RNA–Protein interactions for RNA: ENST00000428482.5

HDLBP-216, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 1,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-216ENST00000428482 RIC8AQ9NPQ8 531 aa11.73□□□□□ -0.53
HDLBP-216ENST00000428482 PDRG1Q9NUG6 133 aa11.73□□□□□ -0.53
HDLBP-216ENST00000428482 A0A1W2PPC1 479 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 SMCO2A6NFE2 343 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 FIBPO43427 364 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 EDIL3O43854 480 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 ZEB2O60315 1214 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 CABYRO75952 493 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 CTDNEP1O95476 244 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 TIMP1P01033 207 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 ICAM3P32942 547 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 EVCP57679 992 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 ITGB3BPQ13352 177 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-216ENST00000428482 NPY5RQ15761 445 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 NECAB1Q8N987 351 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 RNPC3Q96LT9 517 aaKnown RBP11.72□□□□□ -0.53
HDLBP-216ENST00000428482 GPR20Q99678 358 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 C16orf70Q9BSU1 422 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 C22orf23Q9BZE7 217 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 OSBPL7Q9BZF2 842 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 TM6SF1Q9BZW5 370 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 MAF1Q9H063 256 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 CXXC1Q9P0U4 656 aaPredicted RBP11.72□□□□□ -0.53
HDLBP-216ENST00000428482 HDAC6Q9UBN7 1215 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 UBIAD1Q9Y5Z9 338 aa11.72□□□□□ -0.53
HDLBP-216ENST00000428482 COL4A6Q14031 1691 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 KAT6AQ92794 2004 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 SPDYE3A6NKU9 549 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 GRXCR1A8MXD5 290 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 B4DLN1 442 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 SPATA31C2B4DYI2 1134 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 FAM86B1E9PN63 330 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 DDX39AO00148 427 aaKnown RBP11.71□□□□□ -0.53
HDLBP-216ENST00000428482 HAS3O00219 553 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 TLR3O15455 904 aaKnown RBP11.71□□□□□ -0.53
HDLBP-216ENST00000428482 JAK2O60674 1132 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 FAM86B2P0C5J1 330 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 ARP10275 920 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 IFNAR1P17181 557 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 MARK3P27448 753 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 SREBF1P36956 1147 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 MRPL12P52815 198 aaKnown RBP11.71□□□□□ -0.53
HDLBP-216ENST00000428482 ANAPC15P60006 121 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 KIAA0753Q2KHM9 967 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 GNPTABQ3T906 1256 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 UTP14CQ5TAP6 766 aaKnown RBP11.71□□□□□ -0.53
HDLBP-216ENST00000428482 MFSD5Q6N075 450 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 METTL7BQ6UX53 244 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 GJA10Q969M2 543 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 FAM161BQ96MY7 647 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 RNF26Q9BY78 433 aaPredicted RBP11.71□□□□□ -0.53
HDLBP-216ENST00000428482 MAP3K20Q9NYL2 800 aaKnown RBP11.71□□□□□ -0.53
HDLBP-216ENST00000428482 GTF2IRD1Q9UHL9 959 aa11.71□□□□□ -0.53
HDLBP-216ENST00000428482 MYH9P35579 1960 aaKnown RBP11.7□□□□□ -0.54
HDLBP-216ENST00000428482 MUC3AQ02505 3323 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 FAM205CA6NFA0 338 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 PRPF3O43395 683 aaKnown RBP11.7□□□□□ -0.54
HDLBP-216ENST00000428482 ARHGAP4P98171 946 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 MTMR1Q13613 665 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 DGKDQ16760 1214 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 ME3Q16798 604 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 TRIM71Q2Q1W2 868 aaKnown RBP11.7□□□□□ -0.54
HDLBP-216ENST00000428482 LRIT3Q3SXY7 679 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 TMEM240Q5SV17 173 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 TRAF7Q6Q0C0 670 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 DEFB128Q7Z7B8 93 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 SAMD3Q8N6K7 520 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 CRYGNQ8WXF5 182 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 GPRASP2Q96D09 838 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 PCYT2Q99447 389 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 KIF2CQ99661 725 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 MLXIPQ9HAP2 919 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 NLRC5Q86WI3 1866 aa11.7□□□□□ -0.54
HDLBP-216ENST00000428482 IGLV3-22A0A075B6J6 115 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 ESYT2A0FGR8 921 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 hCG_1984214I3L0E3 225 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 NOP56O00567 594 aaKnown RBP11.69□□□□□ -0.54
HDLBP-216ENST00000428482 ARHGEF15O94989 841 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 CCNE2O96020 404 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 CTSHP09668 335 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 SMIM10L2AP0DMW4 78 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 SMIM10L2BP0DMW5 78 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 PBX2P40425 430 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 TRAF1Q13077 416 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 AP3B2Q13367 1082 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 LAMC2Q13753 1193 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 MBTPS1Q14703 1052 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 GPNMBQ14956 572 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 PTGISQ16647 500 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 NFRKBQ6P4R8 1299 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 RUFY4Q6ZNE9 571 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 TMCO2Q7Z6W1 182 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-216ENST00000428482 REXO1Q8N1G1 1221 aaKnown RBP11.69□□□□□ -0.54
HDLBP-216ENST00000428482 ZNF713Q8N859 430 aaPredicted RBP11.69□□□□□ -0.54
HDLBP-216ENST00000428482 LENG9Q96B70 501 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 MXRA8Q9BRK3 442 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 ZMYND12Q9H0C1 365 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 JADE2Q9NQC1 790 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 KCNJ14Q9UNX9 436 aa11.69□□□□□ -0.54
HDLBP-216ENST00000428482 GSTTP1A0A1W2PQM5 241 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms