RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 GGPS1O95749 300 aa17.75■□□□□ 0.43
DDX55-203ENST00000421670 AKR1A1P14550 325 aa17.75■□□□□ 0.43
DDX55-203ENST00000421670 MARCKSP29966 332 aaPredicted RBP17.75■□□□□ 0.43
DDX55-203ENST00000421670 MYH9P35579 1960 aaKnown RBP17.75■□□□□ 0.43
DDX55-203ENST00000421670 SP4Q02446 784 aa17.75■□□□□ 0.43
DDX55-203ENST00000421670 DUSP28Q4G0W2 176 aa17.75■□□□□ 0.43
DDX55-203ENST00000421670 IQSEC1Q6DN90 963 aa17.75■□□□□ 0.43
DDX55-203ENST00000421670 CYFIP1Q7L576 1253 aa17.75■□□□□ 0.43
DDX55-203ENST00000421670 SLFN12Q8IYM2 578 aa17.75■□□□□ 0.43
DDX55-203ENST00000421670 LINC00301Q8NCQ3 95 aa17.75■□□□□ 0.43
DDX55-203ENST00000421670 FAM184BQ9ULE4 1060 aa17.75■□□□□ 0.43
DDX55-203ENST00000421670 TELO2Q9Y4R8 837 aa17.75■□□□□ 0.43
DDX55-203ENST00000421670 LAD1O00515 517 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 SEPT4O43236 478 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 GAS7O60861 476 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 PSMD10O75832 226 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 BAG4O95429 457 aaKnown RBP17.74■□□□□ 0.43
DDX55-203ENST00000421670 YEATS4O95619 227 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 BMP15O95972 392 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 SLC39A14Q15043 492 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 IL17AQ16552 155 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 FAM20AQ96MK3 541 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 SENP7Q9BQF6 1050 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 SDF4Q9BRK5 362 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 TTC12Q9H892 705 aaPredicted RBP17.74■□□□□ 0.43
DDX55-203ENST00000421670 NFASCO94856 1347 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 SPTLC2O15270 562 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 CHMP2AO43633 222 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 FARP2O94887 1054 aaPredicted RBP17.74■□□□□ 0.43
DDX55-203ENST00000421670 ARHGAP1Q07960 439 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 NEDD9Q14511 834 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 MTFR1Q15390 333 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 LEO1Q8WVC0 666 aaPredicted RBP17.74■□□□□ 0.43
DDX55-203ENST00000421670 SPATA32Q96LK8 384 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 RIT2Q99578 217 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 TEKT3Q9BXF9 490 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 JPH1Q9HDC5 661 aaPredicted RBP17.74■□□□□ 0.43
DDX55-203ENST00000421670 HMX1Q9NP08 348 aaPredicted RBP17.74■□□□□ 0.43
DDX55-203ENST00000421670 TBC1D22BQ9NU19 505 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 VAV3Q9UKW4 847 aa17.74■□□□□ 0.43
DDX55-203ENST00000421670 GNEQ9Y223 722 aaKnown RBP17.74■□□□□ 0.43
DDX55-203ENST00000421670 VWA3AA6NCI4 1184 aa17.73■□□□□ 0.43
DDX55-203ENST00000421670 POTEMA6NI47 508 aa17.73■□□□□ 0.43
DDX55-203ENST00000421670 GH1P01241 217 aa17.73■□□□□ 0.43
DDX55-203ENST00000421670 PRPHP41219 470 aa17.73■□□□□ 0.43
DDX55-203ENST00000421670 TECP42680 631 aa17.73■□□□□ 0.43
DDX55-203ENST00000421670 GRIN1Q05586 938 aa17.73■□□□□ 0.43
DDX55-203ENST00000421670 CELF3Q5SZQ8 465 aaKnown RBP17.73■□□□□ 0.43
DDX55-203ENST00000421670 TLK2Q86UE8 772 aa17.73■□□□□ 0.43
DDX55-203ENST00000421670 DHX37Q8IY37 1157 aaKnown RBP17.73■□□□□ 0.43
DDX55-203ENST00000421670 MCOLN1Q9GZU1 580 aa17.73■□□□□ 0.43
DDX55-203ENST00000421670 UNC93B1Q9H1C4 597 aa17.73■□□□□ 0.43
DDX55-203ENST00000421670 UNC45AQ9H3U1 944 aa17.73■□□□□ 0.43
DDX55-203ENST00000421670 MLXIPQ9HAP2 919 aa17.73■□□□□ 0.43
DDX55-203ENST00000421670 FBXO2Q9UK22 296 aaPredicted RBP17.73■□□□□ 0.43
DDX55-203ENST00000421670 PCDHA12Q9UN75 941 aa17.73■□□□□ 0.43
DDX55-203ENST00000421670 POTEFA5A3E0 1075 aa17.72■□□□□ 0.43
DDX55-203ENST00000421670 CCNE2O96020 404 aa17.72■□□□□ 0.43
DDX55-203ENST00000421670 IRX5P78411 483 aaPredicted RBP17.72■□□□□ 0.43
DDX55-203ENST00000421670 SPIRE1Q08AE8 756 aa17.72■□□□□ 0.43
DDX55-203ENST00000421670 ARL6IP4Q66PJ3 421 aaKnown RBP17.72■□□□□ 0.43
DDX55-203ENST00000421670 METTL7BQ6UX53 244 aa17.72■□□□□ 0.43
DDX55-203ENST00000421670 DTHD1Q6ZMT9 781 aa17.72■□□□□ 0.43
DDX55-203ENST00000421670 GIMAP8Q8ND71 665 aaPredicted RBP17.72■□□□□ 0.43
DDX55-203ENST00000421670 OR6J1Q8NGC5 347 aa17.72■□□□□ 0.43
DDX55-203ENST00000421670 KCNG4Q8TDN1 519 aa17.72■□□□□ 0.43
DDX55-203ENST00000421670 SCAND2PQ9GZW5 306 aaPredicted RBP17.72■□□□□ 0.43
DDX55-203ENST00000421670 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.72■□□□□ 0.43
DDX55-203ENST00000421670 SLC9A2Q9UBY0 812 aa17.72■□□□□ 0.43
DDX55-203ENST00000421670 DDX20Q9UHI6 824 aaKnown RBP17.72■□□□□ 0.43
DDX55-203ENST00000421670 SYNRGQ9UMZ2 1314 aa17.71■□□□□ 0.43
DDX55-203ENST00000421670 NKRFO15226 690 aaKnown RBP eCLIP17.71■□□□□ 0.43
DDX55-203ENST00000421670 CCL5P13501 91 aa17.71■□□□□ 0.43
DDX55-203ENST00000421670 TMEM266Q2M3C6 531 aa17.71■□□□□ 0.43
DDX55-203ENST00000421670 HSDL1Q3SXM5 330 aa17.71■□□□□ 0.43
DDX55-203ENST00000421670 NCAPH2Q6IBW4 605 aa17.71■□□□□ 0.43
DDX55-203ENST00000421670 ZNF333Q96JL9 665 aa17.71■□□□□ 0.43
DDX55-203ENST00000421670 SPATA33Q96N06 139 aa17.71■□□□□ 0.43
DDX55-203ENST00000421670 CLIC6Q96NY7 704 aa17.71■□□□□ 0.43
DDX55-203ENST00000421670 RCOR1Q9UKL0 485 aa17.71■□□□□ 0.43
DDX55-203ENST00000421670 DYNC1LI2O43237 492 aaPredicted RBP17.7■□□□□ 0.42
DDX55-203ENST00000421670 PPP6R2O75170 966 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 DUSP11O75319 330 aaKnown RBP17.7■□□□□ 0.42
DDX55-203ENST00000421670 RARBP10826 455 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 ME1P48163 572 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 FXR2P51116 673 aaKnown RBP eCLIP17.7■□□□□ 0.42
DDX55-203ENST00000421670 KRT76Q01546 638 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 PPP2R5CQ13362 524 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 B3GNT9Q6UX72 402 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 KRI1Q8N9T8 703 aaKnown RBP17.7■□□□□ 0.42
DDX55-203ENST00000421670 ARMC5Q96C12 935 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 TCEAL9Q9UHQ7 104 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 SRPRBQ9Y5M8 271 aaKnown RBP17.7■□□□□ 0.42
DDX55-203ENST00000421670 ELP1O95163 1332 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 PP2D1A8MPX8 630 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 EML1O00423 815 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 PGK1P00558 417 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 ACTR2P61160 394 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 LAMC2Q13753 1193 aa17.7■□□□□ 0.42
DDX55-203ENST00000421670 IGSF22Q8N9C0 903 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms