RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 PXMP2Q9NR77 195 aa8.09□□□□□ -1.11
COPS3-202ENST00000417352 THEGQ9P2T0 379 aa8.09□□□□□ -1.11
COPS3-202ENST00000417352 KIAA1217Q5T5P2 1943 aa8.09□□□□□ -1.11
COPS3-202ENST00000417352 PRUNE2Q8WUY3 3088 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 GCOM1H8Y6P7 765 aaPredicted RBP8.08□□□□□ -1.12
COPS3-202ENST00000417352 SMAPO00193 183 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 TNFRSF10AO00220 468 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 NOP56O00567 594 aaKnown RBP8.08□□□□□ -1.12
COPS3-202ENST00000417352 ZBTB5O15062 677 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 POLR2MP0CAP2 368 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 EDNRBP24530 442 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 CCND2P30279 289 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 SP4Q02446 784 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 PTPN11Q06124 597 aaPredicted RBP8.08□□□□□ -1.12
COPS3-202ENST00000417352 ARHGAP1Q07960 439 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 WTAPQ15007 396 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 KIAA0753Q2KHM9 967 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 TTC22Q5TAA0 569 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 LRRC8DQ7L1W4 858 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 CATIPQ7Z7H3 387 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 SPRYD3Q8NCJ5 442 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 ADAMTS19Q8TE59 1207 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 ATXN2LQ8WWM7 1075 aaKnown RBP8.08□□□□□ -1.12
COPS3-202ENST00000417352 ANKS1AQ92625 1134 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 ASB2Q96Q27 587 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 PIGSQ96S52 555 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 SLC9A7Q96T83 725 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 KATNAL1Q9BW62 490 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 RTEL1Q9NZ71 1219 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 HDAC6Q9UBN7 1215 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 DDX41Q9UJV9 622 aaKnown RBP8.08□□□□□ -1.12
COPS3-202ENST00000417352 LAMA4Q16363 1823 aa8.08□□□□□ -1.12
COPS3-202ENST00000417352 TCF20Q9UGU0 1960 aaKnown RBP8.08□□□□□ -1.12
COPS3-202ENST00000417352 BAZ2BQ9UIF8 2168 aaKnown RBP8.07□□□□□ -1.12
COPS3-202ENST00000417352 RBAK-RBAKDNI3L0D1 243 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 GGPS1O95749 300 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 CKBP12277 381 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 SELPP16109 830 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 THPOP40225 353 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 PRSS12P56730 875 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 ZNF200P98182 395 aaPredicted RBP8.07□□□□□ -1.12
COPS3-202ENST00000417352 TFF2Q03403 129 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 PTH1RQ03431 593 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 TRAF1Q13077 416 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 IKBKEQ14164 716 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 E2F4Q16254 413 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 KRT40Q6A162 431 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 CCDC62Q6P9F0 684 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 KCNV1Q6PIU1 500 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 Q6ZNB5 142 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 HERC6Q8IVU3 1022 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 NCOA7Q8NI08 942 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 SMARCC2Q8TAQ2 1214 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 CAGE1Q8TC20 777 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 CUL5Q93034 780 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 MAD2L2Q9UI95 211 aa8.07□□□□□ -1.12
COPS3-202ENST00000417352 GRXCR2A6NFK2 248 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 E7EWF7 191 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 PPP1R11O60927 126 aaPredicted RBP8.06□□□□□ -1.12
COPS3-202ENST00000417352 UPP2O95045 317 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 NT5C2P49902 561 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 HSD17B4P51659 736 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 PGM5Q15124 567 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 AAK1Q2M2I8 961 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 CELF3Q5SZQ8 465 aaKnown RBP8.06□□□□□ -1.12
COPS3-202ENST00000417352 ZNF618Q5T7W0 954 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 UTP14CQ5TAP6 766 aaKnown RBP8.06□□□□□ -1.12
COPS3-202ENST00000417352 CASC1Q6TDU7 716 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 EP400NLQ6ZTU2 488 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 CCDC82Q8N4S0 544 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 PPTC7Q8NI37 304 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 CTCFLQ8NI51 663 aaPredicted RBP8.06□□□□□ -1.12
COPS3-202ENST00000417352 PHOSPHO2Q8TCD6 241 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 AFAP1L1Q8TED9 768 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 KAT2BQ92831 832 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 ATP6V0A1Q93050 837 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 RRP36Q96EU6 259 aaKnown RBP8.06□□□□□ -1.12
COPS3-202ENST00000417352 UHRF1Q96T88 793 aaPredicted RBP8.06□□□□□ -1.12
COPS3-202ENST00000417352 PDCD2LQ9BRP1 358 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 MYL10Q9BUA6 226 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 IL25Q9H293 177 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 SENP2Q9HC62 589 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 SEC63Q9UGP8 760 aaKnown RBP8.06□□□□□ -1.12
COPS3-202ENST00000417352 GTF2IRD1Q9UHL9 959 aa8.06□□□□□ -1.12
COPS3-202ENST00000417352 SCN10AQ9Y5Y9 1956 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 PNMA6FA0A0J9YX94 578 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 C17orf102A2RUQ5 167 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 PALM3A6NDB9 673 aaPredicted RBP8.05□□□□□ -1.12
COPS3-202ENST00000417352 CCDC69A6NI79 296 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 RSPH10B2B2RC85 870 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 H3BRB1 525 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 PPFIA4O75335 1185 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 BAIAP3O94812 1187 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 CYP21A2P08686 494 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 CTSHP09668 335 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 RSPH10BP0C881 870 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 GSPT1P15170 499 aaKnown RBP8.05□□□□□ -1.12
COPS3-202ENST00000417352 CHMLP26374 656 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 KCNQ1P51787 676 aa8.05□□□□□ -1.12
COPS3-202ENST00000417352 WDR5P61964 334 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms