RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 MAP7D3Q8IWC1 876 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 BBS5Q8N3I7 341 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 P3H4Q92791 437 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 TRIM11Q96F44 468 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 DHTKD1Q96HY7 919 aaPredicted RBP9.22□□□□□ -0.93
UBR4-206ENST00000419533 WRNIP1Q96S55 665 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 RRAGCQ9HB90 399 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 VPS18Q9P253 973 aa9.22□□□□□ -0.93
UBR4-206ENST00000419533 A6NJR5 290 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 ZNF233A6NK53 670 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 LTN1O94822 1766 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 ITKQ08881 620 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 LONRF3Q496Y0 759 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 PDXDC2PQ6P474 469 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 INTS8Q75QN2 995 aaKnown RBP9.21□□□□□ -0.93
UBR4-206ENST00000419533 EEPD1Q7L9B9 569 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.21□□□□□ -0.93
UBR4-206ENST00000419533 RASGRP4Q8TDF6 673 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 ATP2A3Q93084 1043 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 ZNF521Q96K83 1311 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.21□□□□□ -0.93
UBR4-206ENST00000419533 XPO4Q9C0E2 1151 aaKnown RBP9.21□□□□□ -0.93
UBR4-206ENST00000419533 PCDHB4Q9Y5E5 795 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 BZW2Q9Y6E2 419 aaKnown RBP9.21□□□□□ -0.93
UBR4-206ENST00000419533 DTNBO60941 627 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 JAK3P52333 1124 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 IRX5P78411 483 aaPredicted RBP9.21□□□□□ -0.93
UBR4-206ENST00000419533 MTERF2Q49AM1 385 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 RINT1Q6NUQ1 792 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 GPIHBP1Q8IV16 184 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 TCP11Q8WWU5 503 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 POLR3EQ9NVU0 708 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 ZSWIM5Q9P217 1185 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 NOC2LQ9Y3T9 749 aaKnown RBP9.21□□□□□ -0.93
UBR4-206ENST00000419533 ZHX2Q9Y6X8 837 aa9.21□□□□□ -0.93
UBR4-206ENST00000419533 PHLPP2Q6ZVD8 1323 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 GOLGA8CPA6NN73 597 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 MCAMP43121 646 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 MYO1EQ12965 1108 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 ADCK5Q3MIX3 580 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 NSUN7Q8NE18 718 aaKnown RBP9.21□□□□□ -0.94
UBR4-206ENST00000419533 PGBD1Q96JS3 809 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 RPGRIP1Q96KN7 1286 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 PLCB1Q9NQ66 1216 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 PSMD14O00487 310 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 MYL3P08590 195 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 CAPN2P17655 700 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 RASSF7Q02833 373 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 DDR1Q08345 913 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 SREBF2Q12772 1141 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 PI4K2BQ8TCG2 481 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 FAM167AQ96KS9 214 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.21□□□□□ -0.942e-6■■■■□ 21
UBR4-206ENST00000419533 MKRN1Q9UHC7 482 aaKnown RBP9.21□□□□□ -0.94
UBR4-206ENST00000419533 SLC12A6Q9UHW9 1150 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 AFG3L2Q9Y4W6 797 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 ZNF500O60304 480 aaPredicted RBP9.21□□□□□ -0.94
UBR4-206ENST00000419533 EIF2AK2P19525 551 aaKnown RBP9.21□□□□□ -0.94
UBR4-206ENST00000419533 NR2F2P24468 414 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 COPB2P35606 906 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 TPD52P55327 224 aaPredicted RBP9.21□□□□□ -0.94
UBR4-206ENST00000419533 STXBP2Q15833 593 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 RSRC2Q7L4I2 434 aaKnown RBP9.21□□□□□ -0.94
UBR4-206ENST00000419533 GPC2Q8N158 579 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 RASSF4Q9H2L5 321 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 TDRD3Q9H7E2 651 aaKnown RBP9.21□□□□□ -0.94
UBR4-206ENST00000419533 RSPH14Q9UHP6 348 aa9.21□□□□□ -0.94
UBR4-206ENST00000419533 ANKRD26Q9UPS8 1709 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 EBAG9O00559 213 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 RIOK3O14730 519 aaKnown RBP9.2□□□□□ -0.94
UBR4-206ENST00000419533 H2AFZP0C0S5 128 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 NDUFA8P51970 172 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 CUL4BQ13620 913 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 DNAJC21Q5F1R6 531 aaKnown RBP9.2□□□□□ -0.94
UBR4-206ENST00000419533 HHATQ5VTY9 493 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 BSPRYQ5W0U4 402 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 H2AFVQ71UI9 128 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 FAM186BQ8IYM0 893 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 STRBPQ96SI9 672 aaKnown RBP9.2□□□□□ -0.94
UBR4-206ENST00000419533 VPS37BQ9H9H4 285 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 PHRF1Q9P1Y6 1649 aaKnown RBP9.2□□□□□ -0.94
UBR4-206ENST00000419533 CYP2D7A0A087X1C5 515 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 I3L4J1 428 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 MED7O43513 233 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 VIMP08670 466 aaKnown RBP9.2□□□□□ -0.94
UBR4-206ENST00000419533 PLCB4Q15147 1175 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 RASEFQ8IZ41 740 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 STAG1Q8WVM7 1258 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 COL3A1P02461 1466 aaPredicted RBP9.2□□□□□ -0.94
UBR4-206ENST00000419533 MROH7-TTC4A0A0A0MT08 1334 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 USP17L10C9JJH3 530 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 CIB2O75838 187 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 TBC1D8O95759 1140 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 AFPP02771 609 aaKnown RBP9.2□□□□□ -0.94
UBR4-206ENST00000419533 TM4SF1P30408 202 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 PHBP35232 272 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 ZNF157P51786 506 aaPredicted RBP9.2□□□□□ -0.94
UBR4-206ENST00000419533 PRPSAP1Q14558 356 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 MUM1L1Q5H9M0 696 aa9.2□□□□□ -0.94
UBR4-206ENST00000419533 PTF1AQ7RTS3 328 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms