RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 MFSD10Q14728 455 aa20.47■□□□□ 0.87
IGHV3-47-201ENST00000425060 KIAA0753Q2KHM9 967 aa20.47■□□□□ 0.87
IGHV3-47-201ENST00000425060 JAKMIP3Q5VZ66 844 aa20.47■□□□□ 0.87
IGHV3-47-201ENST00000425060 TMEM199Q8N511 208 aa20.47■□□□□ 0.87
IGHV3-47-201ENST00000425060 GIMAP8Q8ND71 665 aaPredicted RBP20.47■□□□□ 0.87
IGHV3-47-201ENST00000425060 KATNAL1Q9BW62 490 aa20.47■□□□□ 0.87
IGHV3-47-201ENST00000425060 WNT8AQ9H1J5 351 aa20.47■□□□□ 0.87
IGHV3-47-201ENST00000425060 SH3GLB2Q9NR46 395 aa20.47■□□□□ 0.87
IGHV3-47-201ENST00000425060 HDAC6Q9UBN7 1215 aa20.47■□□□□ 0.87
IGHV3-47-201ENST00000425060 GTF2IRD1Q9UHL9 959 aa20.47■□□□□ 0.87
IGHV3-47-201ENST00000425060 DOCK5Q9H7D0 1870 aa20.47■□□□□ 0.87
IGHV3-47-201ENST00000425060 CPLX1O14810 134 aa20.46■□□□□ 0.87
IGHV3-47-201ENST00000425060 LGALS2P05162 132 aa20.46■□□□□ 0.87
IGHV3-47-201ENST00000425060 GNA11P29992 359 aa20.46■□□□□ 0.87
IGHV3-47-201ENST00000425060 PPIGQ13427 754 aaKnown RBP eCLIP20.46■□□□□ 0.87
IGHV3-47-201ENST00000425060 MTMR1Q13613 665 aa20.46■□□□□ 0.87
IGHV3-47-201ENST00000425060 CEP55Q53EZ4 464 aa20.46■□□□□ 0.87
IGHV3-47-201ENST00000425060 GDF6Q6KF10 455 aaPredicted RBP20.46■□□□□ 0.87
IGHV3-47-201ENST00000425060 VWCEQ96DN2 955 aa20.46■□□□□ 0.87
IGHV3-47-201ENST00000425060 ALG1Q9BT22 464 aa20.46■□□□□ 0.87
IGHV3-47-201ENST00000425060 KCNH7Q9NS40 1196 aa20.46■□□□□ 0.87
IGHV3-47-201ENST00000425060 VPS54Q9P1Q0 977 aa20.46■□□□□ 0.87
IGHV3-47-201ENST00000425060 SZT2Q5T011 3432 aa20.46■□□□□ 0.87
IGHV3-47-201ENST00000425060 MEIS1O00470 390 aa20.45■□□□□ 0.86
IGHV3-47-201ENST00000425060 DEXIO95424 95 aa20.45■□□□□ 0.86
IGHV3-47-201ENST00000425060 CYP3A4P08684 503 aa20.45■□□□□ 0.86
IGHV3-47-201ENST00000425060 CHMP4BP1P59074 171 aa20.45■□□□□ 0.86
IGHV3-47-201ENST00000425060 ARHGAP4P98171 946 aa20.45■□□□□ 0.86
IGHV3-47-201ENST00000425060 ANKRD1Q15327 319 aa20.45■□□□□ 0.86
IGHV3-47-201ENST00000425060 MCTP2Q6DN12 878 aa20.45■□□□□ 0.86
IGHV3-47-201ENST00000425060 TRIM22Q8IYM9 498 aa20.45■□□□□ 0.86
IGHV3-47-201ENST00000425060 REXO1Q8N1G1 1221 aaKnown RBP20.45■□□□□ 0.86
IGHV3-47-201ENST00000425060 CCDC148Q8NFR7 591 aa20.45■□□□□ 0.86
IGHV3-47-201ENST00000425060 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.45■□□□□ 0.86
IGHV3-47-201ENST00000425060 SLKQ9H2G2 1235 aaPredicted RBP20.45■□□□□ 0.86
IGHV3-47-201ENST00000425060 H3BRB1 525 aa20.44■□□□□ 0.86
IGHV3-47-201ENST00000425060 NOP56O00567 594 aaKnown RBP20.44■□□□□ 0.86
IGHV3-47-201ENST00000425060 EDIL3O43854 480 aa20.44■□□□□ 0.86
IGHV3-47-201ENST00000425060 ARP10275 920 aa20.44■□□□□ 0.86
IGHV3-47-201ENST00000425060 CCL23P55773 120 aa20.44■□□□□ 0.86
IGHV3-47-201ENST00000425060 HIC1Q14526 733 aa20.44■□□□□ 0.86
IGHV3-47-201ENST00000425060 PTGISQ16647 500 aa20.44■□□□□ 0.86
IGHV3-47-201ENST00000425060 TMEM240Q5SV17 173 aa20.44■□□□□ 0.86
IGHV3-47-201ENST00000425060 GPR153Q6NV75 609 aa20.44■□□□□ 0.86
IGHV3-47-201ENST00000425060 CPLX2Q6PUV4 134 aaKnown RBP20.44■□□□□ 0.86
IGHV3-47-201ENST00000425060 C7orf31Q8N865 590 aa20.44■□□□□ 0.86
IGHV3-47-201ENST00000425060 TUT1Q9H6E5 874 aaKnown RBP20.44■□□□□ 0.86
IGHV3-47-201ENST00000425060 IL23AQ9NPF7 189 aa20.44■□□□□ 0.86
IGHV3-47-201ENST00000425060 GSTTP1A0A1W2PQM5 241 aa20.43■□□□□ 0.86
IGHV3-47-201ENST00000425060 FAM86B1E9PN63 330 aa20.43■□□□□ 0.86
IGHV3-47-201ENST00000425060 CTDNEP1O95476 244 aa20.43■□□□□ 0.86
IGHV3-47-201ENST00000425060 FAM86B2P0C5J1 330 aa20.43■□□□□ 0.86
IGHV3-47-201ENST00000425060 ACRP10323 421 aa20.43■□□□□ 0.86
IGHV3-47-201ENST00000425060 HOXC8P31273 242 aa20.43■□□□□ 0.86
IGHV3-47-201ENST00000425060 NEK4P51957 841 aa20.43■□□□□ 0.86
IGHV3-47-201ENST00000425060 ME3Q16798 604 aa20.43■□□□□ 0.86
IGHV3-47-201ENST00000425060 RASIP1Q5U651 963 aa20.43■□□□□ 0.86
IGHV3-47-201ENST00000425060 NIPA1Q7RTP0 329 aa20.43■□□□□ 0.86
IGHV3-47-201ENST00000425060 FAM177A1Q8N128 213 aaPredicted RBP20.43■□□□□ 0.86
IGHV3-47-201ENST00000425060 BICD2Q8TD16 824 aa20.43■□□□□ 0.86
IGHV3-47-201ENST00000425060 RASGRP4Q8TDF6 673 aa20.43■□□□□ 0.86
IGHV3-47-201ENST00000425060 DHX38Q92620 1227 aaKnown RBP20.43■□□□□ 0.86
IGHV3-47-201ENST00000425060 AIFM3Q96NN9 605 aa20.43■□□□□ 0.86
IGHV3-47-201ENST00000425060 IGLV3-22A0A075B6J6 115 aa20.42■□□□□ 0.86
IGHV3-47-201ENST00000425060 PITPNM1O00562 1244 aa20.42■□□□□ 0.86
IGHV3-47-201ENST00000425060 NPY5RQ15761 445 aa20.42■□□□□ 0.86
IGHV3-47-201ENST00000425060 SEPT1Q8WYJ6 367 aa20.42■□□□□ 0.86
IGHV3-47-201ENST00000425060 SCLYQ96I15 445 aa20.42■□□□□ 0.86
IGHV3-47-201ENST00000425060 KIF2CQ99661 725 aa20.42■□□□□ 0.86
IGHV3-47-201ENST00000425060 AGO4Q9HCK5 861 aaKnown RBP20.42■□□□□ 0.86
IGHV3-47-201ENST00000425060 PKD2L1Q9P0L9 805 aa20.42■□□□□ 0.86
IGHV3-47-201ENST00000425060 NFASCO94856 1347 aa20.42■□□□□ 0.86
IGHV3-47-201ENST00000425060 M0R2N6 131 aa20.41■□□□□ 0.86
IGHV3-47-201ENST00000425060 CDKL5O76039 1030 aa20.41■□□□□ 0.86
IGHV3-47-201ENST00000425060 LARGE1O95461 756 aa20.41■□□□□ 0.86
IGHV3-47-201ENST00000425060 CIITAP33076 1130 aa20.41■□□□□ 0.86
IGHV3-47-201ENST00000425060 NLRP5P59047 1200 aa20.41■□□□□ 0.86
IGHV3-47-201ENST00000425060 ZNF200P98182 395 aaPredicted RBP20.41■□□□□ 0.86
IGHV3-47-201ENST00000425060 SP4Q02446 784 aa20.41■□□□□ 0.86
IGHV3-47-201ENST00000425060 RBL2Q08999 1139 aa20.41■□□□□ 0.86
IGHV3-47-201ENST00000425060 ITGB3BPQ13352 177 aaPredicted RBP20.41■□□□□ 0.86
IGHV3-47-201ENST00000425060 ZNF365Q70YC5 407 aa20.41■□□□□ 0.86
IGHV3-47-201ENST00000425060 TRIM50Q86XT4 487 aa20.41■□□□□ 0.86
IGHV3-47-201ENST00000425060 RNPC3Q96LT9 517 aaKnown RBP20.41■□□□□ 0.86
IGHV3-47-201ENST00000425060 PCDHA4Q9UN74 947 aa20.41■□□□□ 0.86
IGHV3-47-201ENST00000425060 NOD1Q9Y239 953 aa20.41■□□□□ 0.86
IGHV3-47-201ENST00000425060 STK36Q9NRP7 1315 aa20.41■□□□□ 0.86
IGHV3-47-201ENST00000425060 IQCF3P0C7M6 154 aa20.4■□□□□ 0.86
IGHV3-47-201ENST00000425060 TCF7P36402 384 aaPredicted RBP20.4■□□□□ 0.86
IGHV3-47-201ENST00000425060 BFSP2Q13515 415 aa20.4■□□□□ 0.86
IGHV3-47-201ENST00000425060 TRIM71Q2Q1W2 868 aaKnown RBP20.4■□□□□ 0.86
IGHV3-47-201ENST00000425060 UTP14CQ5TAP6 766 aaKnown RBP20.4■□□□□ 0.86
IGHV3-47-201ENST00000425060 PSRC1Q6PGN9 363 aaPredicted RBP20.4■□□□□ 0.86
IGHV3-47-201ENST00000425060 DAGLBQ8NCG7 672 aa20.4■□□□□ 0.86
IGHV3-47-201ENST00000425060 CAGE1Q8TC20 777 aa20.4■□□□□ 0.86
IGHV3-47-201ENST00000425060 RNPEPQ9H4A4 650 aa20.4■□□□□ 0.86
IGHV3-47-201ENST00000425060 JPH1Q9HDC5 661 aaPredicted RBP20.4■□□□□ 0.86
IGHV3-47-201ENST00000425060 SLC9A2Q9UBY0 812 aa20.4■□□□□ 0.86
IGHV3-47-201ENST00000425060 DHX15O43143 795 aaKnown RBP20.39■□□□□ 0.85
IGHV3-47-201ENST00000425060 DTNBO60941 627 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms