RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 RPL11P62913 178 aaKnown RBP5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 RBM10P98175 930 aaKnown RBP5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 PRSS53Q2L4Q9 553 aa5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 MRM1Q6IN84 353 aaKnown RBP5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 EEPD1Q7L9B9 569 aa5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 MCF2L2Q86YR7 1114 aa5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 DCP2Q8IU60 420 aaKnown RBP5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 NPLOC4Q8TAT6 608 aa5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 FNIP1Q8TF40 1166 aa5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 HNRNPLLQ8WVV9 542 aaKnown RBP5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 DIO2Q92813 273 aa5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 RELTQ969Z4 430 aa5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 CHAMP1Q96JM3 812 aa5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 C20orf173Q96LM9 149 aa5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 MPHOSPH9Q99550 1183 aa5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 E9PCH4 1651 aa5.33□□□□□ -1.56
HMGB3P20-201ENST00000417997 RPRD2Q5VT52 1461 aaKnown RBP5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 KANK1Q14678 1352 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 A0A0G2JLL6 359 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 A0A1B0GTL3 188 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 B8ZZF3 427 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 AGRPO00253 132 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 FFAR3O14843 346 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 ZBTB7AO95365 584 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 PLA2G1BP04054 148 aaKnown RBP5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 FPR2P25090 351 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 HOXC12P31275 282 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 BCL6P41182 706 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 NFIXQ14938 502 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 SF1Q15637 639 aaKnown RBP5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 IQCEQ6IPM2 695 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 B3GNT8Q7Z7M8 397 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 PPIL6Q8IXY8 311 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 SMARCC2Q8TAQ2 1214 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 PLEKHO2Q8TD55 490 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 TRMT2BQ96GJ1 504 aaKnown RBP5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 SIN3AQ96ST3 1273 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 TIMM13Q9Y5L4 95 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 MROH1Q8NDA8 1641 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 A2MP01023 1474 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 MLH3Q9UHC1 1453 aa5.32□□□□□ -1.56
HMGB3P20-201ENST00000417997 CAMSAP1Q5T5Y3 1602 aa5.31□□□□□ -1.56
HMGB3P20-201ENST00000417997 KCNC1P48547 511 aa5.31□□□□□ -1.56
HMGB3P20-201ENST00000417997 KCNAB2Q13303 367 aa5.31□□□□□ -1.56
HMGB3P20-201ENST00000417997 E4F1Q66K89 784 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P20-201ENST00000417997 ANKS3Q6ZW76 656 aa5.31□□□□□ -1.56
HMGB3P20-201ENST00000417997 CEP68Q76N32 757 aa5.31□□□□□ -1.56
HMGB3P20-201ENST00000417997 CCDC103Q8IW40 242 aa5.31□□□□□ -1.56
HMGB3P20-201ENST00000417997 TP53I13Q8NBR0 393 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P20-201ENST00000417997 TMEM169Q96HH4 297 aa5.31□□□□□ -1.56
HMGB3P20-201ENST00000417997 KRTAP4-7Q9BYR0 210 aa5.31□□□□□ -1.56
HMGB3P20-201ENST00000417997 XYLT2Q9H1B5 865 aa5.31□□□□□ -1.56
HMGB3P20-201ENST00000417997 TMEFF2Q9UIK5 374 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P20-201ENST00000417997 KIF1BO60333 1816 aa5.31□□□□□ -1.56
HMGB3P20-201ENST00000417997 ARHGEF40Q8TER5 1519 aa5.31□□□□□ -1.56
HMGB3P20-201ENST00000417997 EFCAB6Q5THR3 1501 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 KRTAP9-7A8MTY7 169 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 CPP00450 1065 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 SLURP1P55000 103 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 CACNB2Q08289 660 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 CYP4F3Q08477 520 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 SMAD4Q13485 552 aaKnown RBP5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 SLC10A6Q3KNW5 377 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 AFAP1Q8N556 730 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 CELF2-AS1Q8N7Q2 184 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 TMEM145Q8NBT3 493 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 ZNF526Q8TF50 670 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 ZBTB8AQ96BR9 441 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 DDX11Q96FC9 970 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 CCDC140Q96MF4 163 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 NOX5Q96PH1 765 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 SPATA25Q9BR10 227 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 YIPF4Q9BSR8 244 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 ADAM7Q9H2U9 754 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 LUC7LQ9NQ29 371 aaKnown RBP5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 PALD1Q9ULE6 856 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 COA3Q9Y2R0 106 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 PCDHA2Q9Y5H9 948 aa5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 POLR1AO95602 1720 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P20-201ENST00000417997 VWDEQ8N2E2 1590 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 REREQ9P2R6 1566 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 TRPM2O94759 1503 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 E9PSI1 815 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 PRRG2O14669 202 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 FOXD2O60548 495 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 CYP2C8P10632 490 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 LTBRP36941 435 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 GFRA1P56159 465 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 VWA3BQ502W6 1294 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 CD300LDQ6UXZ3 194 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 LIPIQ6XZB0 460 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 ETV3LQ6ZN32 361 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 MILR1Q7Z6M3 343 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 CPA5Q8WXQ8 436 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 SEC14L1Q92503 715 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 EPN3Q9H201 632 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 USP40Q9NVE5 1235 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 PPP1R1BQ9UD71 204 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 CLTCL1P53675 1640 aa5.29□□□□□ -1.56
HMGB3P20-201ENST00000417997 CCDC144AA2RUR9 1427 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms