RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 H3BRB1 525 aa31.32■■■□□ 2.6
LMO1-202ENST00000428101 NOP56O00567 594 aaKnown RBP31.32■■■□□ 2.6
LMO1-202ENST00000428101 NBNO60934 754 aa31.32■■■□□ 2.6
LMO1-202ENST00000428101 SYNE3Q6ZMZ3 975 aa31.32■■■□□ 2.6
LMO1-202ENST00000428101 PHOSPHO2Q8TCD6 241 aa31.32■■■□□ 2.6
LMO1-202ENST00000428101 SENP7Q9BQF6 1050 aa31.32■■■□□ 2.6
LMO1-202ENST00000428101 TUT1Q9H6E5 874 aaKnown RBP31.32■■■□□ 2.6
LMO1-202ENST00000428101 CNTNAP5Q8WYK1 1306 aa31.31■■■□□ 2.6
LMO1-202ENST00000428101 RBAK-RBAKDNI3L0D1 243 aa31.31■■■□□ 2.6
LMO1-202ENST00000428101 BAIAP3O94812 1187 aa31.31■■■□□ 2.6
LMO1-202ENST00000428101 PARNO95453 639 aaKnown RBP31.31■■■□□ 2.6
LMO1-202ENST00000428101 CXCL10P02778 98 aa31.31■■■□□ 2.6
LMO1-202ENST00000428101 HOXC8P31273 242 aa31.31■■■□□ 2.6
LMO1-202ENST00000428101 UBE2SQ16763 222 aa31.31■■■□□ 2.6
LMO1-202ENST00000428101 FUT2Q10981 343 aa31.3■■■□□ 2.6
LMO1-202ENST00000428101 ZNF618Q5T7W0 954 aa31.3■■■□□ 2.6
LMO1-202ENST00000428101 PPP2R2DQ66LE6 453 aa31.3■■■□□ 2.6
LMO1-202ENST00000428101 HEATR3Q7Z4Q2 680 aa31.3■■■□□ 2.6
LMO1-202ENST00000428101 COL25A1Q9BXS0 654 aaPredicted RBP31.3■■■□□ 2.6
LMO1-202ENST00000428101 USP26Q9BXU7 913 aa31.3■■■□□ 2.6
LMO1-202ENST00000428101 RBM28Q9NW13 759 aaKnown RBP31.3■■■□□ 2.6
LMO1-202ENST00000428101 KRT32Q14532 448 aa31.29■■■□□ 2.6
LMO1-202ENST00000428101 TCTN1Q2MV58 587 aa31.29■■■□□ 2.6
LMO1-202ENST00000428101 NLRX1Q86UT6 975 aa31.29■■■□□ 2.6
LMO1-202ENST00000428101 SERINC5Q86VE9 423 aa31.29■■■□□ 2.6
LMO1-202ENST00000428101 ZBTB43O43298 467 aa31.28■■■□□ 2.6
LMO1-202ENST00000428101 SMIM10L2AP0DMW4 78 aa31.28■■■□□ 2.6
LMO1-202ENST00000428101 SMIM10L2BP0DMW5 78 aa31.28■■■□□ 2.6
LMO1-202ENST00000428101 ITGB5P18084 799 aa31.28■■■□□ 2.6
LMO1-202ENST00000428101 MBTPS1Q14703 1052 aa31.28■■■□□ 2.6
LMO1-202ENST00000428101 WWC2Q6AWC2 1192 aa31.28■■■□□ 2.6
LMO1-202ENST00000428101 HERC6Q8IVU3 1022 aa31.28■■■□□ 2.6
LMO1-202ENST00000428101 KCNB2Q92953 911 aa31.28■■■□□ 2.6
LMO1-202ENST00000428101 C17orf102A2RUQ5 167 aa31.27■■■□□ 2.6
LMO1-202ENST00000428101 ATP9AO75110 1047 aa31.27■■■□□ 2.6
LMO1-202ENST00000428101 CA3P07451 260 aa31.27■■■□□ 2.6
LMO1-202ENST00000428101 RTN1Q16799 776 aa31.27■■■□□ 2.6
LMO1-202ENST00000428101 TYW1BQ6NUM6 668 aa31.27■■■□□ 2.6
LMO1-202ENST00000428101 CNKSR3Q6P9H4 555 aa31.27■■■□□ 2.6
LMO1-202ENST00000428101 ATP6V0A1Q93050 837 aa31.27■■■□□ 2.6
LMO1-202ENST00000428101 GPRASP2Q96D09 838 aa31.27■■■□□ 2.6
LMO1-202ENST00000428101 CCDC136Q96JN2 1154 aa31.27■■■□□ 2.6
LMO1-202ENST00000428101 RNPEPQ9H4A4 650 aa31.27■■■□□ 2.6
LMO1-202ENST00000428101 FAM217BQ9NTX9 383 aaPredicted RBP31.27■■■□□ 2.6
LMO1-202ENST00000428101 PCDHA6Q9UN73 950 aa31.27■■■□□ 2.6
LMO1-202ENST00000428101 PCDHA8Q9Y5H6 950 aa31.27■■■□□ 2.6
LMO1-202ENST00000428101 KCNA2P16389 499 aa31.26■■■□□ 2.59
LMO1-202ENST00000428101 WDR5P61964 334 aaKnown RBP31.26■■■□□ 2.59
LMO1-202ENST00000428101 TRIM50Q86XT4 487 aa31.26■■■□□ 2.59
LMO1-202ENST00000428101 UBIAD1Q9Y5Z9 338 aa31.26■■■□□ 2.59
LMO1-202ENST00000428101 SPDYE3A6NKU9 549 aa31.25■■■□□ 2.59
LMO1-202ENST00000428101 TREHO43280 583 aa31.25■■■□□ 2.59
LMO1-202ENST00000428101 SP4Q02446 784 aa31.25■■■□□ 2.59
LMO1-202ENST00000428101 GIMAP8Q8ND71 665 aaPredicted RBP31.25■■■□□ 2.59
LMO1-202ENST00000428101 V9GY48 417 aaPredicted RBP31.25■■■□□ 2.59
LMO1-202ENST00000428101 KAT6AQ92794 2004 aa31.24■■■□□ 2.59
LMO1-202ENST00000428101 KLF18A0A0U1RQI7 1052 aa31.24■■■□□ 2.59
LMO1-202ENST00000428101 ARHGEF15O94989 841 aa31.24■■■□□ 2.59
LMO1-202ENST00000428101 HMGB1P09429 215 aaKnown RBP31.24■■■□□ 2.59
LMO1-202ENST00000428101 CPA1P15085 419 aa31.24■■■□□ 2.59
LMO1-202ENST00000428101 IGFBP4P22692 258 aa31.24■■■□□ 2.59
LMO1-202ENST00000428101 CDC27P30260 824 aa31.24■■■□□ 2.59
LMO1-202ENST00000428101 THPOP40225 353 aa31.24■■■□□ 2.59
LMO1-202ENST00000428101 UTP14CQ5TAP6 766 aaKnown RBP31.24■■■□□ 2.59
LMO1-202ENST00000428101 CDHR1Q96JP9 859 aa31.24■■■□□ 2.59
LMO1-202ENST00000428101 KCNJ6P48051 423 aa31.23■■■□□ 2.59
LMO1-202ENST00000428101 PPM1EQ8WY54 764 aa31.23■■■□□ 2.59
LMO1-202ENST00000428101 SETD4Q9NVD3 440 aa31.23■■■□□ 2.59
LMO1-202ENST00000428101 GOLGA8AA7E2F4 631 aa31.22■■■□□ 2.59
LMO1-202ENST00000428101 GOLGA8BA8MQT2 603 aa31.22■■■□□ 2.59
LMO1-202ENST00000428101 HSPA4P34932 840 aa31.22■■■□□ 2.59
LMO1-202ENST00000428101 DEFB103AP81534 67 aa31.22■■■□□ 2.59
LMO1-202ENST00000428101 TMCO2Q7Z6W1 182 aaPredicted RBP31.22■■■□□ 2.59
LMO1-202ENST00000428101 RIC8AQ9NPQ8 531 aa31.22■■■□□ 2.59
LMO1-202ENST00000428101 JADE2Q9NQC1 790 aa31.22■■■□□ 2.59
LMO1-202ENST00000428101 PRDM6Q9NQX0 595 aa31.22■■■□□ 2.59
LMO1-202ENST00000428101 ZNF215Q9UL58 517 aaPredicted RBP31.22■■■□□ 2.59
LMO1-202ENST00000428101 TRANK1O15050 2925 aa31.21■■■□□ 2.59
LMO1-202ENST00000428101 REV3LO60673 3130 aa31.21■■■□□ 2.59
LMO1-202ENST00000428101 ABHD14A-ACY1A0A1B0GW23 586 aa31.21■■■□□ 2.59
LMO1-202ENST00000428101 RSPH10B2B2RC85 870 aa31.21■■■□□ 2.59
LMO1-202ENST00000428101 KIF28PB7ZC32 967 aa31.21■■■□□ 2.59
LMO1-202ENST00000428101 RSPH10BP0C881 870 aa31.21■■■□□ 2.59
LMO1-202ENST00000428101 RCAN1P53805 252 aa31.21■■■□□ 2.59
LMO1-202ENST00000428101 NAPAP54920 295 aa31.21■■■□□ 2.59
LMO1-202ENST00000428101 ADAM17P78536 824 aa31.21■■■□□ 2.59
LMO1-202ENST00000428101 TAP1Q03518 808 aa31.21■■■□□ 2.59
LMO1-202ENST00000428101 MTMR1Q13613 665 aa31.21■■■□□ 2.59
LMO1-202ENST00000428101 SNX14Q9Y5W7 946 aa31.21■■■□□ 2.59
LMO1-202ENST00000428101 GSTTP1A0A1W2PQM5 241 aa31.2■■■□□ 2.59
LMO1-202ENST00000428101 STXBP3O00186 592 aa31.2■■■□□ 2.59
LMO1-202ENST00000428101 TCF7P36402 384 aaPredicted RBP31.2■■■□□ 2.59
LMO1-202ENST00000428101 PPP1R18Q6NYC8 613 aa31.2■■■□□ 2.59
LMO1-202ENST00000428101 CERS4Q9HA82 394 aa31.2■■■□□ 2.59
LMO1-202ENST00000428101 SPTBN5Q9NRC6 3674 aaKnown RBP31.19■■■□□ 2.58
LMO1-202ENST00000428101 EPOPA6NHQ4 379 aa31.19■■■□□ 2.58
LMO1-202ENST00000428101 RFXAPO00287 272 aa31.19■■■□□ 2.58
LMO1-202ENST00000428101 TLL1O43897 1013 aa31.19■■■□□ 2.58
LMO1-202ENST00000428101 LGR5O75473 907 aa31.19■■■□□ 2.58
LMO1-202ENST00000428101 IKBKEQ14164 716 aa31.19■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms