RNA–Protein interactions for RNA: ENST00000428659.1

TIMM9P3-201, Transcript of TIMM9 pseudogene 3, humanhuman

BASIC

Gene TIMM9P3, Length 274 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9P3-201ENST00000428659 RSPO2Q6UXX9 243 aaPredicted RBP5.33□□□□□ -1.56
TIMM9P3-201ENST00000428659 FRMD5Q7Z6J6 570 aa5.33□□□□□ -1.56
TIMM9P3-201ENST00000428659 LRRC47Q8N1G4 583 aaKnown RBP5.33□□□□□ -1.56
TIMM9P3-201ENST00000428659 CXorf38Q8TB03 319 aa5.33□□□□□ -1.56
TIMM9P3-201ENST00000428659 ZCCHC14Q8WYQ9 949 aaKnown RBP5.33□□□□□ -1.56
TIMM9P3-201ENST00000428659 TOE1Q96GM8 510 aaKnown RBP5.33□□□□□ -1.56
TIMM9P3-201ENST00000428659 DNAJC7Q99615 494 aa5.33□□□□□ -1.56
TIMM9P3-201ENST00000428659 CD244Q9BZW8 370 aa5.33□□□□□ -1.56
TIMM9P3-201ENST00000428659 LNPKQ9C0E8 428 aa5.33□□□□□ -1.56
TIMM9P3-201ENST00000428659 SMOC1Q9H4F8 434 aa5.33□□□□□ -1.56
TIMM9P3-201ENST00000428659 SNTG2Q9NY99 539 aa5.33□□□□□ -1.56
TIMM9P3-201ENST00000428659 PPP1R1BQ9UD71 204 aaPredicted RBP5.33□□□□□ -1.56
TIMM9P3-201ENST00000428659 TRBV23-1A0A0A0MS06 115 aa5.32□□□□□ -1.56
TIMM9P3-201ENST00000428659 COL6A1P12109 1028 aa5.32□□□□□ -1.56
TIMM9P3-201ENST00000428659 RGL3Q3MIN7 710 aa5.32□□□□□ -1.56
TIMM9P3-201ENST00000428659 IFNL3Q8IZI9 196 aa5.32□□□□□ -1.56
TIMM9P3-201ENST00000428659 LILRB2Q8N423 598 aa5.32□□□□□ -1.56
TIMM9P3-201ENST00000428659 TXNDC5Q8NBS9 432 aaKnown RBP5.32□□□□□ -1.56
TIMM9P3-201ENST00000428659 PCDH19Q8TAB3 1148 aa5.32□□□□□ -1.56
TIMM9P3-201ENST00000428659 KISS1RQ969F8 398 aaPredicted RBP5.32□□□□□ -1.56
TIMM9P3-201ENST00000428659 PCDHA9Q9Y5H5 950 aa5.32□□□□□ -1.56
TIMM9P3-201ENST00000428659 KCNK3O14649 394 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 SMARCA5O60264 1052 aaPredicted RBP5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 AMY2AP04746 511 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 ZNF28P17035 718 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 AMY2BP19961 511 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 IL13P35225 146 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 NKX3-2P78367 333 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 NFKB2Q00653 900 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 LCE5AQ5TCM9 118 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 FSTL4Q6MZW2 842 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 SCUBE1Q8IWY4 988 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 PMFBP1Q8TBY8 1022 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 ZNF669Q96BR6 464 aaPredicted RBP5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 MBD6Q96DN6 1003 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 TEPSINQ96N21 525 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 DEPDC7Q96QD5 511 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 BDH2Q9BUT1 245 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 KANSL2Q9H9L4 492 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 NTMQ9P121 344 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 SIRPGQ9P1W8 387 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 CBLCQ9ULV8 474 aa5.31□□□□□ -1.56
TIMM9P3-201ENST00000428659 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 FAM90A27PA6NNH2 459 aa5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 U2SURPO15042 1029 aaKnown RBP5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 CKMP06732 381 aa5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 SRGAP2CP0DJJ0 459 aa5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 PYGMP11217 842 aa5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 ZFYVE27Q5T4F4 411 aa5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 TTLL7Q6ZT98 887 aa5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 OSTM1Q86WC4 334 aa5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 UHMK1Q8TAS1 419 aaKnown RBP5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 SLC7A14Q8TBB6 771 aa5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 RBM15Q96T37 977 aaKnown RBP eCLIP5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 DNAJC2Q99543 621 aaKnown RBP5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 CDC6Q99741 560 aa5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 KRTAP4-11Q9BYQ6 195 aa5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 CROTQ9UKG9 612 aa5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 MRPS23Q9Y3D9 190 aaKnown RBP5.3□□□□□ -1.56
TIMM9P3-201ENST00000428659 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 B4GALT3O60512 393 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 IL18BPO95998 194 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 GNAT1P11488 350 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 SYN1P17600 705 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 JAM2P57087 298 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 SEC23AQ15436 765 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 KIZQ2M2Z5 673 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 PAN2Q504Q3 1202 aaKnown RBP5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 TM4SF20Q53R12 229 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 NBPF6Q5VWK0 638 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 ZC3H18Q86VM9 953 aaKnown RBP5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 TTLL6Q8N841 843 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 SCLYQ96I15 445 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 NBPF4Q96M43 638 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 PTPN18Q99952 460 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 ZFYVE21Q9BQ24 234 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 YIPF4Q9BSR8 244 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 DHRS4Q9BTZ2 278 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 SSBP3Q9BWW4 388 aaPredicted RBP5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 SLC52A2Q9HAB3 445 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 USP40Q9NVE5 1235 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 INVSQ9Y283 1065 aa5.29□□□□□ -1.56
TIMM9P3-201ENST00000428659 MAN2B1O00754 1011 aa5.28□□□□□ -1.56
TIMM9P3-201ENST00000428659 RASGRP1O95267 797 aa5.28□□□□□ -1.56
TIMM9P3-201ENST00000428659 CRTAMO95727 393 aa5.28□□□□□ -1.56
TIMM9P3-201ENST00000428659 FAHP16930 419 aa5.28□□□□□ -1.56
TIMM9P3-201ENST00000428659 KCNA6P17658 529 aa5.28□□□□□ -1.56
TIMM9P3-201ENST00000428659 EPHA5P54756 1037 aa5.28□□□□□ -1.56
TIMM9P3-201ENST00000428659 CHRNA2Q15822 529 aa5.28□□□□□ -1.56
TIMM9P3-201ENST00000428659 TBC1D10BQ4KMP7 808 aaPredicted RBP5.28□□□□□ -1.56
TIMM9P3-201ENST00000428659 UBXN11Q5T124 520 aa5.28□□□□□ -1.56
TIMM9P3-201ENST00000428659 ABHD17CQ6PCB6 329 aa5.28□□□□□ -1.56
TIMM9P3-201ENST00000428659 FGD2Q7Z6J4 655 aa5.28□□□□□ -1.56
TIMM9P3-201ENST00000428659 NUDT10Q8NFP7 164 aa5.28□□□□□ -1.56
TIMM9P3-201ENST00000428659 PHOSPHO1Q8TCT1 267 aa5.28□□□□□ -1.56
TIMM9P3-201ENST00000428659 PTPRN2Q92932 1015 aa5.28□□□□□ -1.56
TIMM9P3-201ENST00000428659 NUDT11Q96G61 164 aa5.28□□□□□ -1.56
TIMM9P3-201ENST00000428659 YTHDC1Q96MU7 727 aaKnown RBP5.28□□□□□ -1.56
TIMM9P3-201ENST00000428659 PDGFDQ9GZP0 370 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms