RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 KCNA2P16389 499 aa25.48■■□□□ 1.67
PTCHD3P2-201ENST00000424937 GIMAP8Q8ND71 665 aaPredicted RBP25.48■■□□□ 1.67
PTCHD3P2-201ENST00000424937 KIF2CQ99661 725 aa25.48■■□□□ 1.67
PTCHD3P2-201ENST00000424937 UPF2Q9HAU5 1272 aaKnown RBP25.48■■□□□ 1.67
PTCHD3P2-201ENST00000424937 TANC1Q9C0D5 1861 aa25.48■■□□□ 1.67
PTCHD3P2-201ENST00000424937 KAT6AQ92794 2004 aa25.47■■□□□ 1.67
PTCHD3P2-201ENST00000424937 ATP9AO75110 1047 aa25.47■■□□□ 1.67
PTCHD3P2-201ENST00000424937 PPFIA4O75335 1185 aa25.47■■□□□ 1.67
PTCHD3P2-201ENST00000424937 CTDNEP1O95476 244 aa25.47■■□□□ 1.67
PTCHD3P2-201ENST00000424937 ZNF76P36508 570 aa25.47■■□□□ 1.67
PTCHD3P2-201ENST00000424937 RBM25P49756 843 aaKnown RBP25.47■■□□□ 1.67
PTCHD3P2-201ENST00000424937 PSEN2P49810 448 aa25.47■■□□□ 1.67
PTCHD3P2-201ENST00000424937 CEP55Q53EZ4 464 aa25.47■■□□□ 1.67
PTCHD3P2-201ENST00000424937 CYP2W1Q8TAV3 490 aa25.47■■□□□ 1.67
PTCHD3P2-201ENST00000424937 ALG1Q9BT22 464 aa25.47■■□□□ 1.67
PTCHD3P2-201ENST00000424937 TIMP1P01033 207 aa25.46■■□□□ 1.67
PTCHD3P2-201ENST00000424937 PTPN11Q06124 597 aaPredicted RBP25.46■■□□□ 1.67
PTCHD3P2-201ENST00000424937 MFSD10Q14728 455 aa25.46■■□□□ 1.67
PTCHD3P2-201ENST00000424937 TDHQ8IZJ6 230 aa25.46■■□□□ 1.67
PTCHD3P2-201ENST00000424937 GPR20Q99678 358 aa25.46■■□□□ 1.67
PTCHD3P2-201ENST00000424937 TELO2Q9Y4R8 837 aa25.46■■□□□ 1.67
PTCHD3P2-201ENST00000424937 GTF3C3Q9Y5Q9 886 aa25.46■■□□□ 1.67
PTCHD3P2-201ENST00000424937 LGALS2P05162 132 aa25.45■■□□□ 1.66
PTCHD3P2-201ENST00000424937 KIAA0753Q2KHM9 967 aa25.45■■□□□ 1.66
PTCHD3P2-201ENST00000424937 HIPK3Q9H422 1215 aa25.45■■□□□ 1.66
PTCHD3P2-201ENST00000424937 KCNH7Q9NS40 1196 aa25.45■■□□□ 1.66
PTCHD3P2-201ENST00000424937 ORC3Q9UBD5 711 aaPredicted RBP25.45■■□□□ 1.66
PTCHD3P2-201ENST00000424937 PCDHA4Q9UN74 947 aa25.45■■□□□ 1.66
PTCHD3P2-201ENST00000424937 SCN5AQ14524 2016 aa25.44■■□□□ 1.66
PTCHD3P2-201ENST00000424937 MAFGO15525 162 aa25.44■■□□□ 1.66
PTCHD3P2-201ENST00000424937 SUPT20HL2P0C7V6 817 aa25.44■■□□□ 1.66
PTCHD3P2-201ENST00000424937 ARP10275 920 aa25.44■■□□□ 1.66
PTCHD3P2-201ENST00000424937 CYP2C9P11712 490 aa25.44■■□□□ 1.66
PTCHD3P2-201ENST00000424937 FPGSQ05932 587 aa25.44■■□□□ 1.66
PTCHD3P2-201ENST00000424937 CRYGNQ8WXF5 182 aa25.44■■□□□ 1.66
PTCHD3P2-201ENST00000424937 C16orf70Q9BSU1 422 aa25.44■■□□□ 1.66
PTCHD3P2-201ENST00000424937 NOD1Q9Y239 953 aa25.44■■□□□ 1.66
PTCHD3P2-201ENST00000424937 UMODL1Q5DID0 1318 aa25.43■■□□□ 1.66
PTCHD3P2-201ENST00000424937 FAM86B1E9PN63 330 aa25.43■■□□□ 1.66
PTCHD3P2-201ENST00000424937 HAS3O00219 553 aa25.43■■□□□ 1.66
PTCHD3P2-201ENST00000424937 CYP3A4P08684 503 aa25.43■■□□□ 1.66
PTCHD3P2-201ENST00000424937 FAM86B2P0C5J1 330 aa25.43■■□□□ 1.66
PTCHD3P2-201ENST00000424937 CYP2C18P33260 490 aa25.43■■□□□ 1.66
PTCHD3P2-201ENST00000424937 SESTD1Q86VW0 696 aa25.43■■□□□ 1.66
PTCHD3P2-201ENST00000424937 TRIM50Q86XT4 487 aa25.43■■□□□ 1.66
PTCHD3P2-201ENST00000424937 BLIDQ8IZY5 108 aa25.43■■□□□ 1.66
PTCHD3P2-201ENST00000424937 FAM177A1Q8N128 213 aaPredicted RBP25.43■■□□□ 1.66
PTCHD3P2-201ENST00000424937 C7orf31Q8N865 590 aa25.43■■□□□ 1.66
PTCHD3P2-201ENST00000424937 NOC4LQ9BVI4 516 aaKnown RBP25.43■■□□□ 1.66
PTCHD3P2-201ENST00000424937 HDAC6Q9UBN7 1215 aa25.43■■□□□ 1.66
PTCHD3P2-201ENST00000424937 KCNJ14Q9UNX9 436 aa25.43■■□□□ 1.66
PTCHD3P2-201ENST00000424937 LIMCH1Q9UPQ0 1083 aa25.43■■□□□ 1.66
PTCHD3P2-201ENST00000424937 WDR81Q562E7 1941 aa25.42■■□□□ 1.66
PTCHD3P2-201ENST00000424937 MEIS1O00470 390 aa25.42■■□□□ 1.66
PTCHD3P2-201ENST00000424937 XBP1P17861 261 aa25.42■■□□□ 1.66
PTCHD3P2-201ENST00000424937 UTP14CQ5TAP6 766 aaKnown RBP25.42■■□□□ 1.66
PTCHD3P2-201ENST00000424937 GDF6Q6KF10 455 aaPredicted RBP25.42■■□□□ 1.66
PTCHD3P2-201ENST00000424937 MFSD5Q6N075 450 aa25.42■■□□□ 1.66
PTCHD3P2-201ENST00000424937 NIPA1Q7RTP0 329 aa25.42■■□□□ 1.66
PTCHD3P2-201ENST00000424937 PLA2G4DQ86XP0 818 aa25.42■■□□□ 1.66
PTCHD3P2-201ENST00000424937 DAGLBQ8NCG7 672 aa25.42■■□□□ 1.66
PTCHD3P2-201ENST00000424937 NSUN7Q8NE18 718 aaKnown RBP25.42■■□□□ 1.66
PTCHD3P2-201ENST00000424937 WASF1Q92558 559 aa25.42■■□□□ 1.66
PTCHD3P2-201ENST00000424937 SDF4Q9BRK5 362 aa25.42■■□□□ 1.66
PTCHD3P2-201ENST00000424937 AGO4Q9HCK5 861 aaKnown RBP25.42■■□□□ 1.66
PTCHD3P2-201ENST00000424937 JPH1Q9HDC5 661 aaPredicted RBP25.42■■□□□ 1.66
PTCHD3P2-201ENST00000424937 GTF2IRD1Q9UHL9 959 aa25.42■■□□□ 1.66
PTCHD3P2-201ENST00000424937 H3BRB1 525 aa25.41■■□□□ 1.66
PTCHD3P2-201ENST00000424937 TCF7P36402 384 aaPredicted RBP25.41■■□□□ 1.66
PTCHD3P2-201ENST00000424937 ST3GAL1Q11201 340 aa25.41■■□□□ 1.66
PTCHD3P2-201ENST00000424937 NPY5RQ15761 445 aa25.41■■□□□ 1.66
PTCHD3P2-201ENST00000424937 PTGISQ16647 500 aa25.41■■□□□ 1.66
PTCHD3P2-201ENST00000424937 GALNT17Q6IS24 598 aa25.41■■□□□ 1.66
PTCHD3P2-201ENST00000424937 TUT1Q9H6E5 874 aaKnown RBP25.41■■□□□ 1.66
PTCHD3P2-201ENST00000424937 GJB4Q9NTQ9 266 aa25.41■■□□□ 1.66
PTCHD3P2-201ENST00000424937 ZNF215Q9UL58 517 aaPredicted RBP25.41■■□□□ 1.66
PTCHD3P2-201ENST00000424937 NFASCO94856 1347 aa25.4■■□□□ 1.66
PTCHD3P2-201ENST00000424937 IGLV3-22A0A075B6J6 115 aa25.4■■□□□ 1.66
PTCHD3P2-201ENST00000424937 JAK2O60674 1132 aa25.4■■□□□ 1.66
PTCHD3P2-201ENST00000424937 FXR1P51114 621 aaKnown RBP eCLIP25.4■■□□□ 1.66
PTCHD3P2-201ENST00000424937 EPHB4P54760 987 aa25.4■■□□□ 1.66
PTCHD3P2-201ENST00000424937 SETQ01105 290 aaPredicted RBP25.4■■□□□ 1.66
PTCHD3P2-201ENST00000424937 RABEP1Q15276 862 aa25.4■■□□□ 1.66
PTCHD3P2-201ENST00000424937 TMEM199Q8N511 208 aa25.4■■□□□ 1.66
PTCHD3P2-201ENST00000424937 PHF20Q9BVI0 1012 aa25.4■■□□□ 1.66
PTCHD3P2-201ENST00000424937 SLC9A2Q9UBY0 812 aa25.4■■□□□ 1.66
PTCHD3P2-201ENST00000424937 MYH9P35579 1960 aaKnown RBP25.4■■□□□ 1.66
PTCHD3P2-201ENST00000424937 FDPSP14324 419 aaKnown RBP25.39■■□□□ 1.66
PTCHD3P2-201ENST00000424937 CSF2RAP15509 400 aa25.39■■□□□ 1.66
PTCHD3P2-201ENST00000424937 CCL23P55773 120 aa25.39■■□□□ 1.66
PTCHD3P2-201ENST00000424937 ITGB3BPQ13352 177 aaPredicted RBP25.39■■□□□ 1.66
PTCHD3P2-201ENST00000424937 PPIGQ13427 754 aaKnown RBP eCLIP25.39■■□□□ 1.66
PTCHD3P2-201ENST00000424937 C9orf50Q5SZB4 431 aa25.39■■□□□ 1.66
PTCHD3P2-201ENST00000424937 CCDC83Q8IWF9 413 aa25.39■■□□□ 1.66
PTCHD3P2-201ENST00000424937 TBCKQ8TEA7 893 aa25.39■■□□□ 1.66
PTCHD3P2-201ENST00000424937 SEPT1Q8WYJ6 367 aa25.39■■□□□ 1.66
PTCHD3P2-201ENST00000424937 WNT8AQ9H1J5 351 aa25.39■■□□□ 1.66
PTCHD3P2-201ENST00000424937 GSTTP1A0A1W2PQM5 241 aa25.38■■□□□ 1.65
PTCHD3P2-201ENST00000424937 M0R2N6 131 aa25.38■■□□□ 1.65
PTCHD3P2-201ENST00000424937 DDX39AO00148 427 aaKnown RBP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms