94■□□□□ 0.3
GARNL3-204ENST00000429629 HSDL1Q3SXM5 330 aa16.94■□□□□ 0.3
GARNL3-204ENST00000429629 CYFIP1Q7L576 1253 aa16.94■□□□□ 0.3
GARNL3-204ENST00000429629 ETNPPLQ8TBG4 499 aa16.94■□□□□ 0.3
GARNL3-204ENST00000429629 ZSCAN16Q9H4T2 348 aaPredicted RBP16.94■□□□□ 0.3
GARNL3-204ENST00000429629 SOX10P56693 466 aa16.93■□□□□ 0.3
GARNL3-204ENST00000429629 KRT76Q01546 638 aa16.93■□□□□ 0.3
GARNL3-204ENST00000429629 MCTP1Q6DN14 999 aa16.93■□□□□ 0.3
GARNL3-204ENST00000429629 ZNF746Q6NUN9 644 aaPredicted RBP16.93■□□□□ 0.3
GARNL3-204ENST00000429629 SLFN12Q8IYM2 578 aa16.93■□□□□ 0.3
GARNL3-204ENST00000429629 RDM1Q8NG50 284 aa16.93■□□□□ 0.3
GARNL3-204ENST00000429629 PAWRQ96IZ0 340 aaKnown RBP16.93■□□□□ 0.3
GARNL3-204ENST00000429629 GLT1D1Q96MS3 346 aa16.93■□□□□ 0.3
GARNL3-204ENST00000429629 GPR20Q99678 358 aa16.93■□□□□ 0.3
GARNL3-204ENST00000429629 MTG1Q9BT17 334 aaPredicted RBP16.93■□□□□ 0.3
GARNL3-204ENST00000429629 C11orf49Q9H6J7 331 aa16.93■□□□□ 0.3
GARNL3-204ENST00000429629 JPH1Q9HDC5 661 aaPredicted RBP16.93■□□□□ 0.3
GARNL3-204ENST00000429629 SLC9A2Q9UBY0 812 aa16.93■□□□□ 0.3
GARNL3-204ENST00000429629 MTMR6Q9Y217 621 aa16.93■□□□□ 0.3
GARNL3-204ENST00000429629 LRRC37A2A6NM11 1700 aa16.93■□□□□ 0.3
GARNL3-204ENST00000429629 MYADML2A6NDP7 307 aa16.92■□□□□ 0.3
GARNL3-204ENST00000429629 FAM205CA6NFA0 338 aa16.92■□□□□ 0.3
GARNL3-204ENST00000429629 NOP56O00567 594 aaKnown RBP16.92■□□□□ 0.3
GARNL3-204ENST00000429629 PSMD10O75832 226 aa16.92■□□□□ 0.3
GARNL3-204ENST00000429629 BAG4O95429 457 aaKnown RBP16.92■□□□□ 0.3
GARNL3-204ENST00000429629 PURAQ00577 322 aaKnown RBP16.92■□□□□ 0.3
GARNL3-204ENST00000429629 B3GNT9Q6UX72 402 aa16.92■□□□□ 0.3
GARNL3-204ENST00000429629 SMAP1Q8IYB5 467 aaPredicted RBP16.92■□□□□ 0.3
GARNL3-204ENST00000429629 MTMR9Q96QG7 549 aa16.92■□□□□ 0.3
GARNL3-204ENST00000429629 KIAA0100Q14667 2235 aaKnown RBP16.92■□□□□ 0.3
GARNL3-204ENST00000429629 IGKV6D-21A0A0A0MT36 114 aa16.91■□□□□ 0.3
GARNL3-204ENST00000429629 A0A1W2PQ45 241 aaPredicted RBP16.91■□□□□ 0.3
GARNL3-204ENST00000429629 A0A1W2PQY0 241 aa16.91■□□□□ 0.3
GARNL3-204ENST00000429629 LAD1O00515 517 aa16.91■□□□□ 0.3
GARNL3-204ENST00000429629 SLC37A4O43826 429 aa16.91■□□□□ 0.3
GARNL3-204ENST00000429629 SFNP31947 248 aa16.91■□□□□ 0.3
GARNL3-204ENST00000429629 TOB1P50616 345 aaPredicted RBP16.91■□□□□ 0.3
GARNL3-204ENST00000429629 BEX3Q00994 111 aa16.91■□□□□ 0.3
GARNL3-204ENST00000429629 SNX17Q15036 470 aa16.91■□□□□ 0.3
GARNL3-204ENST00000429629 TTC38Q5R3I4 469 aa16.91■□□□□ 0.3
GARNL3-204ENST00000429629 SLC43A3Q8NBI5 491 aa16.91■□□□□ 0.3
GARNL3-204ENST00000429629 HAS1Q92839 578 aa16.91■□□□□ 0.3
GARNL3-204ENST00000429629 KATNAL1Q9BW62 490 aa16.91■□□□□ 0.3
GARNL3-204ENST00000429629 BCAS3Q9H6U6 928 aa16.91■□□□□ 0.3
GARNL3-204ENST00000429629 FOXD4L1Q9NU39 408 aa16.91■□□□□ 0.3
GARNL3-204ENST00000429629 TCEAL9Q9UHQ7 104 aa16.91■□□□□ 0.3
GARNL3-204ENST00000429629 BRCA2P51587 3418 aa16.9■□□□□ 0.3
GARNL3-204ENST00000429629 GSTTP1A0A1W2PQM5 241 aa16.9■□□□□ 0.3
GARNL3-204ENST00000429629 VPS37CA5D8V6 355 aaPredicted RBP16.9■□□□□ 0.3
GARNL3-204ENST00000429629 NEMFO60524 1076 aa16.9■□□□□ 0.3
GARNL3-204ENST00000429629 GAS7O60861 476 aa16.9■□□□□ 0.3
GARNL3-204ENST00000429629 LGR5O75473 907 aa16.9■□□□□ 0.3
GARNL3-204ENST00000429629 BMP15O95972 392 aa16.9■□□□□ 0.3
GARNL3-204ENST00000429629 F2P00734 622 aa16.9■□□□□ 0.3
GARNL3-204ENST00000429629 SLC26A2P50443 739 aa16.9■□□□□ 0.3
GARNL3-204ENST00000429629 ACTR2P61160 394 aa16.9■□□□□ 0.3
GARNL3-204ENST00000429629 PTPN11Q06124 597 aaPredicted RBP16.9■□□□□ 0.3
GARNL3-204ENST00000429629 LRCH2Q5VUJ6 765 aa16.9■□□□□ 0.3
GARNL3-204ENST00000429629 ABHD15Q6UXT9 468 aa16.9■□□□□ 0.3
GARNL3-204ENST00000429629 C16orf70Q9BSU1 422 aa16.9■□□□□ 0.3
GARNL3-204ENST00000429629 TEKT3Q9BXF9 490 aa16.9■□□□□ 0.3
GARNL3-204ENST00000429629 SENP6Q9GZR1 1112 aaPredicted RBP16.9■□□□□ 0.3
GARNL3-204ENST00000429629 PCDHA10Q9Y5I2 948 aa16.9■□□□□ 0.3
GARNL3-204ENST00000429629 HAS3O00219 553 aa16.89■□□□□ 0.29
GARNL3-204ENST00000429629 PTGS1P23219 599 aa16.89■□□□□ 0.29
GARNL3-204ENST00000429629 ANP32AP39687 249 aaKnown RBP16.89■□□□□ 0.29
GARNL3-204ENST00000429629 CDK7P50613 346 aa16.89■□□□□ 0.29
GARNL3-204ENST00000429629 JAK3P52333 1124 aa16.89■□□□□ 0.29
GARNL3-204ENST00000429629 IRX5P78411 483 aaPredicted RBP16.89■□□□□ 0.29
GARNL3-204ENST00000429629 PPP2R5CQ13362 524 aa16.89■□□□□ 0.29
GARNL3-204ENST00000429629 NFRKBQ6P4R8 1299 aa16.89■□□□□ 0.29
GARNL3-204ENST00000429629 CXCL17Q6UXB2 119 aa16.89■□□□□ 0.29
GARNL3-204ENST00000429629 SLC39A5Q6ZMH5 540 aa16.89■□□□□ 0.29
GARNL3-204ENST00000429629 PLPPR4Q7Z2D5 763 aa16.89■□□□□ 0.29
GARNL3-204ENST00000429629 SESTD1Q86VW0 696 aa16.89■□□□□ 0.29
GARNL3-204ENST00000429629 C4orf32Q8N8J7 132 aa16.89■□□□□ 0.29
GARNL3-204ENST00000429629 AFAP1L1Q8TED9 768 aa16.89■□□□□ 0.29
GARNL3-204ENST00000429629 DIS3LQ8TF46 1054 aaKnown RBP16.89■□□□□ 0.29
GARNL3-204ENST00000429629 TNPO1Q92973 898 aaKnown RBP16.89■□□□□ 0.29
GARNL3-204ENST00000429629 TOX2Q96NM4 488 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms