RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 MAGEF1Q9HAY2 307 aa10.79□□□□□ -0.68
CLTCL1-202ENST00000427926 COL15A1P39059 1388 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 MEIS1O00470 390 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 CDR2Q01850 454 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 MTMR1Q13613 665 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 MORC3Q14149 939 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 TSPYL2Q9H2G4 693 aaPredicted RBP10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 VCX3BQ9H321 246 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 COPRSQ9NQ92 184 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 PTGDRQ13258 359 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 ZBTB9Q96C00 473 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 MAP3K20Q9NYL2 800 aaKnown RBP10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 SHROOM2Q13796 1616 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 ARHGAP4P98171 946 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 NKX1-1Q15270 411 aaPredicted RBP10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 FAM186BQ8IYM0 893 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 SPATA33Q96N06 139 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 MAGED2Q9UNF1 606 aaPredicted RBP10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 GTPBP6O43824 516 aaPredicted RBP10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 NR2F2P24468 414 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 CHRNA5P30532 468 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 PROSER3Q2NL68 480 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 ACBD5Q5T8D3 534 aaPredicted RBP10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 ANKRD20A3Q5VUR7 823 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 DENND2CQ68D51 928 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 CAPN12Q6ZSI9 719 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 GCOM2Q9BZD3 368 aaPredicted RBP10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 ATP6V0A4Q9HBG4 840 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 ZNRF3Q9ULT6 936 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 ROBO2Q9HCK4 1378 aa10.78□□□□□ -0.68
CLTCL1-202ENST00000427926 PNMA6FA0A0J9YX94 578 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 USP17L15C9J2P7 530 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 USP17L13C9JLJ4 530 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 USP17L11C9JVI0 530 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 USP17L18D6R9N7 530 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 USP17L22D6RA61 530 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 USP17L17D6RBQ6 530 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 USP17L19D6RCP7 530 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 USP17L20D6RJB6 530 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 CASQ2O14958 399 aaPredicted RBP10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 PMLP29590 882 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 YWHAGP61981 247 aaKnown RBP eCLIP10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 PDE1BQ01064 536 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 USP17L24Q0WX57 530 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 SLC10A5Q5PT55 438 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 LRRC31Q6UY01 552 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 LCORLQ8N3X6 602 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 BEST2Q8NFU1 509 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 HAUS8Q9BT25 410 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 ACAD9Q9H845 621 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 CNOT7Q9UIV1 285 aaKnown RBP10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 SLC13A4Q9UKG4 626 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 EIF3CLB5ME19 914 aaKnown RBP10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 CAPN15O75808 1086 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 DDIT3P35638 169 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 CASP2P42575 452 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 MTMR3Q13615 1198 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 TUBB2AQ13885 445 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 MAPK6Q16659 721 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 DNAJC24Q6P3W2 148 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 RUFY4Q6ZNE9 571 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 ARHGAP24Q8N264 748 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 RASGRP4Q8TDF6 673 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 SSH3Q8TE77 659 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 EIF3CQ99613 913 aaKnown RBP10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 TUBB2BQ9BVA1 445 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 STK17AQ9UEE5 414 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 SLC4A7Q9Y6M7 1214 aa10.77□□□□□ -0.68
CLTCL1-202ENST00000427926 NVLO15381 856 aaKnown RBP10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 PRPSAP2O60256 369 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 UPP2O95045 317 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 UBE2SQ16763 222 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 ARHGEF18Q6ZSZ5 1173 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 RPGRIP1Q96KN7 1286 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 VPS18Q9P253 973 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 BCAP29Q9UHQ4 241 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 DOLKQ9UPQ8 538 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 BTBD18B2RXH4 712 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 RPN1P04843 607 aaKnown RBP10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 PAK2Q13177 524 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 FAM117BQ6P1L5 589 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 OR6J1Q8NGC5 347 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 ADGRL3Q9HAR2 1447 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 EBAG9O00559 213 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 MOCS3O95396 460 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 C6orf222P0C671 652 aaPredicted RBP10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 EVCP57679 992 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 CACNB1Q02641 598 aaPredicted RBP10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 BRIP1Q9BX63 1249 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 PARVGQ9HBI0 331 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 STRIP2Q9ULQ0 834 aa10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.77□□□□□ -0.69
CLTCL1-202ENST00000427926 SGK1O00141 431 aa10.76□□□□□ -0.69
CLTCL1-202ENST00000427926 GPC4O75487 556 aa10.76□□□□□ -0.69
CLTCL1-202ENST00000427926 LDHAP00338 332 aaKnown RBP10.76□□□□□ -0.69
CLTCL1-202ENST00000427926 ZNF445P59923 1031 aa10.76□□□□□ -0.69
CLTCL1-202ENST00000427926 TBC1D9BQ66K14 1250 aa10.76□□□□□ -0.69
CLTCL1-202ENST00000427926 VSIG1Q86XK7 387 aa10.76□□□□□ -0.69
CLTCL1-202ENST00000427926 CUEDC2Q9H467 287 aa10.76□□□□□ -0.69
CLTCL1-202ENST00000427926 KCNK3O14649 394 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms