RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 GPR20Q99678 358 aa17.91■□□□□ 0.46
SEC13-210ENST00000428626 TUT1Q9H6E5 874 aaKnown RBP17.91■□□□□ 0.46
SEC13-210ENST00000428626 MTCH2Q9Y6C9 303 aa17.91■□□□□ 0.46
SEC13-210ENST00000428626 PIK3CDO00329 1044 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 TREHO43280 583 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 LPXNO60711 386 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 SMIM10L2AP0DMW4 78 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 SMIM10L2BP0DMW5 78 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 POU3F3P20264 500 aaPredicted RBP17.9■□□□□ 0.46
SEC13-210ENST00000428626 KIF5BP33176 963 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 LIFRP42702 1097 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 KCNJ6P48051 423 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 MKRN4PQ13434 485 aaPredicted RBP17.9■□□□□ 0.46
SEC13-210ENST00000428626 GNPTABQ3T906 1256 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 PCNX4Q63HM2 1172 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 METTL7BQ6UX53 244 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 NFXL1Q6ZNB6 911 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 SMARCC2Q8TAQ2 1214 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 ATXN2LQ8WWM7 1075 aaKnown RBP17.9■□□□□ 0.46
SEC13-210ENST00000428626 ARNTL2Q8WYA1 636 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 TMEM87BQ96K49 555 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 ASB2Q96Q27 587 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 RNPEPQ9H4A4 650 aa17.9■□□□□ 0.46
SEC13-210ENST00000428626 COL4A4P53420 1690 aaPredicted RBP17.9■□□□□ 0.46
SEC13-210ENST00000428626 CCDC69A6NI79 296 aa17.89■□□□□ 0.45
SEC13-210ENST00000428626 FIBPO43427 364 aa17.89■□□□□ 0.45
SEC13-210ENST00000428626 TLL1O43897 1013 aa17.89■□□□□ 0.45
SEC13-210ENST00000428626 ATP9AO75110 1047 aa17.89■□□□□ 0.45
SEC13-210ENST00000428626 STAM2O75886 525 aa17.89■□□□□ 0.45
SEC13-210ENST00000428626 PARNO95453 639 aaKnown RBP17.89■□□□□ 0.45
SEC13-210ENST00000428626 UBE2SQ16763 222 aa17.89■□□□□ 0.45
SEC13-210ENST00000428626 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.89■□□□□ 0.45
SEC13-210ENST00000428626 CCDC82Q8N4S0 544 aa17.89■□□□□ 0.45
SEC13-210ENST00000428626 SYMPKQ92797 1274 aaKnown RBP17.89■□□□□ 0.45
SEC13-210ENST00000428626 LZTS2Q9BRK4 669 aa17.89■□□□□ 0.45
SEC13-210ENST00000428626 ANO2Q9NQ90 1003 aa17.89■□□□□ 0.45
SEC13-210ENST00000428626 BRWD1Q9NSI6 2320 aa17.89■□□□□ 0.45
SEC13-210ENST00000428626 MICAL3Q7RTP6 2002 aa17.89■□□□□ 0.45
SEC13-210ENST00000428626 C17orf102A2RUQ5 167 aa17.88■□□□□ 0.45
SEC13-210ENST00000428626 THPOP40225 353 aa17.88■□□□□ 0.45
SEC13-210ENST00000428626 SP4Q02446 784 aa17.88■□□□□ 0.45
SEC13-210ENST00000428626 TFF2Q03403 129 aa17.88■□□□□ 0.45
SEC13-210ENST00000428626 NEDD9Q14511 834 aa17.88■□□□□ 0.45
SEC13-210ENST00000428626 TMTC3Q6ZXV5 915 aa17.88■□□□□ 0.45
SEC13-210ENST00000428626 TMTC2Q8N394 836 aa17.88■□□□□ 0.45
SEC13-210ENST00000428626 DBF4BQ8NFT6 615 aa17.88■□□□□ 0.45
SEC13-210ENST00000428626 ATP6V0A1Q93050 837 aa17.88■□□□□ 0.45
SEC13-210ENST00000428626 TCEANC2Q96MN5 208 aa17.88■□□□□ 0.45
SEC13-210ENST00000428626 SETD4Q9NVD3 440 aa17.88■□□□□ 0.45
SEC13-210ENST00000428626 SEC63Q9UGP8 760 aaKnown RBP17.88■□□□□ 0.45
SEC13-210ENST00000428626 BDP1A6H8Y1 2624 aa17.88■□□□□ 0.45
SEC13-210ENST00000428626 TCF20Q9UGU0 1960 aaKnown RBP17.88■□□□□ 0.45
SEC13-210ENST00000428626 ABHD14A-ACY1A0A1B0GW23 586 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 RSPH10B2B2RC85 870 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 KIF28PB7ZC32 967 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 NOP56O00567 594 aaKnown RBP17.87■□□□□ 0.45
SEC13-210ENST00000428626 LGR5O75473 907 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 GJB5O95377 273 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 RSPH10BP0C881 870 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 ITGB5P18084 799 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 GNAQP50148 359 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 ADAM17P78536 824 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 GRB10Q13322 594 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 UTP14CQ5TAP6 766 aaKnown RBP17.87■□□□□ 0.45
SEC13-210ENST00000428626 FAM117BQ6P1L5 589 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 SGMS1Q86VZ5 419 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 RASEFQ8IZ41 740 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 FANCBQ8NB91 859 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 CUL5Q93034 780 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 USP26Q9BXU7 913 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 PSTPIP2Q9H939 334 aa17.87■□□□□ 0.45
SEC13-210ENST00000428626 KCNA2P16389 499 aa17.86■□□□□ 0.45
SEC13-210ENST00000428626 MRPS5P82675 430 aaKnown RBP17.86■□□□□ 0.45
SEC13-210ENST00000428626 IKBKEQ14164 716 aa17.86■□□□□ 0.45
SEC13-210ENST00000428626 ADCK5Q3MIX3 580 aa17.86■□□□□ 0.45
SEC13-210ENST00000428626 BMP2KLQ5H9B9 411 aa17.86■□□□□ 0.45
SEC13-210ENST00000428626 TYW1BQ6NUM6 668 aa17.86■□□□□ 0.45
SEC13-210ENST00000428626 MICU3Q86XE3 530 aa17.86■□□□□ 0.45
SEC13-210ENST00000428626 SENP7Q9BQF6 1050 aa17.86■□□□□ 0.45
SEC13-210ENST00000428626 BRPF3Q9ULD4 1205 aa17.86■□□□□ 0.45
SEC13-210ENST00000428626 SLC12A7Q9Y666 1083 aa17.86■□□□□ 0.45
SEC13-210ENST00000428626 CTSHP09668 335 aa17.85■□□□□ 0.45
SEC13-210ENST00000428626 CALM1P0DP23 149 aa17.85■□□□□ 0.45
SEC13-210ENST00000428626 CALM2P0DP24 149 aa17.85■□□□□ 0.45
SEC13-210ENST00000428626 CALM3P0DP25 149 aa17.85■□□□□ 0.45
SEC13-210ENST00000428626 EXOSC10Q01780 885 aaKnown RBP17.85■□□□□ 0.45
SEC13-210ENST00000428626 FUT2Q10981 343 aa17.85■□□□□ 0.45
SEC13-210ENST00000428626 PLEKHG4Q58EX7 1191 aa17.85■□□□□ 0.45
SEC13-210ENST00000428626 XRRA1Q6P2D8 792 aa17.85■□□□□ 0.45
SEC13-210ENST00000428626 ADAMTS19Q8TE59 1207 aa17.85■□□□□ 0.45
SEC13-210ENST00000428626 GDPD5Q8WTR4 605 aa17.85■□□□□ 0.45
SEC13-210ENST00000428626 LMBR1Q8WVP7 490 aa17.85■□□□□ 0.45
SEC13-210ENST00000428626 CNTNAP5Q8WYK1 1306 aa17.85■□□□□ 0.45
SEC13-210ENST00000428626 RAD9AQ99638 391 aa17.85■□□□□ 0.45
SEC13-210ENST00000428626 ZBED2Q9BTP6 218 aa17.85■□□□□ 0.45
SEC13-210ENST00000428626 UBIAD1Q9Y5Z9 338 aa17.85■□□□□ 0.45
SEC13-210ENST00000428626 GSTTP1A0A1W2PQM5 241 aa17.84■□□□□ 0.45
SEC13-210ENST00000428626 LINC01553A4QN01 128 aa17.84■□□□□ 0.45
SEC13-210ENST00000428626 KCNQ1P51787 676 aa17.84■□□□□ 0.45
SEC13-210ENST00000428626 WWC2Q6AWC2 1192 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms