RNA–Protein interactions for RNA: ENST00000426431.2

SP1-202, Transcript of Sp1 transcription factor, humanhuman

TSL 1 (best) BASIC

Gene SP1, Length 7,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP1-202ENST00000426431 TSGA10IPQ3SY00 556 aa11.08□□□□□ -0.64
SP1-202ENST00000426431 HHIPL2Q6UWX4 724 aa11.08□□□□□ -0.64
SP1-202ENST00000426431 SH3RF3Q8TEJ3 882 aaPredicted RBP11.08□□□□□ -0.64
SP1-202ENST00000426431 GCNAQ96QF7 691 aa11.08□□□□□ -0.64
SP1-202ENST00000426431 RPF1Q9H9Y2 349 aaKnown RBP11.08□□□□□ -0.64
SP1-202ENST00000426431 PREX1Q8TCU6 1659 aa11.08□□□□□ -0.64
SP1-202ENST00000426431 USP42Q9H9J4 1324 aaKnown RBP11.08□□□□□ -0.64
SP1-202ENST00000426431 USP17L15C9J2P7 530 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 USP17L13C9JLJ4 530 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 USP17L11C9JVI0 530 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 USP17L18D6R9N7 530 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 USP17L22D6RA61 530 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 USP17L17D6RBQ6 530 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 USP17L19D6RCP7 530 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 USP17L20D6RJB6 530 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 USP11P51784 963 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 POLR2FP61218 127 aaKnown RBP11.07□□□□□ -0.64
SP1-202ENST00000426431 USP17L24Q0WX57 530 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 ZNF34Q8IZ26 560 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 NLRP7Q8WX94 980 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 CDKL2Q92772 493 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 ATP6V0A4Q9HBG4 840 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 KIDINS220Q9ULH0 1771 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 CIITAP33076 1130 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 STAMQ92783 540 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 GJA10Q969M2 543 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 CCDC127Q96BQ5 260 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 OGFRQ9NZT2 677 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 PCDHB4Q9Y5E5 795 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 SPATA31D1Q6ZQQ2 1576 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 PASKQ96RG2 1323 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 ADAMTS13Q76LX8 1427 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 RNASELQ05823 741 aaKnown RBP11.07□□□□□ -0.64
SP1-202ENST00000426431 HHATQ5VTY9 493 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 ZNF449Q6P9G9 518 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 EFCAB13Q8IY85 973 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 WRNIP1Q96S55 665 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 ACAD9Q9H845 621 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 PCDHA5Q9Y5H7 936 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 AP3M2P53677 418 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 IGBP1P78318 339 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 PLCB4Q15147 1175 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 PROCA1Q8NCQ7 364 aaPredicted RBP11.07□□□□□ -0.64
SP1-202ENST00000426431 AFAP1L1Q8TED9 768 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 GOLGA8QA0A0J9YX86 632 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 GOLGA8OA6NCC3 632 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 GOLGA8NF8WBI6 632 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 K7ERI5 159 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 PPFIA4O75335 1185 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 GARSP41250 739 aaKnown RBP11.07□□□□□ -0.64
SP1-202ENST00000426431 PRELPP51888 382 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 UAP1Q16222 522 aaPredicted RBP11.07□□□□□ -0.64
SP1-202ENST00000426431 SBK1Q52WX2 424 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 PRPF31Q8WWY3 499 aaKnown RBP11.07□□□□□ -0.64
SP1-202ENST00000426431 DDX23Q9BUQ8 820 aaKnown RBP11.07□□□□□ -0.64
SP1-202ENST00000426431 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.07□□□□□ -0.64
SP1-202ENST00000426431 DIP2BQ9P265 1576 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 MYO3AQ8NEV4 1616 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 PVALEFA0A1B0GWK0 134 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 PSMC4P43686 418 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 KIAA1841Q6NSI8 718 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 SGMS1Q86VZ5 419 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 MB21D1Q8N884 522 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 EMILIN3Q9NT22 766 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 SLC8A2Q9UPR5 921 aa11.07□□□□□ -0.64
SP1-202ENST00000426431 EPN1Q9Y6I3 576 aaPredicted RBP11.07□□□□□ -0.64
SP1-202ENST00000426431 JRKLQ9Y4A0 524 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 ANXA13P27216 316 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 CASC4Q6P4E1 433 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 TMEM47Q9BQJ4 181 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 TRIM62Q9BVG3 475 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 CCDC68Q9H2F9 335 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 RNF181Q9P0P0 153 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 MXI1P50539 228 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 MTMR1Q13613 665 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 RMDN3Q96TC7 470 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 CELF1Q92879 486 aaKnown RBP11.06□□□□□ -0.64
SP1-202ENST00000426431 DISC1Q9NRI5 854 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 LRMPQ12912 555 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 UNC13DQ70J99 1090 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 PALM2Q8IXS6 379 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 DYNLL2Q96FJ2 89 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 TMEM63CQ9P1W3 806 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 ZHX2Q9Y6X8 837 aa11.06□□□□□ -0.64
SP1-202ENST00000426431 SLC16A2P36021 539 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 KRT12Q99456 494 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 PCDHA6Q9UN73 950 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 PCDHA8Q9Y5H6 950 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 KRIT1O00522 736 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 FCER1AP12319 257 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 SMARCA1P28370 1054 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 BFSP1Q12934 665 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 FAM182BQ5T319 152 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 XRRA1Q6P2D8 792 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 RSRC2Q7L4I2 434 aaKnown RBP11.05□□□□□ -0.64
SP1-202ENST00000426431 FANCLQ9NW38 375 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 SCINQ9Y6U3 715 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.05□□□□□ -0.64
SP1-202ENST00000426431 MAP3K14Q99558 947 aa11.05□□□□□ -0.64
SP1-202ENST00000426431 PPANQ9NQ55 473 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms