RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 INTUQ9ULD6 942 aa16.75■□□□□ 0.27
C9orf3-204ENST00000424143 CCDC188H7C350 402 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 PALMO75781 387 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 GFPT2O94808 682 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 SNHG28P0DPA3 235 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 NR1D1P20393 614 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 MDH1P40925 334 aaKnown RBP16.74■□□□□ 0.27
C9orf3-204ENST00000424143 TXKP42681 527 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 CDK8P49336 464 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 NAP1L1P55209 391 aaKnown RBP16.74■□□□□ 0.27
C9orf3-204ENST00000424143 BIRC3Q13489 604 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 PTGISQ16647 500 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 CASKIN2Q8WXE0 1202 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 DRC1Q96MC2 740 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 EYA3Q99504 573 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 PLEKHA4Q9H4M7 779 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 TMBIM4Q9HC24 238 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 NFU1Q9UMS0 254 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 NHSQ6T4R5 1651 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 SPATA31A1Q5TZJ5 1347 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 NRAPQ86VF7 1730 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 GPR75-ASB3A0A0A6YYF3 556 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 A0A0A6YYK5 440 aaPredicted RBP16.74■□□□□ 0.27
C9orf3-204ENST00000424143 FRMD3A2A2Y4 597 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 TULP1O00294 542 aaPredicted RBP16.74■□□□□ 0.27
C9orf3-204ENST00000424143 NCK2O43639 380 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 EDIL3O43854 480 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 PRKCIP41743 596 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 MATR3P43243 847 aaKnown RBP eCLIP16.74■□□□□ 0.274e-6■■□□□ 13.2
C9orf3-204ENST00000424143 USP11P51784 963 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 ADCY7P51828 1080 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 NPEPPSP55786 919 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 GUCY2DQ02846 1103 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 COASYQ13057 564 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 MTMR3Q13615 1198 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 TDRD12Q587J7 1177 aaKnown RBP16.74■□□□□ 0.27
C9orf3-204ENST00000424143 FAM26FQ5R3K3 315 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 AGBL2Q5U5Z8 902 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 CCDC65Q8IXS2 484 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 GLT8D2Q9H1C3 349 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 GANQ9H2C0 597 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 TFCP2L1Q9NZI6 479 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 STX8Q9UNK0 236 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 PCDHA2Q9Y5H9 948 aa16.74■□□□□ 0.27
C9orf3-204ENST00000424143 PITPNM2Q9BZ72 1349 aa16.73■□□□□ 0.27
C9orf3-204ENST00000424143 FAM107AO95990 144 aa16.73■□□□□ 0.27
C9orf3-204ENST00000424143 TM4SF1P30408 202 aa16.73■□□□□ 0.27
C9orf3-204ENST00000424143 HNRNPH1P31943 449 aaKnown RBP16.73■□□□□ 0.27
C9orf3-204ENST00000424143 CXCR5P32302 372 aa16.73■□□□□ 0.27
C9orf3-204ENST00000424143 ITGB3BPQ13352 177 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-204ENST00000424143 CCDC40Q4G0X9 1142 aa16.73■□□□□ 0.27
C9orf3-204ENST00000424143 RUFY4Q6ZNE9 571 aa16.73■□□□□ 0.27
C9orf3-204ENST00000424143 ARMC9Q7Z3E5 817 aa16.73■□□□□ 0.27
C9orf3-204ENST00000424143 OTUD6BQ8N6M0 293 aa16.73■□□□□ 0.27
C9orf3-204ENST00000424143 SNX29Q8TEQ0 813 aa16.73■□□□□ 0.27
C9orf3-204ENST00000424143 TAF4BQ92750 862 aa16.73■□□□□ 0.27
C9orf3-204ENST00000424143 HPS3Q969F9 1004 aa16.73■□□□□ 0.27
C9orf3-204ENST00000424143 RNPC3Q96LT9 517 aaKnown RBP16.73■□□□□ 0.27
C9orf3-204ENST00000424143 LSM14BQ9BX40 385 aaKnown RBP16.73■□□□□ 0.27
C9orf3-204ENST00000424143 NARFQ9UHQ1 456 aa16.73■□□□□ 0.27
C9orf3-204ENST00000424143 NENFQ9UMX5 172 aa16.73■□□□□ 0.27
C9orf3-204ENST00000424143 STRCQ7RTU9 1775 aa16.73■□□□□ 0.27
C9orf3-204ENST00000424143 SBF2Q86WG5 1849 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 PAEPP09466 180 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 KLRC1P26715 233 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 CLK2P49760 499 aaKnown RBP16.72■□□□□ 0.27
C9orf3-204ENST00000424143 PDCLQ13371 301 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 RPS6KA1Q15418 735 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 ASIC2Q16515 512 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 NAA35Q5VZE5 725 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 C6orf89Q6UWU4 347 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 FRMD5Q7Z6J6 570 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 SLFN11Q7Z7L1 901 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 KCTD17Q8N5Z5 321 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 LMBR1Q8WVP7 490 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 SEC14L1Q92503 715 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 P3H4Q92791 437 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 EEF2KMTQ96G04 330 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 ZFP91Q96JP5 570 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-204ENST00000424143 PIGSQ96S52 555 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 MXD3Q9BW11 206 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 RTFDC1Q9BY42 306 aaPredicted RBP16.72■□□□□ 0.27
C9orf3-204ENST00000424143 PANK4Q9NVE7 773 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.72■□□□□ 0.27
C9orf3-204ENST00000424143 STK24Q9Y6E0 443 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 MYO3BQ8WXR4 1341 aa16.72■□□□□ 0.27
C9orf3-204ENST00000424143 TRAF5O00463 557 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 BUB1O43683 1085 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 KIF4AO95239 1232 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 FAM153BP0C7A2 387 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 ZBTB48P10074 688 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-204ENST00000424143 LIG3P49916 1009 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 GSCP56915 257 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-204ENST00000424143 PPP2R5EQ16537 467 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 FAM153CQ494X1 144 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 CCDC91Q7Z6B0 441 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 SLF2Q8IX21 1173 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 RASGEF1CQ8N431 466 aa16.71■□□□□ 0.27
C9orf3-204ENST00000424143 MARCH10Q8NA82 808 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-204ENST00000424143 ZNF473Q8WTR7 871 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms