RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 PIBF1Q8WXW3 757 aa14.98□□□□□ -0.01
LINC00339-202ENST00000416769 PCDHA1Q9Y5I3 950 aa14.98□□□□□ -0.01
LINC00339-202ENST00000416769 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.97□□□□□ -0.01
LINC00339-202ENST00000416769 RSPH10B2B2RC85 870 aa14.97□□□□□ -0.01
LINC00339-202ENST00000416769 ZBTB5O15062 677 aa14.97□□□□□ -0.01
LINC00339-202ENST00000416769 UPP2O95045 317 aa14.97□□□□□ -0.01
LINC00339-202ENST00000416769 LGALS2P05162 132 aa14.97□□□□□ -0.01
LINC00339-202ENST00000416769 RSPH10BP0C881 870 aa14.97□□□□□ -0.01
LINC00339-202ENST00000416769 SMIM10L2AP0DMW4 78 aa14.97□□□□□ -0.01
LINC00339-202ENST00000416769 SMIM10L2BP0DMW5 78 aa14.97□□□□□ -0.01
LINC00339-202ENST00000416769 HTRA4P83105 476 aaPredicted RBP14.97□□□□□ -0.01
LINC00339-202ENST00000416769 IFIT1BQ5T764 474 aaKnown RBP14.97□□□□□ -0.01
LINC00339-202ENST00000416769 STOX1Q6ZVD7 989 aa14.97□□□□□ -0.01
LINC00339-202ENST00000416769 TICAM2Q86XR7 235 aa14.97□□□□□ -0.01
LINC00339-202ENST00000416769 UBAC1Q9BSL1 405 aa14.97□□□□□ -0.01
LINC00339-202ENST00000416769 DSCC1Q9BVC3 393 aa14.97□□□□□ -0.01
LINC00339-202ENST00000416769 KATNAL1Q9BW62 490 aa14.97□□□□□ -0.01
LINC00339-202ENST00000416769 PALM3A6NDB9 673 aaPredicted RBP14.96□□□□□ -0.01
LINC00339-202ENST00000416769 CSPG5O95196 566 aa14.96□□□□□ -0.01
LINC00339-202ENST00000416769 HOXC8P31273 242 aa14.96□□□□□ -0.01
LINC00339-202ENST00000416769 MRPS9P82933 396 aaKnown RBP14.96□□□□□ -0.01
LINC00339-202ENST00000416769 SP4Q02446 784 aa14.96□□□□□ -0.01
LINC00339-202ENST00000416769 LEXMQ3ZCV2 418 aa14.96□□□□□ -0.01
LINC00339-202ENST00000416769 PLEKHG4Q58EX7 1191 aa14.96□□□□□ -0.01
LINC00339-202ENST00000416769 FAM178BQ8IXR5 827 aa14.96□□□□□ -0.01
LINC00339-202ENST00000416769 SP7Q8TDD2 431 aaPredicted RBP14.96□□□□□ -0.01
LINC00339-202ENST00000416769 ATP6V0A1Q93050 837 aa14.96□□□□□ -0.01
LINC00339-202ENST00000416769 RNPEPQ9H4A4 650 aa14.96□□□□□ -0.01
LINC00339-202ENST00000416769 SETD4Q9NVD3 440 aa14.96□□□□□ -0.01
LINC00339-202ENST00000416769 RTEL1Q9NZ71 1219 aa14.96□□□□□ -0.01
LINC00339-202ENST00000416769 LMCD1Q9NZU5 365 aa14.96□□□□□ -0.01
LINC00339-202ENST00000416769 PIEZO1Q92508 2521 aa14.96□□□□□ -0.02
LINC00339-202ENST00000416769 C17orf102A2RUQ5 167 aa14.95□□□□□ -0.02
LINC00339-202ENST00000416769 PI4K2BG5E9Z4 385 aa14.95□□□□□ -0.02
LINC00339-202ENST00000416769 PPFIA4O75335 1185 aa14.95□□□□□ -0.02
LINC00339-202ENST00000416769 GSPT1P15170 499 aaKnown RBP14.95□□□□□ -0.02
LINC00339-202ENST00000416769 MFAP1P55081 439 aaKnown RBP14.95□□□□□ -0.02
LINC00339-202ENST00000416769 COL9A3Q14050 684 aaPredicted RBP14.95□□□□□ -0.02
LINC00339-202ENST00000416769 IMMTQ16891 758 aaKnown RBP14.95□□□□□ -0.02
LINC00339-202ENST00000416769 EPC2Q52LR7 807 aa14.95□□□□□ -0.02
LINC00339-202ENST00000416769 BMP2KLQ5H9B9 411 aa14.95□□□□□ -0.02
LINC00339-202ENST00000416769 TCEAL5Q5H9L2 206 aa14.95□□□□□ -0.02
LINC00339-202ENST00000416769 PTCRAQ6ISU1 281 aaPredicted RBP14.95□□□□□ -0.02
LINC00339-202ENST00000416769 GJD3Q8N144 294 aa14.95□□□□□ -0.02
LINC00339-202ENST00000416769 ZBTB10Q96DT7 871 aa14.95□□□□□ -0.02
LINC00339-202ENST00000416769 C5orf42Q9H799 3197 aa14.94□□□□□ -0.02
LINC00339-202ENST00000416769 H3BRB1 525 aa14.94□□□□□ -0.02
LINC00339-202ENST00000416769 GPR37L1O60883 481 aa14.94□□□□□ -0.02
LINC00339-202ENST00000416769 PARNO95453 639 aaKnown RBP14.94□□□□□ -0.02
LINC00339-202ENST00000416769 AMHP03971 560 aa14.94□□□□□ -0.02
LINC00339-202ENST00000416769 PTH1RQ03431 593 aa14.94□□□□□ -0.02
LINC00339-202ENST00000416769 GRM4Q14833 912 aa14.94□□□□□ -0.02
LINC00339-202ENST00000416769 CCDC178Q5BJE1 867 aa14.94□□□□□ -0.02
LINC00339-202ENST00000416769 RUFY4Q6ZNE9 571 aa14.94□□□□□ -0.02
LINC00339-202ENST00000416769 KRT23Q9C075 422 aa14.94□□□□□ -0.02
LINC00339-202ENST00000416769 TUT1Q9H6E5 874 aaKnown RBP14.94□□□□□ -0.02
LINC00339-202ENST00000416769 MLXIPQ9HAP2 919 aa14.94□□□□□ -0.02
LINC00339-202ENST00000416769 HCN4Q9Y3Q4 1203 aa14.94□□□□□ -0.02
LINC00339-202ENST00000416769 INSL6Q9Y581 213 aa14.94□□□□□ -0.02
LINC00339-202ENST00000416769 COL4A6Q14031 1691 aa14.93□□□□□ -0.02
LINC00339-202ENST00000416769 GCOM1H8Y6P7 765 aaPredicted RBP14.93□□□□□ -0.02
LINC00339-202ENST00000416769 LINC00271P0C7V0 271 aa14.93□□□□□ -0.02
LINC00339-202ENST00000416769 POLR2MP0CAP2 368 aa14.93□□□□□ -0.02
LINC00339-202ENST00000416769 CCND2P30279 289 aa14.93□□□□□ -0.02
LINC00339-202ENST00000416769 SSTR3P32745 418 aaPredicted RBP14.93□□□□□ -0.02
LINC00339-202ENST00000416769 UTP14CQ5TAP6 766 aaKnown RBP14.93□□□□□ -0.02
LINC00339-202ENST00000416769 EP400NLQ6ZTU2 488 aa14.93□□□□□ -0.02
LINC00339-202ENST00000416769 CYFIP1Q7L576 1253 aa14.93□□□□□ -0.02
LINC00339-202ENST00000416769 MRPL38Q96DV4 380 aaKnown RBP14.93□□□□□ -0.02
LINC00339-202ENST00000416769 YME1L1Q96TA2 773 aa14.93□□□□□ -0.02
LINC00339-202ENST00000416769 GPR20Q99678 358 aa14.93□□□□□ -0.02
LINC00339-202ENST00000416769 MAF1Q9H063 256 aa14.93□□□□□ -0.02
LINC00339-202ENST00000416769 RIOX1Q9H6W3 641 aa14.93□□□□□ -0.02
LINC00339-202ENST00000416769 GRXCR2A6NFK2 248 aa14.92□□□□□ -0.02
LINC00339-202ENST00000416769 EFCAB14O75071 495 aa14.92□□□□□ -0.02
LINC00339-202ENST00000416769 CYP21A2P08686 494 aa14.92□□□□□ -0.02
LINC00339-202ENST00000416769 GTF2F1P35269 517 aaKnown RBP eCLIP14.92□□□□□ -0.02
LINC00339-202ENST00000416769 ANTXR2P58335 489 aa14.92□□□□□ -0.02
LINC00339-202ENST00000416769 GPM6BQ13491 265 aa14.92□□□□□ -0.02
LINC00339-202ENST00000416769 CLUL1Q15846 466 aa14.92□□□□□ -0.02
LINC00339-202ENST00000416769 TMEM192Q8IY95 271 aa14.92□□□□□ -0.02
LINC00339-202ENST00000416769 NEK9Q8TD19 979 aa14.92□□□□□ -0.02
LINC00339-202ENST00000416769 LMBR1Q8WVP7 490 aa14.92□□□□□ -0.02
LINC00339-202ENST00000416769 TOP1MTQ969P6 601 aa14.92□□□□□ -0.02
LINC00339-202ENST00000416769 MYL10Q9BUA6 226 aa14.92□□□□□ -0.02
LINC00339-202ENST00000416769 FRMPD4Q14CM0 1322 aa14.92□□□□□ -0.02
LINC00339-202ENST00000416769 EMSYQ7Z589 1322 aa14.92□□□□□ -0.02
LINC00339-202ENST00000416769 CHRNA1P02708 482 aa14.91□□□□□ -0.02
LINC00339-202ENST00000416769 ADAM17P78536 824 aa14.91□□□□□ -0.02
LINC00339-202ENST00000416769 DLX2Q07687 328 aaPredicted RBP14.91□□□□□ -0.02
LINC00339-202ENST00000416769 USP17L6PQ6QN14 398 aa14.91□□□□□ -0.02
LINC00339-202ENST00000416769 BANK1Q8NDB2 785 aa14.91□□□□□ -0.02
LINC00339-202ENST00000416769 SEPT8Q92599 483 aa14.91□□□□□ -0.02
LINC00339-202ENST00000416769 INPP4AQ96PE3 977 aaPredicted RBP14.91□□□□□ -0.02
LINC00339-202ENST00000416769 IFIH1Q9BYX4 1025 aaKnown RBP14.91□□□□□ -0.02
LINC00339-202ENST00000416769 CNNM2Q9H8M5 875 aa14.91□□□□□ -0.02
LINC00339-202ENST00000416769 KAT6AQ92794 2004 aa14.91□□□□□ -0.02
LINC00339-202ENST00000416769 SPATA31C2B4DYI2 1134 aa14.9□□□□□ -0.02
LINC00339-202ENST00000416769 H3BNC9 293 aa14.9□□□□□ -0.02
LINC00339-202ENST00000416769 HIP1O00291 1037 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms