RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 SLC44A4Q53GD3 710 aa12□□□□□ -0.49
TNC-203ENST00000423613 MFSD14BQ5SR56 506 aa12□□□□□ -0.49
TNC-203ENST00000423613 CATSPER3Q86XQ3 398 aa12□□□□□ -0.49
TNC-203ENST00000423613 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12□□□□□ -0.49
TNC-203ENST00000423613 OMA1Q96E52 524 aa12□□□□□ -0.49
TNC-203ENST00000423613 ABCF3Q9NUQ8 709 aa12□□□□□ -0.49
TNC-203ENST00000423613 ITM2BQ9Y287 266 aa12□□□□□ -0.49
TNC-203ENST00000423613 KDM3AQ9Y4C1 1321 aa12□□□□□ -0.49
TNC-203ENST00000423613 PLEKHG3A1L390 1219 aa12□□□□□ -0.49
TNC-203ENST00000423613 NR1D1P20393 614 aa12□□□□□ -0.49
TNC-203ENST00000423613 TECP42680 631 aa12□□□□□ -0.49
TNC-203ENST00000423613 ARHGEF18Q6ZSZ5 1173 aa12□□□□□ -0.49
TNC-203ENST00000423613 AKT3Q9Y243 479 aa12□□□□□ -0.49
TNC-203ENST00000423613 ABCC4O15439 1325 aa12□□□□□ -0.49
TNC-203ENST00000423613 USP17L12C9JPN9 530 aa12□□□□□ -0.49
TNC-203ENST00000423613 USP17L21D6R901 530 aa12□□□□□ -0.49
TNC-203ENST00000423613 RAD23BP54727 409 aa12□□□□□ -0.49
TNC-203ENST00000423613 MYOCDQ8IZQ8 938 aa12□□□□□ -0.49
TNC-203ENST00000423613 BLIDQ8IZY5 108 aa12□□□□□ -0.49
TNC-203ENST00000423613 NR1H4Q96RI1 486 aaPredicted RBP12□□□□□ -0.49
TNC-203ENST00000423613 ARHGEF10O15013 1369 aa12□□□□□ -0.49
TNC-203ENST00000423613 MAPK13O15264 365 aa12□□□□□ -0.49
TNC-203ENST00000423613 PFKFB2O60825 505 aa12□□□□□ -0.49
TNC-203ENST00000423613 EPHB4P54760 987 aa12□□□□□ -0.49
TNC-203ENST00000423613 CCNA1P78396 465 aa12□□□□□ -0.49
TNC-203ENST00000423613 HDDC2Q7Z4H3 204 aa12□□□□□ -0.49
TNC-203ENST00000423613 GNL3Q9BVP2 549 aaKnown RBP eCLIP12□□□□□ -0.49
TNC-203ENST00000423613 METTL14Q9HCE5 456 aaKnown RBP12□□□□□ -0.49
TNC-203ENST00000423613 STX18Q9P2W9 335 aaKnown RBP12□□□□□ -0.49
TNC-203ENST00000423613 MTMR6Q9Y217 621 aa12□□□□□ -0.49
TNC-203ENST00000423613 ZMYM6O95789 1325 aa12□□□□□ -0.49
TNC-203ENST00000423613 SSH2Q76I76 1423 aa12□□□□□ -0.49
TNC-203ENST00000423613 XRCC5P13010 732 aaKnown RBP12□□□□□ -0.49
TNC-203ENST00000423613 CTSWP56202 376 aa12□□□□□ -0.49
TNC-203ENST00000423613 GOLGA8FQ08AF8 430 aa12□□□□□ -0.49
TNC-203ENST00000423613 GOLGA8DPQ0D2H9 430 aa12□□□□□ -0.49
TNC-203ENST00000423613 XKR9Q5GH70 373 aa12□□□□□ -0.49
TNC-203ENST00000423613 RFX8Q6ZV50 586 aa12□□□□□ -0.49
TNC-203ENST00000423613 TRIM15Q9C019 465 aa12□□□□□ -0.49
TNC-203ENST00000423613 KIAA0232Q92628 1395 aa12□□□□□ -0.49
TNC-203ENST00000423613 SHANK2Q9UPX8 1470 aa12□□□□□ -0.49
TNC-203ENST00000423613 EIF4G3O43432 1585 aaKnown RBP12□□□□□ -0.49
TNC-203ENST00000423613 BLMP54132 1417 aaPredicted RBP12□□□□□ -0.49
TNC-203ENST00000423613 STAM2O75886 525 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 C1orf228Q6PIY5 440 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 IFNL3Q8IZI9 196 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 ECT2Q9H8V3 914 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 STAT1P42224 750 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 BTNL9Q6UXG8 535 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 ARL10Q8N8L6 244 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 TBC1D22AQ8WUA7 517 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 POLIQ9UNA4 740 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 PZPP20742 1482 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 RNF207Q6ZRF8 634 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 PARD6BQ9BYG5 372 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 ZNF277Q9NRM2 450 aaPredicted RBP11.99□□□□□ -0.49
TNC-203ENST00000423613 CHCHD3Q9NX63 227 aaKnown RBP11.99□□□□□ -0.49
TNC-203ENST00000423613 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.99□□□□□ -0.49
TNC-203ENST00000423613 GYG2O15488 501 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 TRIM37O94972 964 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 SPDYE1Q8NFV5 336 aaPredicted RBP11.99□□□□□ -0.49
TNC-203ENST00000423613 ZFYVE1Q9HBF4 777 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 ATP8A2Q9NTI2 1148 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 TRAF3IP3Q9Y228 551 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 THRAP3Q9Y2W1 955 aaKnown RBP11.99□□□□□ -0.49
TNC-203ENST00000423613 CLRN2A0PK11 232 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 TRIM16O95361 564 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 ZSCAN20P17040 1043 aaPredicted RBP11.99□□□□□ -0.49
TNC-203ENST00000423613 ADD1P35611 737 aaKnown RBP11.99□□□□□ -0.49
TNC-203ENST00000423613 C1orf146Q5VVC0 180 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 PDXDC1Q6P996 788 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 FAM180AQ6UWF9 173 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 SSH3Q8TE77 659 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 EAF2Q96CJ1 260 aaPredicted RBP11.99□□□□□ -0.49
TNC-203ENST00000423613 FTOQ9C0B1 505 aaKnown RBP eCLIP11.99□□□□□ -0.49
TNC-203ENST00000423613 COG4Q9H9E3 785 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 ZSWIM6Q9HCJ5 1215 aa11.99□□□□□ -0.49
TNC-203ENST00000423613 KDRP35968 1356 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 PRR23D1E9PI22 279 aaPredicted RBP11.98□□□□□ -0.49
TNC-203ENST00000423613 TLR3O15455 904 aaKnown RBP11.98□□□□□ -0.49
TNC-203ENST00000423613 PRR23D2P0DMB1 279 aaPredicted RBP11.98□□□□□ -0.49
TNC-203ENST00000423613 PKP1Q13835 747 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 SLC35F6Q8N357 371 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 ICA1LQ8NDH6 482 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 CLIC6Q96NY7 704 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 USP44Q9H0E7 712 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 SESN1Q9Y6P5 492 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 PFDN6O15212 129 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 KCNQ3O43525 872 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 KRT7P08729 469 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 POLR2MP0CAP2 368 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 HSPD1P10809 573 aaKnown RBP11.98□□□□□ -0.49
TNC-203ENST00000423613 ETF1P62495 437 aaKnown RBP11.98□□□□□ -0.49
TNC-203ENST00000423613 KRT33BQ14525 404 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 FAM160B1Q5W0V3 765 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 ADCK1Q86TW2 530 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 METTL23Q86XA0 190 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 SDR42E1Q8WUS8 393 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 GCNAQ96QF7 691 aa11.98□□□□□ -0.49
TNC-203ENST00000423613 CNOT10Q9H9A5 744 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms