RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 GPR20Q99678 358 aa21.11■□□□□ 0.97
MSH5-207ENST00000425703 MXRA8Q9BRK3 442 aa21.11■□□□□ 0.97
MSH5-207ENST00000425703 WNT8AQ9H1J5 351 aa21.11■□□□□ 0.97
MSH5-207ENST00000425703 BCAS3Q9H6U6 928 aa21.11■□□□□ 0.97
MSH5-207ENST00000425703 IL23AQ9NPF7 189 aa21.11■□□□□ 0.97
MSH5-207ENST00000425703 NOD1Q9Y239 953 aa21.11■□□□□ 0.97
MSH5-207ENST00000425703 UMODL1Q5DID0 1318 aa21.1■□□□□ 0.97
MSH5-207ENST00000425703 SORBS3O60504 671 aa21.1■□□□□ 0.97
MSH5-207ENST00000425703 LGALS2P05162 132 aa21.1■□□□□ 0.97
MSH5-207ENST00000425703 BFSP2Q13515 415 aa21.1■□□□□ 0.97
MSH5-207ENST00000425703 CEP55Q53EZ4 464 aa21.1■□□□□ 0.97
MSH5-207ENST00000425703 C16orf59Q7L2K0 433 aa21.1■□□□□ 0.97
MSH5-207ENST00000425703 REXO1Q8N1G1 1221 aaKnown RBP21.1■□□□□ 0.97
MSH5-207ENST00000425703 CAGE1Q8TC20 777 aa21.1■□□□□ 0.97
MSH5-207ENST00000425703 H3BRB1 525 aa21.09■□□□□ 0.97
MSH5-207ENST00000425703 ATP9AO75110 1047 aa21.09■□□□□ 0.97
MSH5-207ENST00000425703 DEXIO95424 95 aa21.09■□□□□ 0.97
MSH5-207ENST00000425703 CHMP4BP1P59074 171 aa21.09■□□□□ 0.97
MSH5-207ENST00000425703 SSRP1Q08945 709 aaKnown RBP21.09■□□□□ 0.97
MSH5-207ENST00000425703 TMEM240Q5SV17 173 aa21.09■□□□□ 0.97
MSH5-207ENST00000425703 GDF6Q6KF10 455 aaPredicted RBP21.09■□□□□ 0.97
MSH5-207ENST00000425703 NIPA1Q7RTP0 329 aa21.09■□□□□ 0.97
MSH5-207ENST00000425703 RPUSD2Q8IZ73 545 aaKnown RBP21.09■□□□□ 0.97
MSH5-207ENST00000425703 CCDC155Q8N6L0 562 aa21.09■□□□□ 0.97
MSH5-207ENST00000425703 CRYGNQ8WXF5 182 aa21.09■□□□□ 0.97
MSH5-207ENST00000425703 CTAGE1Q96RT6 745 aa21.09■□□□□ 0.97
MSH5-207ENST00000425703 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.09■□□□□ 0.972e-8■■□□□ 13.1
MSH5-207ENST00000425703 ALG1Q9BT22 464 aa21.09■□□□□ 0.97
MSH5-207ENST00000425703 TUT1Q9H6E5 874 aaKnown RBP21.09■□□□□ 0.97
MSH5-207ENST00000425703 KCNH7Q9NS40 1196 aa21.09■□□□□ 0.97
MSH5-207ENST00000425703 TMEM260Q9NX78 707 aa21.09■□□□□ 0.97
MSH5-207ENST00000425703 HDAC6Q9UBN7 1215 aa21.09■□□□□ 0.97
MSH5-207ENST00000425703 MEIS1O00470 390 aa21.08■□□□□ 0.97
MSH5-207ENST00000425703 CDKL5O76039 1030 aa21.08■□□□□ 0.97
MSH5-207ENST00000425703 PFKMP08237 780 aa21.08■□□□□ 0.97
MSH5-207ENST00000425703 CYP3A4P08684 503 aa21.08■□□□□ 0.97
MSH5-207ENST00000425703 RFC2P35250 354 aa21.08■□□□□ 0.97
MSH5-207ENST00000425703 CCL23P55773 120 aa21.08■□□□□ 0.97
MSH5-207ENST00000425703 SMAD3P84022 425 aaKnown RBP21.08■□□□□ 0.97
MSH5-207ENST00000425703 ARHGAP4P98171 946 aa21.08■□□□□ 0.97
MSH5-207ENST00000425703 RBL2Q08999 1139 aa21.08■□□□□ 0.97
MSH5-207ENST00000425703 RASIP1Q5U651 963 aa21.08■□□□□ 0.97
MSH5-207ENST00000425703 FAM109BQ6ICB4 259 aaPredicted RBP21.08■□□□□ 0.97
MSH5-207ENST00000425703 PGBD1Q96JS3 809 aa21.08■□□□□ 0.97
MSH5-207ENST00000425703 ZNF215Q9UL58 517 aaPredicted RBP21.08■□□□□ 0.97
MSH5-207ENST00000425703 PFKFB2O60825 505 aa21.07■□□□□ 0.96
MSH5-207ENST00000425703 HOXC8P31273 242 aa21.07■□□□□ 0.96
MSH5-207ENST00000425703 JAKMIP3Q5VZ66 844 aa21.07■□□□□ 0.96
MSH5-207ENST00000425703 RETREG2Q8NC44 543 aa21.07■□□□□ 0.96
MSH5-207ENST00000425703 AFAP1L1Q8TED9 768 aa21.07■□□□□ 0.96
MSH5-207ENST00000425703 PPP1R13LQ8WUF5 828 aa21.07■□□□□ 0.96
MSH5-207ENST00000425703 LARP6Q9BRS8 491 aaKnown RBP21.07■□□□□ 0.96
MSH5-207ENST00000425703 SLKQ9H2G2 1235 aaPredicted RBP21.07■□□□□ 0.96
MSH5-207ENST00000425703 TPCN1Q9ULQ1 816 aa21.07■□□□□ 0.96
MSH5-207ENST00000425703 NFASCO94856 1347 aa21.06■□□□□ 0.96
MSH5-207ENST00000425703 SEC24BO95487 1268 aa21.06■□□□□ 0.96
MSH5-207ENST00000425703 STK3Q13188 491 aa21.06■□□□□ 0.96
MSH5-207ENST00000425703 PTK7Q13308 1070 aa21.06■□□□□ 0.96
MSH5-207ENST00000425703 ZNF365Q70YC5 407 aa21.06■□□□□ 0.96
MSH5-207ENST00000425703 CYP2W1Q8TAV3 490 aa21.06■□□□□ 0.96
MSH5-207ENST00000425703 SEPT1Q8WYJ6 367 aa21.06■□□□□ 0.96
MSH5-207ENST00000425703 HERVK_113Q902F9 699 aa21.06■□□□□ 0.96
MSH5-207ENST00000425703 MTIF3Q9H2K0 278 aaKnown RBP21.06■□□□□ 0.96
MSH5-207ENST00000425703 JPH1Q9HDC5 661 aaPredicted RBP21.06■□□□□ 0.96
MSH5-207ENST00000425703 VPS54Q9P1Q0 977 aa21.06■□□□□ 0.96
MSH5-207ENST00000425703 MYH7BA7E2Y1 1941 aa21.06■□□□□ 0.96
MSH5-207ENST00000425703 PPFIA3O75145 1194 aa21.05■□□□□ 0.96
MSH5-207ENST00000425703 PARNO95453 639 aaKnown RBP21.05■□□□□ 0.96
MSH5-207ENST00000425703 FGBP02675 491 aa21.05■□□□□ 0.96
MSH5-207ENST00000425703 IQCF3P0C7M6 154 aa21.05■□□□□ 0.96
MSH5-207ENST00000425703 ACRP10323 421 aa21.05■□□□□ 0.96
MSH5-207ENST00000425703 TCF7P36402 384 aaPredicted RBP21.05■□□□□ 0.96
MSH5-207ENST00000425703 ZNF76P36508 570 aa21.05■□□□□ 0.96
MSH5-207ENST00000425703 AK2P54819 239 aa21.05■□□□□ 0.96
MSH5-207ENST00000425703 SCRN1Q12765 414 aa21.05■□□□□ 0.96
MSH5-207ENST00000425703 GALNT17Q6IS24 598 aa21.05■□□□□ 0.96
MSH5-207ENST00000425703 SCLYQ96I15 445 aa21.05■□□□□ 0.96
MSH5-207ENST00000425703 SDF4Q9BRK5 362 aa21.05■□□□□ 0.96
MSH5-207ENST00000425703 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.04■□□□□ 0.96
MSH5-207ENST00000425703 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.04■□□□□ 0.96
MSH5-207ENST00000425703 SP4Q02446 784 aa21.04■□□□□ 0.96
MSH5-207ENST00000425703 VWCEQ96DN2 955 aa21.04■□□□□ 0.96
MSH5-207ENST00000425703 C22orf23Q9BZE7 217 aa21.04■□□□□ 0.96
MSH5-207ENST00000425703 AGO4Q9HCK5 861 aaKnown RBP21.04■□□□□ 0.96
MSH5-207ENST00000425703 SLC9A2Q9UBY0 812 aa21.04■□□□□ 0.96
MSH5-207ENST00000425703 STK36Q9NRP7 1315 aa21.04■□□□□ 0.96
MSH5-207ENST00000425703 IGLV3-22A0A075B6J6 115 aa21.03■□□□□ 0.96
MSH5-207ENST00000425703 GSTTP1A0A1W2PQM5 241 aa21.03■□□□□ 0.96
MSH5-207ENST00000425703 C17orf102A2RUQ5 167 aa21.03■□□□□ 0.96
MSH5-207ENST00000425703 FAM86B1E9PN63 330 aa21.03■□□□□ 0.96
MSH5-207ENST00000425703 FAM86B2P0C5J1 330 aa21.03■□□□□ 0.96
MSH5-207ENST00000425703 SMIM10L2AP0DMW4 78 aa21.03■□□□□ 0.96
MSH5-207ENST00000425703 SMIM10L2BP0DMW5 78 aa21.03■□□□□ 0.96
MSH5-207ENST00000425703 ARP10275 920 aa21.03■□□□□ 0.96
MSH5-207ENST00000425703 GNAT1P11488 350 aa21.03■□□□□ 0.96
MSH5-207ENST00000425703 SELPP16109 830 aa21.03■□□□□ 0.96
MSH5-207ENST00000425703 CIITAP33076 1130 aa21.03■□□□□ 0.96
MSH5-207ENST00000425703 NLRP5P59047 1200 aa21.03■□□□□ 0.96
MSH5-207ENST00000425703 SETQ01105 290 aaPredicted RBP21.03■□□□□ 0.96
MSH5-207ENST00000425703 C8orf34Q49A92 452 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms