RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 STXBP2Q15833 593 aa9.14□□□□□ -0.95
MDC1-203ENST00000417033 CALCRLQ16602 461 aa9.14□□□□□ -0.95
MDC1-203ENST00000417033 Q4G0T1 1027 aa9.14□□□□□ -0.95
MDC1-203ENST00000417033 OLFML2BQ68BL8 750 aa9.14□□□□□ -0.95
MDC1-203ENST00000417033 PPP4R3AQ6IN85 833 aa9.14□□□□□ -0.95
MDC1-203ENST00000417033 TAPT1Q6NXT6 567 aa9.14□□□□□ -0.95
MDC1-203ENST00000417033 MOXD1Q6UVY6 613 aa9.14□□□□□ -0.95
MDC1-203ENST00000417033 LEO1Q8WVC0 666 aaPredicted RBP9.14□□□□□ -0.95
MDC1-203ENST00000417033 CLIC6Q96NY7 704 aa9.14□□□□□ -0.95
MDC1-203ENST00000417033 MTMR9Q96QG7 549 aa9.14□□□□□ -0.95
MDC1-203ENST00000417033 AGO4Q9HCK5 861 aaKnown RBP9.14□□□□□ -0.95
MDC1-203ENST00000417033 KCNMB3Q9NPA1 279 aa9.14□□□□□ -0.95
MDC1-203ENST00000417033 KCNH7Q9NS40 1196 aa9.14□□□□□ -0.95
MDC1-203ENST00000417033 POLR3EQ9NVU0 708 aa9.14□□□□□ -0.95
MDC1-203ENST00000417033 SLC5A4Q9NY91 659 aa9.14□□□□□ -0.95
MDC1-203ENST00000417033 PP2D1A8MPX8 630 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 SPATA31C2B4DYI2 1134 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 EIF3JO75822 258 aaKnown RBP9.13□□□□□ -0.95
MDC1-203ENST00000417033 XRCC5P13010 732 aaKnown RBP9.13□□□□□ -0.95
MDC1-203ENST00000417033 CYBAP13498 195 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 KCNA2P16389 499 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 UBA1P22314 1058 aaKnown RBP9.13□□□□□ -0.95
MDC1-203ENST00000417033 HOXD10P28358 340 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 CCND3P30281 292 aaPredicted RBP9.13□□□□□ -0.95
MDC1-203ENST00000417033 SP4Q02446 784 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 CACNB2Q08289 660 aaPredicted RBP9.13□□□□□ -0.95
MDC1-203ENST00000417033 ACVR2BQ13705 512 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 SLC39A14Q15043 492 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 STK38Q15208 465 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 E2F4Q16254 413 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 LY6KQ17RY6 165 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 SPECC1Q5M775 1068 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 XRRA1Q6P2D8 792 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 CCDC62Q6P9F0 684 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 RAET1EQ8TD07 263 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 SH3TC2Q8TF17 1288 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 GPRASP2Q96D09 838 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 VTA1Q9NP79 307 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 FBXO2Q9UK22 296 aaPredicted RBP9.13□□□□□ -0.95
MDC1-203ENST00000417033 PTPN22Q9Y2R2 807 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 TCHHQ07283 1943 aa9.13□□□□□ -0.95
MDC1-203ENST00000417033 LOC102724159A0A0B4J2E5 919 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 RBM47A0AV96 593 aaKnown RBP9.12□□□□□ -0.95
MDC1-203ENST00000417033 POTEMA6NI47 508 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 EML1O00423 815 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 SPTLC2O15270 562 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 DHX15O43143 795 aaKnown RBP9.12□□□□□ -0.95
MDC1-203ENST00000417033 GADD45BO75293 160 aaPredicted RBP9.12□□□□□ -0.95
MDC1-203ENST00000417033 PSMD10O75832 226 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 YEATS4O95619 227 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 CCNE2O96020 404 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 MYCP01106 439 aaPredicted RBP9.12□□□□□ -0.95
MDC1-203ENST00000417033 INHAP05111 366 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 SMPD1P17405 629 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 CDC25AP30304 524 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 ICAM3P32942 547 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 TXKP42681 527 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 SETQ01105 290 aaPredicted RBP9.12□□□□□ -0.95
MDC1-203ENST00000417033 SPIRE1Q08AE8 756 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 PWP2Q15269 919 aaKnown RBP9.12□□□□□ -0.95
MDC1-203ENST00000417033 CCDC144BQ3MJ40 725 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 PPP1R15BQ5SWA1 713 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 MFSD14CQ5VZR4 134 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 USP49Q70CQ1 688 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 NIPA1Q7RTP0 329 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 NLRX1Q86UT6 975 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 SLC5A5Q92911 643 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 SPATA32Q96LK8 384 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 ZNF577Q9BSK1 485 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 UNC45AQ9H3U1 944 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 DDX41Q9UJV9 622 aaKnown RBP9.12□□□□□ -0.95
MDC1-203ENST00000417033 RCOR1Q9UKL0 485 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 VAV3Q9UKW4 847 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 ATP6V1DQ9Y5K8 247 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 DOCK5Q9H7D0 1870 aa9.12□□□□□ -0.95
MDC1-203ENST00000417033 KIAA1217Q5T5P2 1943 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 VWA3AA6NCI4 1184 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 MYADML2A6NDP7 307 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 IPO5O00410 1097 aaKnown RBP9.11□□□□□ -0.95
MDC1-203ENST00000417033 CHMP2AO43633 222 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 STAM2O75886 525 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 GGPS1O95749 300 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 GNRH1P01148 92 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 HMGCRP04035 888 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 TXNP10599 105 aaKnown RBP9.11□□□□□ -0.95
MDC1-203ENST00000417033 GRK4P32298 578 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 TECP42680 631 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 GNPTABQ3T906 1256 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 AXDND1Q5T1B0 1012 aaPredicted RBP9.11□□□□□ -0.95
MDC1-203ENST00000417033 MAP3K21Q5TCX8 1036 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 LRCH2Q5VUJ6 765 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 B3GNT9Q6UX72 402 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 CLEC17AQ6ZS10 378 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 CTU1Q7Z7A3 348 aaKnown RBP9.11□□□□□ -0.95
MDC1-203ENST00000417033 MSL3Q8N5Y2 521 aaKnown RBP9.11□□□□□ -0.95
MDC1-203ENST00000417033 NAP1L4Q99733 375 aaKnown RBP9.11□□□□□ -0.95
MDC1-203ENST00000417033 CSRNP2Q9H175 543 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 ABHD16BQ9H3Z7 469 aa9.11□□□□□ -0.95
MDC1-203ENST00000417033 TTC12Q9H892 705 aaPredicted RBP9.11□□□□□ -0.95
MDC1-203ENST00000417033 PCDHA7Q9UN72 937 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms