RNA–Protein interactions for RNA: ENST00000428104.2

PDE6D-203, Transcript of phosphodiesterase 6D, humanhuman

TSL 3

Gene PDE6D, Length 627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-203ENST00000428104 TSPY2A6NKD2 308 aa16.92■□□□□ 0.3
PDE6D-203ENST00000428104 SORBS3O60504 671 aa16.92■□□□□ 0.3
PDE6D-203ENST00000428104 GNAT2P19087 354 aa16.92■□□□□ 0.3
PDE6D-203ENST00000428104 PPARAQ07869 468 aa16.92■□□□□ 0.3
PDE6D-203ENST00000428104 ZBTB33Q86T24 672 aa16.92■□□□□ 0.3
PDE6D-203ENST00000428104 RMDN1Q96DB5 314 aa16.92■□□□□ 0.3
PDE6D-203ENST00000428104 PCDHGC5Q9Y5F6 944 aa16.92■□□□□ 0.3
PDE6D-203ENST00000428104 PATL2C9JE40 543 aaKnown RBP16.91■□□□□ 0.3
PDE6D-203ENST00000428104 TREHO43280 583 aa16.91■□□□□ 0.3
PDE6D-203ENST00000428104 SLC3A2P08195 630 aaKnown RBP16.91■□□□□ 0.3
PDE6D-203ENST00000428104 HOXD8P13378 290 aaPredicted RBP16.91■□□□□ 0.3
PDE6D-203ENST00000428104 RBM10P98175 930 aaKnown RBP16.91■□□□□ 0.3
PDE6D-203ENST00000428104 LAMC2Q13753 1193 aa16.91■□□□□ 0.3
PDE6D-203ENST00000428104 BTG3Q14201 252 aaPredicted RBP16.91■□□□□ 0.3
PDE6D-203ENST00000428104 USH1GQ495M9 461 aa16.91■□□□□ 0.3
PDE6D-203ENST00000428104 SUSD6Q92537 303 aa16.91■□□□□ 0.3
PDE6D-203ENST00000428104 TBC1D5Q92609 795 aa16.91■□□□□ 0.3
PDE6D-203ENST00000428104 APBB2Q92870 758 aa16.91■□□□□ 0.3
PDE6D-203ENST00000428104 TAAR1Q96RJ0 339 aa16.91■□□□□ 0.3
PDE6D-203ENST00000428104 PLVAPQ9BX97 442 aa16.91■□□□□ 0.3
PDE6D-203ENST00000428104 COL20A1Q9P218 1284 aa16.91■□□□□ 0.3
PDE6D-203ENST00000428104 MRVI1Q9Y6F6 885 aa16.91■□□□□ 0.3
PDE6D-203ENST00000428104 MYH7P12883 1935 aa16.91■□□□□ 0.3
PDE6D-203ENST00000428104 C17orf102A2RUQ5 167 aa16.9■□□□□ 0.3
PDE6D-203ENST00000428104 ITGB1P05556 798 aa16.9■□□□□ 0.3
PDE6D-203ENST00000428104 ATF7P17544 494 aaPredicted RBP16.9■□□□□ 0.3
PDE6D-203ENST00000428104 SP100P23497 879 aaPredicted RBP16.9■□□□□ 0.3
PDE6D-203ENST00000428104 STXBP2Q15833 593 aa16.9■□□□□ 0.3
PDE6D-203ENST00000428104 DGLUCYQ7Z3D6 616 aa16.9■□□□□ 0.3
PDE6D-203ENST00000428104 KBTBD3Q8NAB2 608 aa16.9■□□□□ 0.3
PDE6D-203ENST00000428104 KREMEN2Q8NCW0 462 aa16.9■□□□□ 0.3
PDE6D-203ENST00000428104 SPPL3Q8TCT6 385 aa16.9■□□□□ 0.3
PDE6D-203ENST00000428104 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.3
PDE6D-203ENST00000428104 EP300Q09472 2414 aaPredicted RBP16.89■□□□□ 0.29
PDE6D-203ENST00000428104 RNF113AO15541 343 aaKnown RBP16.89■□□□□ 0.29
PDE6D-203ENST00000428104 MCTP2Q6DN12 878 aa16.89■□□□□ 0.29
PDE6D-203ENST00000428104 SYTL5Q8TDW5 730 aaPredicted RBP16.89■□□□□ 0.29
PDE6D-203ENST00000428104 NSUN6Q8TEA1 469 aaKnown RBP16.89■□□□□ 0.29
PDE6D-203ENST00000428104 CNTNAP3BQ96NU0 1288 aa16.89■□□□□ 0.29
PDE6D-203ENST00000428104 CNTNAP3Q9BZ76 1288 aa16.89■□□□□ 0.29
PDE6D-203ENST00000428104 NACAP1Q9BZK3 213 aa16.89■□□□□ 0.29
PDE6D-203ENST00000428104 NAPBQ9H115 298 aa16.89■□□□□ 0.29
PDE6D-203ENST00000428104 MRPL42Q9Y6G3 142 aaKnown RBP16.89■□□□□ 0.29
PDE6D-203ENST00000428104 WDR19Q8NEZ3 1342 aa16.89■□□□□ 0.29
PDE6D-203ENST00000428104 CFAP47Q6ZTR5 3102 aa16.88■□□□□ 0.29
PDE6D-203ENST00000428104 RANBP6O60518 1105 aaKnown RBP16.88■□□□□ 0.29
PDE6D-203ENST00000428104 RAB11FIP3O75154 756 aa16.88■□□□□ 0.29
PDE6D-203ENST00000428104 PPFIA4O75335 1185 aa16.88■□□□□ 0.29
PDE6D-203ENST00000428104 SMIM10L2AP0DMW4 78 aa16.88■□□□□ 0.29
PDE6D-203ENST00000428104 SMIM10L2BP0DMW5 78 aa16.88■□□□□ 0.29
PDE6D-203ENST00000428104 HOXC8P31273 242 aa16.88■□□□□ 0.29
PDE6D-203ENST00000428104 NOVP48745 357 aa16.88■□□□□ 0.29
PDE6D-203ENST00000428104 CTDSPL2Q05D32 466 aa16.88■□□□□ 0.29
PDE6D-203ENST00000428104 HSDL1Q3SXM5 330 aa16.88■□□□□ 0.29
PDE6D-203ENST00000428104 SIRT2Q8IXJ6 389 aa16.88■□□□□ 0.29
PDE6D-203ENST00000428104 RGS22Q8NE09 1264 aa16.88■□□□□ 0.29
PDE6D-203ENST00000428104 VN1R2Q8NFZ6 395 aa16.88■□□□□ 0.29
PDE6D-203ENST00000428104 P2RX5Q93086 422 aa16.88■□□□□ 0.29
PDE6D-203ENST00000428104 ZNF689Q96CS4 500 aaPredicted RBP16.88■□□□□ 0.29
PDE6D-203ENST00000428104 RMDN3Q96TC7 470 aa16.88■□□□□ 0.29
PDE6D-203ENST00000428104 C16orf70Q9BSU1 422 aa16.88■□□□□ 0.29
PDE6D-203ENST00000428104 PNMA2Q9UL42 364 aa16.88■□□□□ 0.29
PDE6D-203ENST00000428104 TPRP12270 2363 aaKnown RBP16.87■□□□□ 0.29
PDE6D-203ENST00000428104 PER2O15055 1255 aa16.87■□□□□ 0.29
PDE6D-203ENST00000428104 CAND2O75155 1236 aa16.87■□□□□ 0.29
PDE6D-203ENST00000428104 MYSM1Q5VVJ2 828 aa16.87■□□□□ 0.29
PDE6D-203ENST00000428104 KLHL23Q8NBE8 558 aa16.87■□□□□ 0.29
PDE6D-203ENST00000428104 POF1BQ8WVV4 589 aa16.87■□□□□ 0.29
PDE6D-203ENST00000428104 SPATA33Q96N06 139 aa16.87■□□□□ 0.29
PDE6D-203ENST00000428104 IWS1Q96ST2 819 aa16.87■□□□□ 0.29
PDE6D-203ENST00000428104 SEC62Q99442 399 aaKnown RBP16.87■□□□□ 0.29
PDE6D-203ENST00000428104 SMOC2Q9H3U7 446 aa16.87■□□□□ 0.29
PDE6D-203ENST00000428104 RNPEPQ9H4A4 650 aa16.87■□□□□ 0.29
PDE6D-203ENST00000428104 TLE6Q9H808 572 aa16.87■□□□□ 0.29
PDE6D-203ENST00000428104 DGKIO75912 1065 aa16.86■□□□□ 0.29
PDE6D-203ENST00000428104 BRD1O95696 1058 aa16.86■□□□□ 0.29
PDE6D-203ENST00000428104 EIF2AK2P19525 551 aaKnown RBP16.86■□□□□ 0.29
PDE6D-203ENST00000428104 ASTLQ6HA08 431 aaPredicted RBP16.86■□□□□ 0.29
PDE6D-203ENST00000428104 TMEM47Q9BQJ4 181 aa16.86■□□□□ 0.29
PDE6D-203ENST00000428104 ENPP3O14638 875 aa16.85■□□□□ 0.29
PDE6D-203ENST00000428104 EIF3JO75822 258 aaKnown RBP16.85■□□□□ 0.29
PDE6D-203ENST00000428104 GHRP10912 638 aa16.85■□□□□ 0.29
PDE6D-203ENST00000428104 PDHBP11177 359 aa16.85■□□□□ 0.29
PDE6D-203ENST00000428104 TOP1P11387 765 aaKnown RBP16.85■□□□□ 0.29
PDE6D-203ENST00000428104 ZNF543Q08ER8 600 aa16.85■□□□□ 0.29
PDE6D-203ENST00000428104 CELF3Q5SZQ8 465 aaKnown RBP16.85■□□□□ 0.29
PDE6D-203ENST00000428104 PANK1Q8TE04 598 aa16.85■□□□□ 0.29
PDE6D-203ENST00000428104 TSHZ2Q9NRE2 1034 aa16.85■□□□□ 0.29
PDE6D-203ENST00000428104 ACACBO00763 2458 aa16.85■□□□□ 0.29
PDE6D-203ENST00000428104 H3BRB1 525 aa16.84■□□□□ 0.29
PDE6D-203ENST00000428104 SMARCA5O60264 1052 aaPredicted RBP16.84■□□□□ 0.29
PDE6D-203ENST00000428104 PPFIA3O75145 1194 aa16.84■□□□□ 0.29
PDE6D-203ENST00000428104 HMMRO75330 724 aa16.84■□□□□ 0.29
PDE6D-203ENST00000428104 GGPS1O95749 300 aa16.84■□□□□ 0.29
PDE6D-203ENST00000428104 ZFYP08048 801 aaPredicted RBP16.84■□□□□ 0.29
PDE6D-203ENST00000428104 MTMR3Q13615 1198 aa16.84■□□□□ 0.29
PDE6D-203ENST00000428104 PAN2Q504Q3 1202 aaKnown RBP16.84■□□□□ 0.29
PDE6D-203ENST00000428104 NAALADL2Q58DX5 795 aa16.84■□□□□ 0.29
PDE6D-203ENST00000428104 FAM26DQ5JW98 314 aa16.84■□□□□ 0.29
PDE6D-203ENST00000428104 ARHGEF16Q5VV41 709 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms