RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 PDE2AO00408 941 aaPredicted RBP12.9□□□□□ -0.34
CSPG4P3Y-201ENST00000418188 NKRFO15226 690 aaKnown RBP eCLIP12.9□□□□□ -0.34
CSPG4P3Y-201ENST00000418188 SNHG28P0DPA3 235 aa12.9□□□□□ -0.34
CSPG4P3Y-201ENST00000418188 TCP10Q12799 353 aa12.9□□□□□ -0.34
CSPG4P3Y-201ENST00000418188 TCERG1LQ5VWI1 586 aa12.9□□□□□ -0.34
CSPG4P3Y-201ENST00000418188 POTEBQ6S5H4 581 aa12.9□□□□□ -0.34
CSPG4P3Y-201ENST00000418188 RNF10Q8N5U6 811 aaKnown RBP12.9□□□□□ -0.34
CSPG4P3Y-201ENST00000418188 GLIS3Q8NEA6 775 aa12.9□□□□□ -0.34
CSPG4P3Y-201ENST00000418188 PURBQ96QR8 312 aaKnown RBP12.9□□□□□ -0.34
CSPG4P3Y-201ENST00000418188 TSPYL1Q9H0U9 437 aa12.9□□□□□ -0.34
CSPG4P3Y-201ENST00000418188 DNM3Q9UQ16 869 aa12.9□□□□□ -0.34
CSPG4P3Y-201ENST00000418188 GABPAQ06546 454 aa12.9□□□□□ -0.34
CSPG4P3Y-201ENST00000418188 SKIDA1Q1XH10 827 aa12.9□□□□□ -0.34
CSPG4P3Y-201ENST00000418188 SP8Q8IXZ3 490 aa12.9□□□□□ -0.34
CSPG4P3Y-201ENST00000418188 DDX4Q9NQI0 724 aaKnown RBP12.9□□□□□ -0.34
CSPG4P3Y-201ENST00000418188 HPCAL4Q9UM19 191 aa12.9□□□□□ -0.34
CSPG4P3Y-201ENST00000418188 PRLRP16471 622 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 PRR16Q569H4 304 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 FAM76AQ8TAV0 307 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 GOLGA6CA6NDK9 693 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 GOLGA6DP0CG33 693 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 NR2F2P24468 414 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 ASIC2Q16515 512 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 SLFN13Q68D06 897 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 TBC1D5Q92609 795 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 HAS1Q92839 578 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 ANO3Q9BYT9 981 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 GOLGA6AQ9NYA3 693 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 NOVP48745 357 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 KIAA0753Q2KHM9 967 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 QRICH1Q2TAL8 776 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 CERKLQ49MI3 558 aaPredicted RBP12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 CREG2Q8IUH2 290 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 LRRC1Q9BTT6 524 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 PLIN4Q96Q06 1357 aa12.89□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 OPA1O60313 960 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 HSF2BPO75031 334 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 TBCAO75347 108 aaKnown RBP12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 HOXA10P31260 410 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 GGCXP38435 758 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 NOP2P46087 812 aaKnown RBP12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 USP11P51784 963 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 SLC7A5Q01650 507 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 AEBP2Q6ZN18 517 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 ARHGAP27Q6ZUM4 889 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 MMGT1Q8N4V1 131 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 DNAJC19Q96DA6 116 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 KANSL2Q9H9L4 492 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 ARMCX3Q9UH62 379 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 NAV1Q8NEY1 1877 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 NCK2O43639 380 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 SHMT1P34896 483 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 MRPS25P82663 173 aaKnown RBP12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 CDC37Q16543 378 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 VPS36Q86VN1 386 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 BAP1Q92560 729 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 ZFP91Q96JP5 570 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 LRRC4BQ9NT99 713 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 STIM2Q9P246 746 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 RNF14Q9UBS8 474 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 ADAMTS1Q9UHI8 967 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 RSPH14Q9UHP6 348 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 ATP6V0A2Q9Y487 856 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 ECM1Q16610 540 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 USH1GQ495M9 461 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 DCAF17Q5H9S7 520 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 CDC42EP5Q6NZY7 148 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 PPP4R3CPQ6ZMV5 832 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 FAM133AQ8N9E0 248 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 MXD3Q9BW11 206 aa12.88□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 MYO3BQ8WXR4 1341 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 NPHP3-ACAD11A0A0J9YXS1 232 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 PPP1R11O60927 126 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 AARSP49588 968 aaKnown RBP eCLIP12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 EPHB4P54760 987 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 PABPC4Q13310 644 aaKnown RBP eCLIP12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 FOXR2Q6PJQ5 311 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 IFT20Q8IY31 132 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 RIN2Q8WYP3 895 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 POTEFA5A3E0 1075 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 POTEIP0CG38 1075 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 RPL13P26373 211 aaKnown RBP12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 STAT3P40763 770 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 ITIH3Q06033 890 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 IFI16Q16666 785 aaKnown RBP12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 POTEGQ6S5H5 508 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 POTEEQ6S8J3 1075 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 SYN2Q92777 582 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 AMNQ9BXJ7 453 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 IGKV6D-41A0A0C4DH26 115 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 PPP1R12BO60237 982 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 XRCC5P13010 732 aaKnown RBP12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 EEF2P13639 858 aaKnown RBP12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 MCTP2Q6DN12 878 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 KIAA0825Q8IV33 1275 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 IFT81Q8WYA0 676 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 RUBCNQ92622 972 aa12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 GJD4Q96KN9 370 aaPredicted RBP12.87□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 FAM196BA6NMK8 535 aa12.86□□□□□ -0.35
CSPG4P3Y-201ENST00000418188 MEIS1O00470 390 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms