RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 A0A1W2PRG0 241 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 FAM86B1E9PN63 330 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 KRT86O43790 486 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 IPO7O95373 1038 aaKnown RBP12.88□□□□□ -0.35
FIRRE-201ENST00000427391 MOCS3O95396 460 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 FAM86B2P0C5J1 330 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 ARHGAP4P98171 946 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 CCDC40Q4G0X9 1142 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 COBLL1Q53SF7 1204 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 ARSHQ5FYA8 562 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 PODNQ7Z5L7 613 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 RETREG2Q8NC44 543 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 CCDC17Q96LX7 622 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 PI4KBQ9UBF8 816 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 SALL4Q9UJQ4 1053 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 PLAGL2Q9UPG8 496 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 SAR1BQ9Y6B6 198 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 MYO3BQ8WXR4 1341 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 CYP11B2P19099 503 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 KIF11P52732 1056 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 ARID5AQ03989 594 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 SEMA3FQ13275 785 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 ZCWPW2Q504Y3 356 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 GSPT2Q8IYD1 628 aaKnown RBP12.88□□□□□ -0.35
FIRRE-201ENST00000427391 PRMT6Q96LA8 375 aaPredicted RBP12.88□□□□□ -0.35
FIRRE-201ENST00000427391 IFIH1Q9BYX4 1025 aaKnown RBP12.88□□□□□ -0.35
FIRRE-201ENST00000427391 EHD4Q9H223 541 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 IKZF4Q9H2S9 585 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 PDE11AQ9HCR9 933 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 KCNMB3Q9NPA1 279 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 JADE2Q9NQC1 790 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 EHD2Q9NZN4 543 aa12.88□□□□□ -0.35
FIRRE-201ENST00000427391 KRT18P05783 430 aaKnown RBP12.87□□□□□ -0.35
FIRRE-201ENST00000427391 CXCR5P32302 372 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 ECE1P42892 770 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 GFPT1Q06210 699 aaPredicted RBP12.87□□□□□ -0.35
FIRRE-201ENST00000427391 BRD3Q15059 726 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 ABCB5Q2M3G0 1257 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 SCFD1Q8WVM8 642 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 BAP1Q92560 729 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 TBC1D5Q92609 795 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 UBXN6Q9BZV1 441 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 DEF6Q9H4E7 631 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 QSER1Q2KHR3 1735 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 GREB1LQ9C091 1923 aaPredicted RBP12.87□□□□□ -0.35
FIRRE-201ENST00000427391 CLRN2A0PK11 232 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 AKR1B10O60218 316 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 VAV2P52735 878 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 UBXN2AP68543 259 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 LRRC63Q05C16 580 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 SPA17Q15506 151 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 KIAA1755Q5JYT7 1200 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 CATSPER3Q86XQ3 398 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 TSG101Q99816 390 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 NYAP2Q9P242 653 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 RAB21Q9UL25 225 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 PCDHA2Q9Y5H9 948 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 PCDHA13Q9Y5I0 950 aa12.87□□□□□ -0.35
FIRRE-201ENST00000427391 SLX4Q8IY92 1834 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 A0A1W2PQJ5 194 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 RSPH10B2B2RC85 870 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 OPLAHO14841 1288 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 NCK2O43639 380 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 RSPH10BP0C881 870 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 CHRM1P11229 460 aaPredicted RBP12.86□□□□□ -0.35
FIRRE-201ENST00000427391 POLD1P28340 1107 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 PPP1R2P41236 205 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 KIF5AQ12840 1032 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 CACNA2D4Q7Z3S7 1137 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 DNAAF5Q86Y56 855 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 CDAN1Q8IWY9 1227 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 CCDC170Q8IYT3 715 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 COL4A3BPQ9Y5P4 624 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 TCP10L2B9ZVM9 353 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 GCFC2P16383 781 aaKnown RBP12.86□□□□□ -0.35
FIRRE-201ENST00000427391 DNA2P51530 1060 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 SPIRE1Q08AE8 756 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 C2orf54Q08AI8 447 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 TDRD12Q587J7 1177 aaKnown RBP12.86□□□□□ -0.35
FIRRE-201ENST00000427391 FIGNQ5HY92 759 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 STRIP1Q5VSL9 837 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 NEK11Q8NG66 645 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 ETNPPLQ8TBG4 499 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 CAGE1Q8TC20 777 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 COG1Q8WTW3 980 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 MKL1Q969V6 931 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 LENG9Q96B70 501 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 L1RE1Q9UN81 338 aa12.86□□□□□ -0.35
FIRRE-201ENST00000427391 SCAF8Q9UPN6 1271 aaKnown RBP12.86□□□□□ -0.35
FIRRE-201ENST00000427391 FAM170AA1A519 330 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 SFI1A8K8P3 1242 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 MAP2K7O14733 419 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 BUB1O43683 1085 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 TLR2O60603 784 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 NOL4O94818 638 aa12.85□□□□□ -0.35
FIRRE-201ENST00000427391 POLR2FP61218 127 aaKnown RBP12.85□□□□□ -0.35
FIRRE-201ENST00000427391 FKBP3Q00688 224 aaKnown RBP12.85□□□□□ -0.35
FIRRE-201ENST00000427391 ZYXQ15942 572 aaKnown RBP12.85□□□□□ -0.35
FIRRE-201ENST00000427391 PAPD7Q5XG87 772 aaKnown RBP12.85□□□□□ -0.35
FIRRE-201ENST00000427391 FBXO11Q86XK2 927 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms