RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 CYFIP1Q7L576 1253 aa19.83■□□□□ 0.77
LINC00271-201ENST00000421378 DHX37Q8IY37 1157 aaKnown RBP19.83■□□□□ 0.77
LINC00271-201ENST00000421378 HAS1Q92839 578 aa19.83■□□□□ 0.77
LINC00271-201ENST00000421378 GJA10Q969M2 543 aa19.83■□□□□ 0.77
LINC00271-201ENST00000421378 USP28Q96RU2 1077 aa19.83■□□□□ 0.77
LINC00271-201ENST00000421378 RIT2Q99578 217 aa19.83■□□□□ 0.77
LINC00271-201ENST00000421378 TMEM60Q9H2L4 133 aa19.83■□□□□ 0.77
LINC00271-201ENST00000421378 MLXIPQ9HAP2 919 aa19.83■□□□□ 0.77
LINC00271-201ENST00000421378 JPH1Q9HDC5 661 aaPredicted RBP19.83■□□□□ 0.77
LINC00271-201ENST00000421378 CEP131Q9UPN4 1083 aa19.83■□□□□ 0.77
LINC00271-201ENST00000421378 Q9Y3F1 56 aa19.83■□□□□ 0.77
LINC00271-201ENST00000421378 NFASCO94856 1347 aa19.83■□□□□ 0.77
LINC00271-201ENST00000421378 DOCK5Q9H7D0 1870 aa19.83■□□□□ 0.76
LINC00271-201ENST00000421378 LAD1O00515 517 aa19.83■□□□□ 0.76
LINC00271-201ENST00000421378 SORBS3O60504 671 aa19.83■□□□□ 0.76
LINC00271-201ENST00000421378 GAS7O60861 476 aa19.83■□□□□ 0.76
LINC00271-201ENST00000421378 BAG4O95429 457 aaKnown RBP19.83■□□□□ 0.76
LINC00271-201ENST00000421378 BMP15O95972 392 aa19.83■□□□□ 0.76
LINC00271-201ENST00000421378 OR52Z1P0C646 297 aa19.83■□□□□ 0.76
LINC00271-201ENST00000421378 CEBPZQ03701 1054 aaKnown RBP19.83■□□□□ 0.76
LINC00271-201ENST00000421378 ARHGAP1Q07960 439 aa19.83■□□□□ 0.76
LINC00271-201ENST00000421378 LAMC2Q13753 1193 aa19.83■□□□□ 0.76
LINC00271-201ENST00000421378 OR6J1Q8NGC5 347 aa19.83■□□□□ 0.76
LINC00271-201ENST00000421378 EMID1Q96A84 441 aaPredicted RBP19.83■□□□□ 0.76
LINC00271-201ENST00000421378 DEFB118Q96PH6 123 aa19.83■□□□□ 0.76
LINC00271-201ENST00000421378 MTMR9Q96QG7 549 aa19.83■□□□□ 0.76
LINC00271-201ENST00000421378 XPNPEP3Q9NQH7 507 aa19.83■□□□□ 0.76
LINC00271-201ENST00000421378 POLR3EQ9NVU0 708 aa19.83■□□□□ 0.76
LINC00271-201ENST00000421378 TCEAL9Q9UHQ7 104 aa19.83■□□□□ 0.76
LINC00271-201ENST00000421378 CLIC4Q9Y696 253 aa19.83■□□□□ 0.76
LINC00271-201ENST00000421378 FRMPD3Q5JV73 1810 aa19.82■□□□□ 0.76
LINC00271-201ENST00000421378 DDX39AO00148 427 aaKnown RBP19.82■□□□□ 0.76
LINC00271-201ENST00000421378 DHX15O43143 795 aaKnown RBP19.82■□□□□ 0.76
LINC00271-201ENST00000421378 DYNC1LI2O43237 492 aaPredicted RBP19.82■□□□□ 0.76
LINC00271-201ENST00000421378 LHX8Q68G74 356 aa19.82■□□□□ 0.76
LINC00271-201ENST00000421378 ATL3Q6DD88 541 aa19.82■□□□□ 0.76
LINC00271-201ENST00000421378 SPATA33Q96N06 139 aa19.82■□□□□ 0.76
LINC00271-201ENST00000421378 TEKT3Q9BXF9 490 aa19.82■□□□□ 0.76
LINC00271-201ENST00000421378 AP5M1Q9H0R1 490 aa19.82■□□□□ 0.76
LINC00271-201ENST00000421378 BCAS3Q9H6U6 928 aa19.82■□□□□ 0.76
LINC00271-201ENST00000421378 SPC25Q9HBM1 224 aa19.82■□□□□ 0.76
LINC00271-201ENST00000421378 SYNRGQ9UMZ2 1314 aa19.82■□□□□ 0.76
LINC00271-201ENST00000421378 PSMD10O75832 226 aa19.81■□□□□ 0.76
LINC00271-201ENST00000421378 ATP2C1P98194 919 aaPredicted RBP19.81■□□□□ 0.76
LINC00271-201ENST00000421378 SP4Q02446 784 aa19.81■□□□□ 0.76
LINC00271-201ENST00000421378 DNM1Q05193 864 aaKnown RBP19.81■□□□□ 0.76
LINC00271-201ENST00000421378 C4orf32Q8N8J7 132 aa19.81■□□□□ 0.76
LINC00271-201ENST00000421378 SLC9A2Q9UBY0 812 aa19.81■□□□□ 0.76
LINC00271-201ENST00000421378 NOP56O00567 594 aaKnown RBP19.8■□□□□ 0.76
LINC00271-201ENST00000421378 PGK1P00558 417 aa19.8■□□□□ 0.76
LINC00271-201ENST00000421378 C6orf222P0C671 652 aaPredicted RBP19.8■□□□□ 0.76
LINC00271-201ENST00000421378 TXKP42681 527 aa19.8■□□□□ 0.76
LINC00271-201ENST00000421378 NASPP49321 788 aaPredicted RBP19.8■□□□□ 0.76
LINC00271-201ENST00000421378 GJA9P57773 515 aa19.8■□□□□ 0.76
LINC00271-201ENST00000421378 HSDL1Q3SXM5 330 aa19.8■□□□□ 0.76
LINC00271-201ENST00000421378 PPTC7Q8NI37 304 aa19.8■□□□□ 0.76
LINC00271-201ENST00000421378 TTC12Q9H892 705 aaPredicted RBP19.8■□□□□ 0.76
LINC00271-201ENST00000421378 TFIP11Q9UBB9 837 aaKnown RBP19.8■□□□□ 0.76
LINC00271-201ENST00000421378 CFAP45Q9UL16 551 aa19.8■□□□□ 0.76
LINC00271-201ENST00000421378 PCDHA12Q9UN75 941 aa19.8■□□□□ 0.76
LINC00271-201ENST00000421378 ADAMTS4O75173 837 aa19.79■□□□□ 0.76
LINC00271-201ENST00000421378 GJB1P08034 283 aa19.79■□□□□ 0.76
LINC00271-201ENST00000421378 PRPHP41219 470 aa19.79■□□□□ 0.76
LINC00271-201ENST00000421378 CPT1AP50416 773 aa19.79■□□□□ 0.76
LINC00271-201ENST00000421378 KRT76Q01546 638 aa19.79■□□□□ 0.76
LINC00271-201ENST00000421378 AFG1LQ8WV93 481 aa19.79■□□□□ 0.76
LINC00271-201ENST00000421378 UPF3AQ9H1J1 476 aaKnown RBP19.79■□□□□ 0.76
LINC00271-201ENST00000421378 POTEFA5A3E0 1075 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 CHMP2AO43633 222 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 NCLP19338 710 aaKnown RBP19.78■□□□□ 0.76
LINC00271-201ENST00000421378 KRT85P78386 507 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 PTPAQ15257 358 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 FSCN1Q16658 493 aaKnown RBP19.78■□□□□ 0.76
LINC00271-201ENST00000421378 BRDTQ58F21 947 aaPredicted RBP19.78■□□□□ 0.76
LINC00271-201ENST00000421378 ARL6IP4Q66PJ3 421 aaKnown RBP19.78■□□□□ 0.76
LINC00271-201ENST00000421378 ZNF746Q6NUN9 644 aaPredicted RBP19.78■□□□□ 0.76
LINC00271-201ENST00000421378 U2AF1L4Q8WU68 220 aaKnown RBP19.78■□□□□ 0.76
LINC00271-201ENST00000421378 TMEM106CQ9BVX2 250 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 VAV3Q9UKW4 847 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 ELP1O95163 1332 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 A6NJR5 290 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 YEATS4O95619 227 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 CCNE2O96020 404 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 MYCNP04198 464 aaPredicted RBP19.78■□□□□ 0.76
LINC00271-201ENST00000421378 MMP3P08254 477 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 NKX3-2P78367 333 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 PPP2R5CQ13362 524 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 STK38Q15208 465 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 TMEM266Q2M3C6 531 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 RNF180Q86T96 592 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 SMAP1Q8IYB5 467 aaPredicted RBP19.78■□□□□ 0.76
LINC00271-201ENST00000421378 CHAMP1Q96JM3 812 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 GPR20Q99678 358 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 UNC45AQ9H3U1 944 aa19.78■□□□□ 0.76
LINC00271-201ENST00000421378 MYADML2A6NDP7 307 aa19.77■□□□□ 0.76
LINC00271-201ENST00000421378 CTAGE5O15320 804 aa19.77■□□□□ 0.76
LINC00271-201ENST00000421378 SGPL1O95470 568 aa19.77■□□□□ 0.76
LINC00271-201ENST00000421378 TECP42680 631 aa19.77■□□□□ 0.76
LINC00271-201ENST00000421378 ACTR2P61160 394 aa19.77■□□□□ 0.76
LINC00271-201ENST00000421378 IRX5P78411 483 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms