RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 FAM178BQ8IXR5 827 aa14.96□□□□□ -0.01
LINC00339-203ENST00000420503 SP7Q8TDD2 431 aaPredicted RBP14.96□□□□□ -0.01
LINC00339-203ENST00000420503 ATP6V0A1Q93050 837 aa14.96□□□□□ -0.01
LINC00339-203ENST00000420503 RNPEPQ9H4A4 650 aa14.96□□□□□ -0.01
LINC00339-203ENST00000420503 SETD4Q9NVD3 440 aa14.96□□□□□ -0.01
LINC00339-203ENST00000420503 RTEL1Q9NZ71 1219 aa14.96□□□□□ -0.01
LINC00339-203ENST00000420503 LMCD1Q9NZU5 365 aa14.96□□□□□ -0.01
LINC00339-203ENST00000420503 PIEZO1Q92508 2521 aa14.96□□□□□ -0.02
LINC00339-203ENST00000420503 C17orf102A2RUQ5 167 aa14.95□□□□□ -0.02
LINC00339-203ENST00000420503 PI4K2BG5E9Z4 385 aa14.95□□□□□ -0.02
LINC00339-203ENST00000420503 PPFIA4O75335 1185 aa14.95□□□□□ -0.02
LINC00339-203ENST00000420503 MFAP1P55081 439 aaKnown RBP14.95□□□□□ -0.02
LINC00339-203ENST00000420503 COL9A3Q14050 684 aaPredicted RBP14.95□□□□□ -0.02
LINC00339-203ENST00000420503 IMMTQ16891 758 aaKnown RBP14.95□□□□□ -0.02
LINC00339-203ENST00000420503 EPC2Q52LR7 807 aa14.95□□□□□ -0.02
LINC00339-203ENST00000420503 TCEAL5Q5H9L2 206 aa14.95□□□□□ -0.02
LINC00339-203ENST00000420503 PTCRAQ6ISU1 281 aaPredicted RBP14.95□□□□□ -0.02
LINC00339-203ENST00000420503 GJD3Q8N144 294 aa14.95□□□□□ -0.02
LINC00339-203ENST00000420503 ZBTB10Q96DT7 871 aa14.95□□□□□ -0.02
LINC00339-203ENST00000420503 OSBPL3Q9H4L5 887 aa14.95□□□□□ -0.02
LINC00339-203ENST00000420503 C5orf42Q9H799 3197 aa14.94□□□□□ -0.02
LINC00339-203ENST00000420503 H3BRB1 525 aa14.94□□□□□ -0.02
LINC00339-203ENST00000420503 GPR37L1O60883 481 aa14.94□□□□□ -0.02
LINC00339-203ENST00000420503 PARNO95453 639 aaKnown RBP14.94□□□□□ -0.02
LINC00339-203ENST00000420503 AMHP03971 560 aa14.94□□□□□ -0.02
LINC00339-203ENST00000420503 PTH1RQ03431 593 aa14.94□□□□□ -0.02
LINC00339-203ENST00000420503 GRM4Q14833 912 aa14.94□□□□□ -0.02
LINC00339-203ENST00000420503 CCDC178Q5BJE1 867 aa14.94□□□□□ -0.02
LINC00339-203ENST00000420503 RUFY4Q6ZNE9 571 aa14.94□□□□□ -0.02
LINC00339-203ENST00000420503 TICAM2Q86XR7 235 aa14.94□□□□□ -0.02
LINC00339-203ENST00000420503 KRT23Q9C075 422 aa14.94□□□□□ -0.02
LINC00339-203ENST00000420503 TUT1Q9H6E5 874 aaKnown RBP14.94□□□□□ -0.02
LINC00339-203ENST00000420503 MLXIPQ9HAP2 919 aa14.94□□□□□ -0.02
LINC00339-203ENST00000420503 HCN4Q9Y3Q4 1203 aa14.94□□□□□ -0.02
LINC00339-203ENST00000420503 INSL6Q9Y581 213 aa14.94□□□□□ -0.02
LINC00339-203ENST00000420503 COL4A6Q14031 1691 aa14.93□□□□□ -0.02
LINC00339-203ENST00000420503 GCOM1H8Y6P7 765 aaPredicted RBP14.93□□□□□ -0.02
LINC00339-203ENST00000420503 LINC00271P0C7V0 271 aa14.93□□□□□ -0.02
LINC00339-203ENST00000420503 POLR2MP0CAP2 368 aa14.93□□□□□ -0.02
LINC00339-203ENST00000420503 GSPT1P15170 499 aaKnown RBP14.93□□□□□ -0.02
LINC00339-203ENST00000420503 PDE4AP27815 886 aa14.93□□□□□ -0.02
LINC00339-203ENST00000420503 CCND2P30279 289 aa14.93□□□□□ -0.02
LINC00339-203ENST00000420503 SSTR3P32745 418 aaPredicted RBP14.93□□□□□ -0.02
LINC00339-203ENST00000420503 UTP14CQ5TAP6 766 aaKnown RBP14.93□□□□□ -0.02
LINC00339-203ENST00000420503 EP400NLQ6ZTU2 488 aa14.93□□□□□ -0.02
LINC00339-203ENST00000420503 CYFIP1Q7L576 1253 aa14.93□□□□□ -0.02
LINC00339-203ENST00000420503 EXOC6Q8TAG9 804 aa14.93□□□□□ -0.02
LINC00339-203ENST00000420503 MRPL38Q96DV4 380 aaKnown RBP14.93□□□□□ -0.02
LINC00339-203ENST00000420503 YME1L1Q96TA2 773 aa14.93□□□□□ -0.02
LINC00339-203ENST00000420503 GPR20Q99678 358 aa14.93□□□□□ -0.02
LINC00339-203ENST00000420503 MAF1Q9H063 256 aa14.93□□□□□ -0.02
LINC00339-203ENST00000420503 RIOX1Q9H6W3 641 aa14.93□□□□□ -0.02
LINC00339-203ENST00000420503 GRXCR2A6NFK2 248 aa14.92□□□□□ -0.02
LINC00339-203ENST00000420503 EFCAB14O75071 495 aa14.92□□□□□ -0.02
LINC00339-203ENST00000420503 CYP21A2P08686 494 aa14.92□□□□□ -0.02
LINC00339-203ENST00000420503 GTF2F1P35269 517 aaKnown RBP eCLIP14.92□□□□□ -0.02
LINC00339-203ENST00000420503 ANTXR2P58335 489 aa14.92□□□□□ -0.02
LINC00339-203ENST00000420503 GPM6BQ13491 265 aa14.92□□□□□ -0.02
LINC00339-203ENST00000420503 CLUL1Q15846 466 aa14.92□□□□□ -0.02
LINC00339-203ENST00000420503 TMEM192Q8IY95 271 aa14.92□□□□□ -0.02
LINC00339-203ENST00000420503 NEK9Q8TD19 979 aa14.92□□□□□ -0.02
LINC00339-203ENST00000420503 LMBR1Q8WVP7 490 aa14.92□□□□□ -0.02
LINC00339-203ENST00000420503 TOP1MTQ969P6 601 aa14.92□□□□□ -0.02
LINC00339-203ENST00000420503 MYL10Q9BUA6 226 aa14.92□□□□□ -0.02
LINC00339-203ENST00000420503 FRMPD4Q14CM0 1322 aa14.92□□□□□ -0.02
LINC00339-203ENST00000420503 EMSYQ7Z589 1322 aa14.92□□□□□ -0.02
LINC00339-203ENST00000420503 CHRNA1P02708 482 aa14.91□□□□□ -0.02
LINC00339-203ENST00000420503 ADAM17P78536 824 aa14.91□□□□□ -0.02
LINC00339-203ENST00000420503 DLX2Q07687 328 aaPredicted RBP14.91□□□□□ -0.02
LINC00339-203ENST00000420503 USP17L6PQ6QN14 398 aa14.91□□□□□ -0.02
LINC00339-203ENST00000420503 BANK1Q8NDB2 785 aa14.91□□□□□ -0.02
LINC00339-203ENST00000420503 SEPT8Q92599 483 aa14.91□□□□□ -0.02
LINC00339-203ENST00000420503 INPP4AQ96PE3 977 aaPredicted RBP14.91□□□□□ -0.02
LINC00339-203ENST00000420503 IFIH1Q9BYX4 1025 aaKnown RBP14.91□□□□□ -0.02
LINC00339-203ENST00000420503 CNNM2Q9H8M5 875 aa14.91□□□□□ -0.02
LINC00339-203ENST00000420503 KAT6AQ92794 2004 aa14.91□□□□□ -0.02
LINC00339-203ENST00000420503 SPATA31C2B4DYI2 1134 aa14.9□□□□□ -0.02
LINC00339-203ENST00000420503 H3BNC9 293 aa14.9□□□□□ -0.02
LINC00339-203ENST00000420503 NOP56O00567 594 aaKnown RBP14.9□□□□□ -0.02
LINC00339-203ENST00000420503 IFIT3O14879 490 aaKnown RBP14.9□□□□□ -0.02
LINC00339-203ENST00000420503 GRM6O15303 877 aa14.9□□□□□ -0.02
LINC00339-203ENST00000420503 GHRP10912 638 aa14.9□□□□□ -0.02
LINC00339-203ENST00000420503 LTBRP36941 435 aa14.9□□□□□ -0.02
LINC00339-203ENST00000420503 ARHGAP4P98171 946 aa14.9□□□□□ -0.02
LINC00339-203ENST00000420503 TROAPQ12815 778 aa14.9□□□□□ -0.02
LINC00339-203ENST00000420503 KCNV1Q6PIU1 500 aa14.9□□□□□ -0.02
LINC00339-203ENST00000420503 METTL7BQ6UX53 244 aa14.9□□□□□ -0.02
LINC00339-203ENST00000420503 UIMC1Q96RL1 719 aa14.9□□□□□ -0.02
LINC00339-203ENST00000420503 RWDD1Q9H446 243 aaPredicted RBP14.9□□□□□ -0.02
LINC00339-203ENST00000420503 PKD2L1Q9P0L9 805 aa14.9□□□□□ -0.02
LINC00339-203ENST00000420503 CTNNA3Q9UI47 895 aa14.9□□□□□ -0.02
LINC00339-203ENST00000420503 RALGAPA2Q2PPJ7 1873 aa14.9□□□□□ -0.02
LINC00339-203ENST00000420503 ZNF318Q5VUA4 2279 aa14.9□□□□□ -0.02
LINC00339-203ENST00000420503 KIAA1671Q9BY89 1806 aa14.89□□□□□ -0.03
LINC00339-203ENST00000420503 PNMA6FA0A0J9YX94 578 aa14.89□□□□□ -0.03
LINC00339-203ENST00000420503 ATP9AO75110 1047 aa14.89□□□□□ -0.03
LINC00339-203ENST00000420503 TGFB3P10600 412 aa14.89□□□□□ -0.03
LINC00339-203ENST00000420503 MARK3P27448 753 aa14.89□□□□□ -0.03
LINC00339-203ENST00000420503 ICAM3P32942 547 aa14.89□□□□□ -0.03
LINC00339-203ENST00000420503 RAB11FIP4Q86YS3 637 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms