RNA–Protein interactions for RNA: ENST00000417239.1

SMIM12-201, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMIM12, Length 684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-201ENST00000417239 DDX41Q9UJV9 622 aaKnown RBP10.3□□□□□ -0.76
SMIM12-201ENST00000417239 BARX2Q9UMQ3 279 aaPredicted RBP10.3□□□□□ -0.76
SMIM12-201ENST00000417239 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.3□□□□□ -0.76
SMIM12-201ENST00000417239 WDR19Q8NEZ3 1342 aa10.3□□□□□ -0.76
SMIM12-201ENST00000417239 TSPY2A6NKD2 308 aa10.29□□□□□ -0.76
SMIM12-201ENST00000417239 APPP05067 770 aa10.29□□□□□ -0.76
SMIM12-201ENST00000417239 PPARAQ07869 468 aa10.29□□□□□ -0.76
SMIM12-201ENST00000417239 FRMD5Q7Z6J6 570 aa10.29□□□□□ -0.76
SMIM12-201ENST00000417239 ADSSL1Q8N142 457 aa10.29□□□□□ -0.76
SMIM12-201ENST00000417239 TMEM105Q8N8V8 129 aa10.29□□□□□ -0.76
SMIM12-201ENST00000417239 KBTBD3Q8NAB2 608 aa10.29□□□□□ -0.76
SMIM12-201ENST00000417239 SUSD6Q92537 303 aa10.29□□□□□ -0.76
SMIM12-201ENST00000417239 APBB2Q92870 758 aa10.29□□□□□ -0.76
SMIM12-201ENST00000417239 PLVAPQ9BX97 442 aa10.29□□□□□ -0.76
SMIM12-201ENST00000417239 PNMA2Q9UL42 364 aa10.29□□□□□ -0.76
SMIM12-201ENST00000417239 PLAGL2Q9UPG8 496 aa10.29□□□□□ -0.76
SMIM12-201ENST00000417239 FRMPD2Q68DX3 1309 aaPredicted RBP10.29□□□□□ -0.76
SMIM12-201ENST00000417239 DENND4AQ7Z401 1863 aa10.28□□□□□ -0.76
SMIM12-201ENST00000417239 PATL2C9JE40 543 aaKnown RBP10.28□□□□□ -0.76
SMIM12-201ENST00000417239 RAB11FIP3O75154 756 aa10.28□□□□□ -0.76
SMIM12-201ENST00000417239 CAND2O75155 1236 aa10.28□□□□□ -0.76
SMIM12-201ENST00000417239 CTSHP09668 335 aa10.28□□□□□ -0.76
SMIM12-201ENST00000417239 ATF7P17544 494 aaPredicted RBP10.28□□□□□ -0.76
SMIM12-201ENST00000417239 NRIP1P48552 1158 aa10.28□□□□□ -0.76
SMIM12-201ENST00000417239 LAMC2Q13753 1193 aa10.28□□□□□ -0.76
SMIM12-201ENST00000417239 MCTP2Q6DN12 878 aa10.28□□□□□ -0.76
SMIM12-201ENST00000417239 SIRT2Q8IXJ6 389 aa10.28□□□□□ -0.76
SMIM12-201ENST00000417239 RGS22Q8NE09 1264 aa10.28□□□□□ -0.76
SMIM12-201ENST00000417239 P2RX5Q93086 422 aa10.28□□□□□ -0.76
SMIM12-201ENST00000417239 NKD2Q969F2 451 aaPredicted RBP10.28□□□□□ -0.76
SMIM12-201ENST00000417239 PPP2R3CQ969Q6 453 aa10.28□□□□□ -0.76
SMIM12-201ENST00000417239 ZNF689Q96CS4 500 aaPredicted RBP10.28□□□□□ -0.76
SMIM12-201ENST00000417239 GPCPD1Q9NPB8 672 aa10.28□□□□□ -0.76
SMIM12-201ENST00000417239 COL20A1Q9P218 1284 aa10.28□□□□□ -0.76
SMIM12-201ENST00000417239 NCOR2Q9Y618 2525 aa10.28□□□□□ -0.76
SMIM12-201ENST00000417239 FANCMQ8IYD8 2048 aa10.28□□□□□ -0.76
SMIM12-201ENST00000417239 C17orf102A2RUQ5 167 aa10.27□□□□□ -0.77
SMIM12-201ENST00000417239 RNF113AO15541 343 aaKnown RBP10.27□□□□□ -0.77
SMIM12-201ENST00000417239 TREHO43280 583 aa10.27□□□□□ -0.77
SMIM12-201ENST00000417239 ITGB1P05556 798 aa10.27□□□□□ -0.77
SMIM12-201ENST00000417239 SLC3A2P08195 630 aaKnown RBP10.27□□□□□ -0.77
SMIM12-201ENST00000417239 STXBP2Q15833 593 aa10.27□□□□□ -0.77
SMIM12-201ENST00000417239 HSDL1Q3SXM5 330 aa10.27□□□□□ -0.77
SMIM12-201ENST00000417239 NSUN6Q8TEA1 469 aaKnown RBP10.27□□□□□ -0.77
SMIM12-201ENST00000417239 ATP6V0A1Q93050 837 aa10.27□□□□□ -0.77
SMIM12-201ENST00000417239 TAAR1Q96RJ0 339 aa10.27□□□□□ -0.77
SMIM12-201ENST00000417239 C16orf70Q9BSU1 422 aa10.27□□□□□ -0.77
SMIM12-201ENST00000417239 PPFIA4O75335 1185 aa10.26□□□□□ -0.77
SMIM12-201ENST00000417239 PDHBP11177 359 aa10.26□□□□□ -0.77
SMIM12-201ENST00000417239 BTG3Q14201 252 aaPredicted RBP10.26□□□□□ -0.77
SMIM12-201ENST00000417239 USH1GQ495M9 461 aa10.26□□□□□ -0.77
SMIM12-201ENST00000417239 FAM26DQ5JW98 314 aa10.26□□□□□ -0.77
SMIM12-201ENST00000417239 MYSM1Q5VVJ2 828 aa10.26□□□□□ -0.77
SMIM12-201ENST00000417239 RBM23Q86U06 439 aaKnown RBP10.26□□□□□ -0.77
SMIM12-201ENST00000417239 VN1R2Q8NFZ6 395 aa10.26□□□□□ -0.77
SMIM12-201ENST00000417239 SPPL3Q8TCT6 385 aa10.26□□□□□ -0.77
SMIM12-201ENST00000417239 SYTL5Q8TDW5 730 aaPredicted RBP10.26□□□□□ -0.77
SMIM12-201ENST00000417239 TBC1D5Q92609 795 aa10.26□□□□□ -0.77
SMIM12-201ENST00000417239 RMDN1Q96DB5 314 aa10.26□□□□□ -0.77
SMIM12-201ENST00000417239 IWS1Q96ST2 819 aa10.26□□□□□ -0.77
SMIM12-201ENST00000417239 NACAP1Q9BZK3 213 aa10.26□□□□□ -0.77
SMIM12-201ENST00000417239 MAF1Q9H063 256 aa10.26□□□□□ -0.77
SMIM12-201ENST00000417239 NAPBQ9H115 298 aa10.26□□□□□ -0.77
SMIM12-201ENST00000417239 PCDHGC5Q9Y5F6 944 aa10.26□□□□□ -0.77
SMIM12-201ENST00000417239 MRVI1Q9Y6F6 885 aa10.26□□□□□ -0.77
SMIM12-201ENST00000417239 MRPL42Q9Y6G3 142 aaKnown RBP10.26□□□□□ -0.77
SMIM12-201ENST00000417239 CHD6Q8TD26 2715 aa10.26□□□□□ -0.77
SMIM12-201ENST00000417239 FOXP2O15409 715 aa10.25□□□□□ -0.77
SMIM12-201ENST00000417239 DGKIO75912 1065 aa10.25□□□□□ -0.77
SMIM12-201ENST00000417239 ZFYP08048 801 aaPredicted RBP10.25□□□□□ -0.77
SMIM12-201ENST00000417239 SMIM10L2AP0DMW4 78 aa10.25□□□□□ -0.77
SMIM12-201ENST00000417239 SMIM10L2BP0DMW5 78 aa10.25□□□□□ -0.77
SMIM12-201ENST00000417239 RBM10P98175 930 aaKnown RBP10.25□□□□□ -0.77
SMIM12-201ENST00000417239 CTDSPL2Q05D32 466 aa10.25□□□□□ -0.77
SMIM12-201ENST00000417239 ZNF543Q08ER8 600 aa10.25□□□□□ -0.77
SMIM12-201ENST00000417239 NAALADL2Q58DX5 795 aa10.25□□□□□ -0.77
SMIM12-201ENST00000417239 ATP8B4Q8TF62 1192 aa10.25□□□□□ -0.77
SMIM12-201ENST00000417239 POF1BQ8WVV4 589 aa10.25□□□□□ -0.77
SMIM12-201ENST00000417239 SPATA33Q96N06 139 aa10.25□□□□□ -0.77
SMIM12-201ENST00000417239 RMDN3Q96TC7 470 aa10.25□□□□□ -0.77
SMIM12-201ENST00000417239 SEC62Q99442 399 aaKnown RBP10.25□□□□□ -0.77
SMIM12-201ENST00000417239 TMEM47Q9BQJ4 181 aa10.25□□□□□ -0.77
SMIM12-201ENST00000417239 RNPEPQ9H4A4 650 aa10.25□□□□□ -0.77
SMIM12-201ENST00000417239 LAMA4Q16363 1823 aa10.25□□□□□ -0.77
SMIM12-201ENST00000417239 H3BRB1 525 aa10.24□□□□□ -0.77
SMIM12-201ENST00000417239 SORBS3O60504 671 aa10.24□□□□□ -0.77
SMIM12-201ENST00000417239 RANBP6O60518 1105 aaKnown RBP10.24□□□□□ -0.77
SMIM12-201ENST00000417239 HMMRO75330 724 aa10.24□□□□□ -0.77
SMIM12-201ENST00000417239 EIF3JO75822 258 aaKnown RBP10.24□□□□□ -0.77
SMIM12-201ENST00000417239 BRD1O95696 1058 aa10.24□□□□□ -0.77
SMIM12-201ENST00000417239 SNHG28P0DPA3 235 aa10.24□□□□□ -0.77
SMIM12-201ENST00000417239 TOP1P11387 765 aaKnown RBP10.24□□□□□ -0.77
SMIM12-201ENST00000417239 EIF2AK2P19525 551 aaKnown RBP10.24□□□□□ -0.77
SMIM12-201ENST00000417239 CELF3Q5SZQ8 465 aaKnown RBP10.24□□□□□ -0.77
SMIM12-201ENST00000417239 ASTLQ6HA08 431 aaPredicted RBP10.24□□□□□ -0.77
SMIM12-201ENST00000417239 DGLUCYQ7Z3D6 616 aa10.24□□□□□ -0.77
SMIM12-201ENST00000417239 ZBTB33Q86T24 672 aa10.24□□□□□ -0.77
SMIM12-201ENST00000417239 UBALD2Q8IYN6 164 aa10.24□□□□□ -0.77
SMIM12-201ENST00000417239 CRIPAKQ8N1N5 446 aa10.24□□□□□ -0.77
SMIM12-201ENST00000417239 KLHL23Q8NBE8 558 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms