RNA–Protein interactions for RNA: ENST00000427487.5

HDLBP-215, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 924 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-215	ENST00000427487	GOLGA6L4	A6NEF3	574 aa		13.59	□□□□□ -0.23
HDLBP-215	ENST00000427487	GAS7	O60861	476 aa		13.59	□□□□□ -0.23
HDLBP-215	ENST00000427487	HMGCR	P04035	888 aa		13.59	□□□□□ -0.23
HDLBP-215	ENST00000427487	MARCKS	P29966	332 aa	Predicted RBP	13.59	□□□□□ -0.23
HDLBP-215	ENST00000427487	TXK	P42681	527 aa		13.59	□□□□□ -0.23
HDLBP-215	ENST00000427487	CTCF	P49711	727 aa	Predicted RBP	13.59	□□□□□ -0.23
HDLBP-215	ENST00000427487	CAP1	Q01518	475 aa		13.59	□□□□□ -0.23
HDLBP-215	ENST00000427487	HAUS3	Q68CZ6	603 aa		13.59	□□□□□ -0.23
HDLBP-215	ENST00000427487	METTL7B	Q6UX53	244 aa		13.59	□□□□□ -0.23
HDLBP-215	ENST00000427487	FLRT1	Q9NZU1	646 aa		13.59	□□□□□ -0.23
HDLBP-215	ENST00000427487	TCEAL9	Q9UHQ7	104 aa		13.59	□□□□□ -0.23
HDLBP-215	ENST00000427487	ZSWIM8	A7E2V4	1837 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	VWA3A	A6NCI4	1184 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	TXLNA	P40222	546 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	JAK3	P52333	1124 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	ITGB3BP	Q13352	177 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	PKN2	Q16513	984 aa	Known RBP	13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	IL17A	Q16552	155 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	DUSP28	Q4G0W2	176 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	HYI	Q5T013	277 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	MAP3K21	Q5TCX8	1036 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	RESP18	Q5W5W9	173 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	SEPT14	Q6ZU15	432 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	FBXO16	Q8IX29	292 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	ERMN	Q8TAM6	284 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	RAET1E	Q8TD07	263 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	TRIB2	Q92519	343 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	CHAMP1	Q96JM3	812 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	CSRNP2	Q9H175	543 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	GDPD2	Q9HCC8	539 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	JPH1	Q9HDC5	661 aa	Predicted RBP	13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	FAM13B	Q9NYF5	915 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	LRWD1	Q9UFC0	647 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	USP25	Q9UHP3	1055 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	PCNT	O95613	3336 aa		13.58	□□□□□ -0.24
HDLBP-215	ENST00000427487	WDR64	B1ANS9	1081 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	ADCY3	O60266	1144 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	ATP9A	O75110	1047 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	PRPF40A	O75400	957 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	ATG7	O95352	703 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	MBD3	O95983	291 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	HSPA8	P11142	646 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	CYBA	P13498	195 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	UBA1	P22314	1058 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	TEC	P42680	631 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	NKX3-2	P78367	333 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	LAMC2	Q13753	1193 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	EPHA7	Q15375	998 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	CCL14	Q16627	93 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	CELF3	Q5SZQ8	465 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	KRT79	Q5XKE5	535 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	MRPS27	Q92552	414 aa	Known RBP	13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	NT5C3A	Q9H0P0	336 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	SLC9A2	Q9UBY0	812 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	FAM184B	Q9ULE4	1060 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	HPSE	Q9Y251	543 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	KDM3A	Q9Y4C1	1321 aa		13.57	□□□□□ -0.24
HDLBP-215	ENST00000427487	DKC1	O60832	514 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	FARP2	O94887	1054 aa	Predicted RBP	13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	GH1	P01241	217 aa		13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	TXN	P10599	105 aa	Known RBP	13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	AKR1A1	P14550	325 aa		13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	RPA1	P27694	616 aa		13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	UBA7	P41226	1012 aa		13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	SP2	Q02086	613 aa		13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	SHC4	Q6S5L8	630 aa		13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	HSD17B14	Q9BPX1	270 aa		13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	CUEDC2	Q9H467	287 aa		13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	TUFT1	Q9NNX1	390 aa		13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	PTPN22	Q9Y2R2	807 aa		13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	TRIM17	Q9Y577	477 aa		13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	PCDHA10	Q9Y5I2	948 aa		13.56	□□□□□ -0.24
HDLBP-215	ENST00000427487	SEPT4	O43236	478 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	MSC	O60682	206 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	DUSP11	O75319	330 aa	Known RBP	13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	LYPLA2	O95372	231 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	ARIH2	O95376	493 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	P4HB	P07237	508 aa	Known RBP	13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	HOXD8	P13378	290 aa	Predicted RBP	13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	GRK4	P32298	578 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	CYP2C19	P33261	490 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	TNFAIP2	Q03169	654 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	GRIN1	Q05586	938 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	CCDC144B	Q3MJ40	725 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	EEPD1	Q7L9B9	569 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	CTU1	Q7Z7A3	348 aa	Known RBP	13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	PPTC7	Q8NI37	304 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	SYMPK	Q92797	1274 aa	Known RBP	13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	TIGD1	Q96MW7	591 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	CLIC6	Q96NY7	704 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	UNC45A	Q9H3U1	944 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	MLXIP	Q9HAP2	919 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	MAGEF1	Q9HAY2	307 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	CCDC39	Q9UFE4	941 aa		13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.55	□□□□□ -0.24
HDLBP-215	ENST00000427487	GNE	Q9Y223	722 aa	Known RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms